RNA–Protein interactions for RNA: ENST00000514494.1

PPARGC1A-213, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 4

Gene PPARGC1A, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-213ENST00000514494 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
PPARGC1A-213ENST00000514494 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
PPARGC1A-213ENST00000514494 ADGRD1Q6QNK2 874 aa13.2□□□□□ -0.3
PPARGC1A-213ENST00000514494 MAP3K7O43318 606 aa13.19□□□□□ -0.3
PPARGC1A-213ENST00000514494 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
PPARGC1A-213ENST00000514494 TK2O00142 265 aa13.17□□□□□ -0.3
PPARGC1A-213ENST00000514494 STAC3Q96MF2 364 aa13.17□□□□□ -0.3
PPARGC1A-213ENST00000514494 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
PPARGC1A-213ENST00000514494 C6orf132Q5T0Z8 1188 aa13.16□□□□□ -0.3
PPARGC1A-213ENST00000514494 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.3
PPARGC1A-213ENST00000514494 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
PPARGC1A-213ENST00000514494 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
PPARGC1A-213ENST00000514494 COL9A1P20849 921 aa13.11□□□□□ -0.31
PPARGC1A-213ENST00000514494 RNF166Q96A37 237 aaPredicted RBP13.11□□□□□ -0.31
PPARGC1A-213ENST00000514494 VPS9D1Q9Y2B5 631 aa13.11□□□□□ -0.31
PPARGC1A-213ENST00000514494 MLLT3P42568 568 aaPredicted RBP13.1□□□□□ -0.31
PPARGC1A-213ENST00000514494 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
PPARGC1A-213ENST00000514494 SLC4A5Q9BY07 1137 aa13.1□□□□□ -0.31
PPARGC1A-213ENST00000514494 OSBPP22059 807 aa13.09□□□□□ -0.31
PPARGC1A-213ENST00000514494 SEMA3EO15041 775 aa13.08□□□□□ -0.32
PPARGC1A-213ENST00000514494 PROX2Q3B8N5 592 aa13.07□□□□□ -0.32
PPARGC1A-213ENST00000514494 HRO43593 1189 aa13.06□□□□□ -0.32
PPARGC1A-213ENST00000514494 PRIM1P49642 420 aaKnown RBP13.06□□□□□ -0.32
PPARGC1A-213ENST00000514494 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
PPARGC1A-213ENST00000514494 MRPL50Q8N5N7 158 aaKnown RBP13.02□□□□□ -0.33
PPARGC1A-213ENST00000514494 GOLGA8CPA6NN73 597 aa13.01□□□□□ -0.33
PPARGC1A-213ENST00000514494 CERKQ8TCT0 537 aa13.01□□□□□ -0.33
PPARGC1A-213ENST00000514494 CDHR5Q9HBB8 845 aa13.01□□□□□ -0.33
PPARGC1A-213ENST00000514494 RABGEF1Q9UJ41 708 aa13□□□□□ -0.33
PPARGC1A-213ENST00000514494 TRIM6-TRIM34B2RNG4 842 aa12.99□□□□□ -0.33
PPARGC1A-213ENST00000514494 SMYD5Q6GMV2 418 aa12.99□□□□□ -0.33
PPARGC1A-213ENST00000514494 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
PPARGC1A-213ENST00000514494 TESPA1A2RU30 521 aaPredicted RBP12.97□□□□□ -0.33
PPARGC1A-213ENST00000514494 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
PPARGC1A-213ENST00000514494 BHMG1C9JSJ3 638 aaPredicted RBP12.96□□□□□ -0.33
PPARGC1A-213ENST00000514494 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
PPARGC1A-213ENST00000514494 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
PPARGC1A-213ENST00000514494 ONECUT3O60422 494 aaPredicted RBP12.95□□□□□ -0.34
PPARGC1A-213ENST00000514494 PRSS12P56730 875 aa12.95□□□□□ -0.34
PPARGC1A-213ENST00000514494 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
PPARGC1A-213ENST00000514494 SEPT9Q9UHD8 586 aaPredicted RBP12.93□□□□□ -0.34
PPARGC1A-213ENST00000514494 TSKSQ9UJT2 592 aa12.92□□□□□ -0.34
PPARGC1A-213ENST00000514494 TULP1O00294 542 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1A-213ENST00000514494 WNT2BQ93097 391 aa12.9□□□□□ -0.34
PPARGC1A-213ENST00000514494 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
PPARGC1A-213ENST00000514494 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
PPARGC1A-213ENST00000514494 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
PPARGC1A-213ENST00000514494 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
PPARGC1A-213ENST00000514494 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
PPARGC1A-213ENST00000514494 PADI6Q6TGC4 694 aa12.87□□□□□ -0.35
PPARGC1A-213ENST00000514494 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
PPARGC1A-213ENST00000514494 PTGDRQ13258 359 aa12.86□□□□□ -0.35
PPARGC1A-213ENST00000514494 HCSTQ9UBK5 93 aa12.86□□□□□ -0.35
PPARGC1A-213ENST00000514494 FAM198AQ9UFP1 575 aa12.86□□□□□ -0.35
PPARGC1A-213ENST00000514494 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
PPARGC1A-213ENST00000514494 SMAPO00193 183 aa12.85□□□□□ -0.35
PPARGC1A-213ENST00000514494 FCHSD2O94868 740 aa12.85□□□□□ -0.35
PPARGC1A-213ENST00000514494 PTPN5P54829 565 aa12.85□□□□□ -0.35
PPARGC1A-213ENST00000514494 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
PPARGC1A-213ENST00000514494 ZFRQ96KR1 1074 aaKnown RBP12.84□□□□□ -0.35
PPARGC1A-213ENST00000514494 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
PPARGC1A-213ENST00000514494 TATDN2Q93075 761 aa12.83□□□□□ -0.36
PPARGC1A-213ENST00000514494 NUDT18Q6ZVK8 323 aa12.82□□□□□ -0.36
PPARGC1A-213ENST00000514494 SLC24A1O60721 1099 aa12.79□□□□□ -0.36
PPARGC1A-213ENST00000514494 BCAMP50895 628 aa12.78□□□□□ -0.36
PPARGC1A-213ENST00000514494 GPIHBP1Q8IV16 184 aa12.78□□□□□ -0.36
PPARGC1A-213ENST00000514494 TTC13Q8NBP0 860 aa12.78□□□□□ -0.36
PPARGC1A-213ENST00000514494 C3orf80F5H4A9 247 aa12.77□□□□□ -0.37
PPARGC1A-213ENST00000514494 HIC1Q14526 733 aa12.77□□□□□ -0.37
PPARGC1A-213ENST00000514494 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
PPARGC1A-213ENST00000514494 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.77□□□□□ -0.37
PPARGC1A-213ENST00000514494 SOWAHBA6NEL2 793 aa12.75□□□□□ -0.37
PPARGC1A-213ENST00000514494 HDGFP51858 240 aaKnown RBP12.75□□□□□ -0.37
PPARGC1A-213ENST00000514494 SAMD7Q7Z3H4 446 aa12.73□□□□□ -0.37
PPARGC1A-213ENST00000514494 GNPATO15228 680 aa12.72□□□□□ -0.37
PPARGC1A-213ENST00000514494 RBM46Q8TBY0 533 aaKnown RBP12.72□□□□□ -0.37
PPARGC1A-213ENST00000514494 RNF40O75150 1001 aa12.71□□□□□ -0.37
PPARGC1A-213ENST00000514494 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
PPARGC1A-213ENST00000514494 HPS5Q9UPZ3 1129 aa12.71□□□□□ -0.37
PPARGC1A-213ENST00000514494 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
PPARGC1A-213ENST00000514494 GPR37O15354 613 aa12.68□□□□□ -0.38
PPARGC1A-213ENST00000514494 EYA1Q99502 592 aa12.68□□□□□ -0.38
PPARGC1A-213ENST00000514494 TSR3Q9UJK0 312 aaKnown RBP12.68□□□□□ -0.38
PPARGC1A-213ENST00000514494 SLC4A3P48751 1232 aa12.67□□□□□ -0.38
PPARGC1A-213ENST00000514494 WBP1LQ9NX94 342 aa12.67□□□□□ -0.38
PPARGC1A-213ENST00000514494 PPP4CP60510 307 aa12.66□□□□□ -0.38
PPARGC1A-213ENST00000514494 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
PPARGC1A-213ENST00000514494 OATP04181 439 aa12.65□□□□□ -0.38
PPARGC1A-213ENST00000514494 FECHP22830 423 aa12.65□□□□□ -0.38
PPARGC1A-213ENST00000514494 DNAJB2P25686 324 aa12.65□□□□□ -0.38
PPARGC1A-213ENST00000514494 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
PPARGC1A-213ENST00000514494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
PPARGC1A-213ENST00000514494 PLA2G2EQ9NZK7 142 aa12.64□□□□□ -0.39
PPARGC1A-213ENST00000514494 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
PPARGC1A-213ENST00000514494 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
PPARGC1A-213ENST00000514494 RCCD1A6NED2 376 aa12.62□□□□□ -0.39
PPARGC1A-213ENST00000514494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.59□□□□□ -0.39
PPARGC1A-213ENST00000514494 PXYLP1Q8TE99 480 aa12.59□□□□□ -0.39
PPARGC1A-213ENST00000514494 METTL3Q86U44 580 aaKnown RBP12.58□□□□□ -0.4
PPARGC1A-213ENST00000514494 NECTIN2Q92692 538 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms