RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 MYT1Q01538 1121 aa8□□□□□ -1.13
SMARCAD1-208ENST00000514232 TJAP1Q5JTD0 557 aa8□□□□□ -1.13
SMARCAD1-208ENST00000514232 ANO8Q9HCE9 1232 aaPredicted RBP8□□□□□ -1.13
SMARCAD1-208ENST00000514232 TRIM67Q6ZTA4 783 aa7.98□□□□□ -1.13
SMARCAD1-208ENST00000514232 TSR3Q9UJK0 312 aaKnown RBP7.98□□□□□ -1.13
SMARCAD1-208ENST00000514232 UPF1Q92900 1129 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMARCAD1-208ENST00000514232 COL9A1P20849 921 aa7.96□□□□□ -1.14
SMARCAD1-208ENST00000514232 HPS5Q9UPZ3 1129 aa7.95□□□□□ -1.14
SMARCAD1-208ENST00000514232 STK25O00506 426 aa7.94□□□□□ -1.14
SMARCAD1-208ENST00000514232 WIPF1O43516 503 aa7.93□□□□□ -1.14
SMARCAD1-208ENST00000514232 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.93□□□□□ -1.14
SMARCAD1-208ENST00000514232 KIAA1468Q9P260 1216 aa7.93□□□□□ -1.14
SMARCAD1-208ENST00000514232 TAOK2Q9UL54 1235 aa7.93□□□□□ -1.14
SMARCAD1-208ENST00000514232 DGAT1O75907 488 aa7.91□□□□□ -1.14
SMARCAD1-208ENST00000514232 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.91□□□□□ -1.14
SMARCAD1-208ENST00000514232 SEPT9Q9UHD8 586 aaPredicted RBP7.91□□□□□ -1.14
SMARCAD1-208ENST00000514232 ONECUT3O60422 494 aaPredicted RBP7.9□□□□□ -1.14
SMARCAD1-208ENST00000514232 PKDCCQ504Y2 493 aa7.89□□□□□ -1.15
SMARCAD1-208ENST00000514232 WFS1O76024 890 aa7.88□□□□□ -1.15
SMARCAD1-208ENST00000514232 FAM98CQ17RN3 349 aaKnown RBP7.88□□□□□ -1.15
SMARCAD1-208ENST00000514232 LRCH3Q96II8 777 aa7.88□□□□□ -1.15
SMARCAD1-208ENST00000514232 MTRQ99707 1265 aa7.88□□□□□ -1.15
SMARCAD1-208ENST00000514232 IL21Q9HBE4 155 aa7.87□□□□□ -1.15
SMARCAD1-208ENST00000514232 EVI5O60447 810 aa7.86□□□□□ -1.15
SMARCAD1-208ENST00000514232 INSM1Q01101 510 aaPredicted RBP7.86□□□□□ -1.15
SMARCAD1-208ENST00000514232 NFX1Q12986 1120 aaKnown RBP7.85□□□□□ -1.15
SMARCAD1-208ENST00000514232 ZNF516Q92618 1163 aa7.85□□□□□ -1.15
SMARCAD1-208ENST00000514232 PCDHGA10Q9Y5H3 936 aa7.85□□□□□ -1.15
SMARCAD1-208ENST00000514232 SUZ12Q15022 739 aaKnown RBP7.84□□□□□ -1.15
SMARCAD1-208ENST00000514232 PRR20EP86478 221 aa7.82□□□□□ -1.16
SMARCAD1-208ENST00000514232 PRR20CP86479 221 aa7.82□□□□□ -1.16
SMARCAD1-208ENST00000514232 PRR20DP86480 221 aa7.82□□□□□ -1.16
SMARCAD1-208ENST00000514232 PRR20BP86481 221 aa7.82□□□□□ -1.16
SMARCAD1-208ENST00000514232 PRR20AP86496 221 aa7.82□□□□□ -1.16
SMARCAD1-208ENST00000514232 LCE2CQ5TA81 110 aa7.82□□□□□ -1.16
SMARCAD1-208ENST00000514232 EMID1Q96A84 441 aaPredicted RBP7.82□□□□□ -1.16
SMARCAD1-208ENST00000514232 ST8SIA5O15466 376 aa7.8□□□□□ -1.16
SMARCAD1-208ENST00000514232 PPP4CP60510 307 aa7.8□□□□□ -1.16
SMARCAD1-208ENST00000514232 NKX2-3Q8TAU0 364 aa7.8□□□□□ -1.16
SMARCAD1-208ENST00000514232 AAASQ9NRG9 546 aa7.8□□□□□ -1.16
SMARCAD1-208ENST00000514232 TRIM6-TRIM34B2RNG4 842 aa7.79□□□□□ -1.16
SMARCAD1-208ENST00000514232 PPP1R15BQ5SWA1 713 aa7.78□□□□□ -1.16
SMARCAD1-208ENST00000514232 CRISPLD2Q9H0B8 497 aa7.78□□□□□ -1.16
SMARCAD1-208ENST00000514232 TMUB1Q9BVT8 246 aa7.77□□□□□ -1.17
SMARCAD1-208ENST00000514232 FBXW7Q969H0 707 aa7.76□□□□□ -1.17
SMARCAD1-208ENST00000514232 FAM187AA6NFU0 413 aa7.74□□□□□ -1.17
SMARCAD1-208ENST00000514232 SLC19A1P41440 591 aa7.74□□□□□ -1.17
SMARCAD1-208ENST00000514232 TYW1BQ6NUM6 668 aa7.74□□□□□ -1.17
SMARCAD1-208ENST00000514232 GGCXP38435 758 aa7.73□□□□□ -1.17
SMARCAD1-208ENST00000514232 SPRYD7Q5W111 196 aa7.73□□□□□ -1.17
SMARCAD1-208ENST00000514232 GDF9O60383 454 aa7.72□□□□□ -1.17
SMARCAD1-208ENST00000514232 C6orf132Q5T0Z8 1188 aa7.72□□□□□ -1.17
SMARCAD1-208ENST00000514232 ZNF598Q86UK7 904 aaKnown RBP7.72□□□□□ -1.17
SMARCAD1-208ENST00000514232 PHF14O94880 888 aa7.71□□□□□ -1.18
SMARCAD1-208ENST00000514232 DACH1Q9UI36 760 aa7.71□□□□□ -1.18
SMARCAD1-208ENST00000514232 CRIPAKQ8N1N5 446 aa7.7□□□□□ -1.18
SMARCAD1-208ENST00000514232 APLP1P51693 650 aa7.69□□□□□ -1.18
SMARCAD1-208ENST00000514232 SAMD7Q7Z3H4 446 aa7.69□□□□□ -1.18
SMARCAD1-208ENST00000514232 GMPR2Q9P2T1 348 aaKnown RBP7.68□□□□□ -1.18
SMARCAD1-208ENST00000514232 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
SMARCAD1-208ENST00000514232 TSKSQ9UJT2 592 aa7.67□□□□□ -1.18
SMARCAD1-208ENST00000514232 RNF223E7ERA6 249 aa7.66□□□□□ -1.18
SMARCAD1-208ENST00000514232 TNFRSF10AO00220 468 aa7.66□□□□□ -1.18
SMARCAD1-208ENST00000514232 NCKAP5LQ9HCH0 1330 aa7.66□□□□□ -1.18
SMARCAD1-208ENST00000514232 C11orf95C9JLR9 678 aaPredicted RBP7.64□□□□□ -1.19
SMARCAD1-208ENST00000514232 MAP3K9P80192 1104 aa7.64□□□□□ -1.19
SMARCAD1-208ENST00000514232 ZNF697Q5TEC3 545 aa7.64□□□□□ -1.19
SMARCAD1-208ENST00000514232 LIAT1Q6ZQX7 453 aa7.63□□□□□ -1.19
SMARCAD1-208ENST00000514232 EMILIN3Q9NT22 766 aa7.62□□□□□ -1.19
SMARCAD1-208ENST00000514232 FAM181BA6NEQ2 426 aa7.61□□□□□ -1.19
SMARCAD1-208ENST00000514232 TERTO14746 1132 aaKnown RBP7.61□□□□□ -1.19
SMARCAD1-208ENST00000514232 AVPP01185 164 aa7.61□□□□□ -1.19
SMARCAD1-208ENST00000514232 PACS2Q86VP3 889 aa7.61□□□□□ -1.19
SMARCAD1-208ENST00000514232 RGL2O15211 777 aa7.6□□□□□ -1.19
SMARCAD1-208ENST00000514232 COPS2P61201 443 aa7.6□□□□□ -1.19
SMARCAD1-208ENST00000514232 EPAS1Q99814 870 aa7.6□□□□□ -1.19
SMARCAD1-208ENST00000514232 SMAPO00193 183 aa7.59□□□□□ -1.19
SMARCAD1-208ENST00000514232 ZPR1O75312 459 aa7.59□□□□□ -1.19
SMARCAD1-208ENST00000514232 C3orf80F5H4A9 247 aa7.58□□□□□ -1.2
SMARCAD1-208ENST00000514232 ANKLE1Q8NAG6 615 aa7.58□□□□□ -1.2
SMARCAD1-208ENST00000514232 ECM2O94769 699 aaPredicted RBP7.56□□□□□ -1.2
SMARCAD1-208ENST00000514232 PDE4AP27815 886 aa7.56□□□□□ -1.2
SMARCAD1-208ENST00000514232 PKD2L1Q9P0L9 805 aa7.56□□□□□ -1.2
SMARCAD1-208ENST00000514232 FAM198AQ9UFP1 575 aa7.56□□□□□ -1.2
SMARCAD1-208ENST00000514232 SMCPP49901 116 aaPredicted RBP7.54□□□□□ -1.2
SMARCAD1-208ENST00000514232 ZSCAN1Q8NBB4 408 aa7.54□□□□□ -1.2
SMARCAD1-208ENST00000514232 AXIN1O15169 862 aa7.53□□□□□ -1.2
SMARCAD1-208ENST00000514232 CTC1Q2NKJ3 1217 aa7.53□□□□□ -1.2
SMARCAD1-208ENST00000514232 PPEF1O14829 653 aaPredicted RBP7.52□□□□□ -1.21
SMARCAD1-208ENST00000514232 SNRPBP14678 240 aaKnown RBP7.52□□□□□ -1.21
SMARCAD1-208ENST00000514232 MFSD10Q14728 455 aa7.52□□□□□ -1.21
SMARCAD1-208ENST00000514232 RBM33Q96EV2 1170 aaKnown RBP7.52□□□□□ -1.21
SMARCAD1-208ENST00000514232 LMOD2Q6P5Q4 547 aa7.51□□□□□ -1.21
SMARCAD1-208ENST00000514232 TOR4AQ9NXH8 423 aa7.51□□□□□ -1.21
SMARCAD1-208ENST00000514232 DDX27Q96GQ7 796 aaKnown RBP7.5□□□□□ -1.21
SMARCAD1-208ENST00000514232 TSR1Q2NL82 804 aaKnown RBP7.49□□□□□ -1.21
SMARCAD1-208ENST00000514232 PLA2G2CQ5R387 149 aa7.49□□□□□ -1.21
SMARCAD1-208ENST00000514232 TATDN2Q93075 761 aa7.49□□□□□ -1.21
SMARCAD1-208ENST00000514232 CDCA7LQ96GN5 454 aa7.49□□□□□ -1.21
SMARCAD1-208ENST00000514232 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms