RNA–Protein interactions for RNA: ENST00000514494.1

PPARGC1A-213, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 4

Gene PPARGC1A, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-213ENST00000514494 AEBP2Q6ZN18 517 aaPredicted RBP30.62■■■□□ 2.49
PPARGC1A-213ENST00000514494 CHIC1Q5VXU3 224 aa29.67■■■□□ 2.34
PPARGC1A-213ENST00000514494 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
PPARGC1A-213ENST00000514494 PHF23Q9BUL5 403 aaPredicted RBP26.03■■□□□ 1.76
PPARGC1A-213ENST00000514494 FOXD1Q16676 465 aa24.21■■□□□ 1.47
PPARGC1A-213ENST00000514494 PLPPR3Q6T4P5 718 aa24.02■■□□□ 1.44
PPARGC1A-213ENST00000514494 ADRA2BP18089 450 aa23.08■■□□□ 1.29
PPARGC1A-213ENST00000514494 PPP6R1Q9UPN7 881 aa23.07■■□□□ 1.28
PPARGC1A-213ENST00000514494 PIAS4Q8N2W9 510 aaPredicted RBP22.85■■□□□ 1.25
PPARGC1A-213ENST00000514494 MSH5O43196 834 aa22.49■■□□□ 1.19
PPARGC1A-213ENST00000514494 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
PPARGC1A-213ENST00000514494 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
PPARGC1A-213ENST00000514494 MAPK8IP2Q13387 824 aaPredicted RBP21.01■□□□□ 0.95
PPARGC1A-213ENST00000514494 POTEDQ86YR6 584 aa20.93■□□□□ 0.94
PPARGC1A-213ENST00000514494 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
PPARGC1A-213ENST00000514494 CNKSR2Q8WXI2 1034 aa20.6■□□□□ 0.89
PPARGC1A-213ENST00000514494 NCBP3Q53F19 620 aaKnown RBP20.54■□□□□ 0.88
PPARGC1A-213ENST00000514494 KCNA4P22459 653 aa20.31■□□□□ 0.84
PPARGC1A-213ENST00000514494 RNF216Q9NWF9 866 aaPredicted RBP20.24■□□□□ 0.83
PPARGC1A-213ENST00000514494 HOXD11P31277 338 aaPredicted RBP20.19■□□□□ 0.82
PPARGC1A-213ENST00000514494 NPM3O75607 178 aaKnown RBP20.17■□□□□ 0.82
PPARGC1A-213ENST00000514494 DCAF8L1A6NGE4 600 aa20.03■□□□□ 0.8
PPARGC1A-213ENST00000514494 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
PPARGC1A-213ENST00000514494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.699e-7■■□□□ 14.3
PPARGC1A-213ENST00000514494 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
PPARGC1A-213ENST00000514494 RNF39Q9H2S5 420 aa19.2■□□□□ 0.66
PPARGC1A-213ENST00000514494 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
PPARGC1A-213ENST00000514494 CACNB1Q02641 598 aaPredicted RBP19■□□□□ 0.63
PPARGC1A-213ENST00000514494 C1QBPQ07021 282 aaKnown RBP18.98■□□□□ 0.63
PPARGC1A-213ENST00000514494 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
PPARGC1A-213ENST00000514494 FOXD4L1Q9NU39 408 aa18.8■□□□□ 0.6
PPARGC1A-213ENST00000514494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
PPARGC1A-213ENST00000514494 MYCNP04198 464 aaPredicted RBP18.68■□□□□ 0.58
PPARGC1A-213ENST00000514494 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
PPARGC1A-213ENST00000514494 ZBTB22O15209 634 aa18.64■□□□□ 0.57
PPARGC1A-213ENST00000514494 APLP2Q06481 763 aa18.58■□□□□ 0.56
PPARGC1A-213ENST00000514494 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
PPARGC1A-213ENST00000514494 CAPN15O75808 1086 aa18.53■□□□□ 0.56
PPARGC1A-213ENST00000514494 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
PPARGC1A-213ENST00000514494 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
PPARGC1A-213ENST00000514494 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
PPARGC1A-213ENST00000514494 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
PPARGC1A-213ENST00000514494 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
PPARGC1A-213ENST00000514494 DSG3P32926 999 aa18.18■□□□□ 0.5
PPARGC1A-213ENST00000514494 ABCB7O75027 752 aa18.14■□□□□ 0.49
PPARGC1A-213ENST00000514494 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
PPARGC1A-213ENST00000514494 ATXN8OSP0DMR3 200 aa18.13■□□□□ 0.49
PPARGC1A-213ENST00000514494 POLA2Q14181 598 aa17.96■□□□□ 0.47
PPARGC1A-213ENST00000514494 ZBTB12Q9Y330 459 aaPredicted RBP17.67■□□□□ 0.42
PPARGC1A-213ENST00000514494 FBLN2P98095 1184 aa17.52■□□□□ 0.4
PPARGC1A-213ENST00000514494 RBM42Q9BTD8 480 aaKnown RBP17.41■□□□□ 0.38
PPARGC1A-213ENST00000514494 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
PPARGC1A-213ENST00000514494 MKRN4PQ13434 485 aaPredicted RBP17.33■□□□□ 0.36
PPARGC1A-213ENST00000514494 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
PPARGC1A-213ENST00000514494 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
PPARGC1A-213ENST00000514494 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
PPARGC1A-213ENST00000514494 AKT1S1Q96B36 256 aa17.1■□□□□ 0.33
PPARGC1A-213ENST00000514494 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
PPARGC1A-213ENST00000514494 SSUH2Q9Y2M2 353 aa16.93■□□□□ 0.3
PPARGC1A-213ENST00000514494 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
PPARGC1A-213ENST00000514494 SPDYE4A6NLX3 237 aa16.89■□□□□ 0.29
PPARGC1A-213ENST00000514494 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
PPARGC1A-213ENST00000514494 CHRDL2Q6WN34 429 aa16.76■□□□□ 0.27
PPARGC1A-213ENST00000514494 PITPNM1O00562 1244 aa16.74■□□□□ 0.27
PPARGC1A-213ENST00000514494 SPDYE1Q8NFV5 336 aaPredicted RBP16.73■□□□□ 0.27
PPARGC1A-213ENST00000514494 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
PPARGC1A-213ENST00000514494 FKBP8Q14318 412 aa16.67■□□□□ 0.26
PPARGC1A-213ENST00000514494 POTEHQ6S545 545 aa16.55■□□□□ 0.24
PPARGC1A-213ENST00000514494 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
PPARGC1A-213ENST00000514494 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
PPARGC1A-213ENST00000514494 PIP4P2Q8N4L2 257 aa16.48■□□□□ 0.23
PPARGC1A-213ENST00000514494 PROM2Q8N271 834 aa16.45■□□□□ 0.22
PPARGC1A-213ENST00000514494 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.22
PPARGC1A-213ENST00000514494 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
PPARGC1A-213ENST00000514494 CHADLQ6NUI6 762 aa16.29■□□□□ 0.2
PPARGC1A-213ENST00000514494 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
PPARGC1A-213ENST00000514494 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
PPARGC1A-213ENST00000514494 HAX1O00165 279 aa16.09■□□□□ 0.17
PPARGC1A-213ENST00000514494 PLEKHG5O94827 1062 aa16.09■□□□□ 0.17
PPARGC1A-213ENST00000514494 MIER1Q8N108 512 aa16.09■□□□□ 0.17
PPARGC1A-213ENST00000514494 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
PPARGC1A-213ENST00000514494 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
PPARGC1A-213ENST00000514494 NPM1P06748 294 aaKnown RBP eCLIP15.96■□□□□ 0.15
PPARGC1A-213ENST00000514494 VASPP50552 380 aaPredicted RBP15.91■□□□□ 0.14
PPARGC1A-213ENST00000514494 C19orf67A6NJJ6 358 aa15.9■□□□□ 0.14
PPARGC1A-213ENST00000514494 MNX1P50219 401 aaPredicted RBP15.89■□□□□ 0.13
PPARGC1A-213ENST00000514494 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
PPARGC1A-213ENST00000514494 CD44P16070 742 aaKnown RBP15.87■□□□□ 0.13
PPARGC1A-213ENST00000514494 EVX2Q03828 476 aa15.82■□□□□ 0.12
PPARGC1A-213ENST00000514494 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
PPARGC1A-213ENST00000514494 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
PPARGC1A-213ENST00000514494 SP7Q8TDD2 431 aaPredicted RBP15.79■□□□□ 0.12
PPARGC1A-213ENST00000514494 ZRANB1Q9UGI0 708 aa15.75■□□□□ 0.11
PPARGC1A-213ENST00000514494 TSPYL2Q9H2G4 693 aaPredicted RBP15.69■□□□□ 0.1
PPARGC1A-213ENST00000514494 RASEFQ8IZ41 740 aa15.64■□□□□ 0.09
PPARGC1A-213ENST00000514494 IFNLR1Q8IU57 520 aaPredicted RBP15.63■□□□□ 0.09
PPARGC1A-213ENST00000514494 NUBP1P53384 320 aa15.61■□□□□ 0.09
PPARGC1A-213ENST00000514494 ZNF579Q8NAF0 562 aaKnown RBP15.6■□□□□ 0.09
PPARGC1A-213ENST00000514494 FAM212AQ96EL1 285 aa15.59■□□□□ 0.09
PPARGC1A-213ENST00000514494 SPOCK2Q92563 424 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms