RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 GRXCR2A6NFK2 248 aa13.77□□□□□ -0.21
PDE4D-221ENST00000514231 MMRN1Q13201 1228 aa13.77□□□□□ -0.21
PDE4D-221ENST00000514231 NBR1Q14596 966 aa13.77□□□□□ -0.21
PDE4D-221ENST00000514231 ADGRD1Q6QNK2 874 aa13.77□□□□□ -0.21
PDE4D-221ENST00000514231 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.21
PDE4D-221ENST00000514231 C6orf132Q5T0Z8 1188 aa13.76□□□□□ -0.21
PDE4D-221ENST00000514231 EN1Q05925 392 aaPredicted RBP13.74□□□□□ -0.21
PDE4D-221ENST00000514231 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
PDE4D-221ENST00000514231 PPP1R3GB7ZBB8 358 aa13.72□□□□□ -0.21
PDE4D-221ENST00000514231 OSBPP22059 807 aa13.72□□□□□ -0.21
PDE4D-221ENST00000514231 ZBED2Q9BTP6 218 aa13.72□□□□□ -0.21
PDE4D-221ENST00000514231 VPS9D1Q9Y2B5 631 aa13.72□□□□□ -0.21
PDE4D-221ENST00000514231 HRO43593 1189 aa13.7□□□□□ -0.22
PDE4D-221ENST00000514231 MAP3K7O43318 606 aa13.69□□□□□ -0.22
PDE4D-221ENST00000514231 COL9A1P20849 921 aa13.69□□□□□ -0.22
PDE4D-221ENST00000514231 MLLT3P42568 568 aaPredicted RBP13.68□□□□□ -0.22
PDE4D-221ENST00000514231 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
PDE4D-221ENST00000514231 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
PDE4D-221ENST00000514231 SEMA3EO15041 775 aa13.66□□□□□ -0.22
PDE4D-221ENST00000514231 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
PDE4D-221ENST00000514231 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
PDE4D-221ENST00000514231 ONECUT3O60422 494 aaPredicted RBP13.63□□□□□ -0.23
PDE4D-221ENST00000514231 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
PDE4D-221ENST00000514231 CERKQ8TCT0 537 aa13.62□□□□□ -0.23
PDE4D-221ENST00000514231 RNF166Q96A37 237 aaPredicted RBP13.61□□□□□ -0.23
PDE4D-221ENST00000514231 TESPA1A2RU30 521 aaPredicted RBP13.6□□□□□ -0.23
PDE4D-221ENST00000514231 PROX2Q3B8N5 592 aa13.6□□□□□ -0.23
PDE4D-221ENST00000514231 RABGEF1Q9UJ41 708 aa13.6□□□□□ -0.23
PDE4D-221ENST00000514231 SMYD5Q6GMV2 418 aa13.57□□□□□ -0.24
PDE4D-221ENST00000514231 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
PDE4D-221ENST00000514231 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
PDE4D-221ENST00000514231 KIAA1468Q9P260 1216 aa13.55□□□□□ -0.24
PDE4D-221ENST00000514231 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
PDE4D-221ENST00000514231 CDHR5Q9HBB8 845 aa13.54□□□□□ -0.24
PDE4D-221ENST00000514231 NPDC1Q9NQX5 325 aaPredicted RBP13.54□□□□□ -0.24
PDE4D-221ENST00000514231 PRSS12P56730 875 aa13.53□□□□□ -0.24
PDE4D-221ENST00000514231 CDCA7LQ96GN5 454 aa13.53□□□□□ -0.24
PDE4D-221ENST00000514231 PACS2Q86VP3 889 aa13.51□□□□□ -0.25
PDE4D-221ENST00000514231 TSKSQ9UJT2 592 aa13.51□□□□□ -0.25
PDE4D-221ENST00000514231 LAPTM4BQ86VI4 370 aa13.5□□□□□ -0.25
PDE4D-221ENST00000514231 RBM27Q9P2N5 1060 aaKnown RBP13.5□□□□□ -0.25
PDE4D-221ENST00000514231 GOLGA8CPA6NN73 597 aa13.48□□□□□ -0.25
PDE4D-221ENST00000514231 NUTM2FA1L443 756 aa13.46□□□□□ -0.25
PDE4D-221ENST00000514231 PTGDRQ13258 359 aa13.46□□□□□ -0.25
PDE4D-221ENST00000514231 TTC13Q8NBP0 860 aa13.45□□□□□ -0.26
PDE4D-221ENST00000514231 KCTD12Q96CX2 325 aaKnown RBP13.45□□□□□ -0.26
PDE4D-221ENST00000514231 FAM198AQ9UFP1 575 aa13.45□□□□□ -0.26
PDE4D-221ENST00000514231 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
PDE4D-221ENST00000514231 WNT2BQ93097 391 aa13.42□□□□□ -0.26
PDE4D-221ENST00000514231 HCSTQ9UBK5 93 aa13.42□□□□□ -0.26
PDE4D-221ENST00000514231 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
PDE4D-221ENST00000514231 SEPT9Q9UHD8 586 aaPredicted RBP13.41□□□□□ -0.26
PDE4D-221ENST00000514231 FCHSD2O94868 740 aa13.4□□□□□ -0.26
PDE4D-221ENST00000514231 PADI6Q6TGC4 694 aa13.4□□□□□ -0.26
PDE4D-221ENST00000514231 TATDN2Q93075 761 aa13.4□□□□□ -0.26
PDE4D-221ENST00000514231 ZFRQ96KR1 1074 aaKnown RBP13.4□□□□□ -0.26
PDE4D-221ENST00000514231 TULP1O00294 542 aaPredicted RBP13.39□□□□□ -0.27
PDE4D-221ENST00000514231 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
PDE4D-221ENST00000514231 THSD4Q6ZMP0 1018 aa13.37□□□□□ -0.27
PDE4D-221ENST00000514231 ANKK1Q8NFD2 765 aa13.37□□□□□ -0.27
PDE4D-221ENST00000514231 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
PDE4D-221ENST00000514231 C3orf80F5H4A9 247 aa13.36□□□□□ -0.27
PDE4D-221ENST00000514231 NUDT18Q6ZVK8 323 aa13.36□□□□□ -0.27
PDE4D-221ENST00000514231 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
PDE4D-221ENST00000514231 HIC1Q14526 733 aa13.35□□□□□ -0.27
PDE4D-221ENST00000514231 SMAPO00193 183 aa13.34□□□□□ -0.27
PDE4D-221ENST00000514231 SOWAHBA6NEL2 793 aa13.33□□□□□ -0.28
PDE4D-221ENST00000514231 PTPN5P54829 565 aa13.32□□□□□ -0.28
PDE4D-221ENST00000514231 EYA1Q99502 592 aa13.31□□□□□ -0.28
PDE4D-221ENST00000514231 GPIHBP1Q8IV16 184 aa13.3□□□□□ -0.28
PDE4D-221ENST00000514231 GNPATO15228 680 aa13.29□□□□□ -0.28
PDE4D-221ENST00000514231 GPR37O15354 613 aa13.29□□□□□ -0.28
PDE4D-221ENST00000514231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.29□□□□□ -0.28
PDE4D-221ENST00000514231 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
PDE4D-221ENST00000514231 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
PDE4D-221ENST00000514231 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.28□□□□□ -0.28
PDE4D-221ENST00000514231 BCAMP50895 628 aa13.27□□□□□ -0.29
PDE4D-221ENST00000514231 ADGRG1Q9Y653 693 aa13.27□□□□□ -0.29
PDE4D-221ENST00000514231 RBM46Q8TBY0 533 aaKnown RBP13.26□□□□□ -0.29
PDE4D-221ENST00000514231 SAMD7Q7Z3H4 446 aa13.24□□□□□ -0.29
PDE4D-221ENST00000514231 OATP04181 439 aa13.23□□□□□ -0.29
PDE4D-221ENST00000514231 FECHP22830 423 aa13.23□□□□□ -0.29
PDE4D-221ENST00000514231 TSR3Q9UJK0 312 aaKnown RBP13.23□□□□□ -0.29
PDE4D-221ENST00000514231 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
PDE4D-221ENST00000514231 FAM161AQ3B820 660 aa13.21□□□□□ -0.29
PDE4D-221ENST00000514231 WBP1LQ9NX94 342 aa13.2□□□□□ -0.3
PDE4D-221ENST00000514231 DNAJB2P25686 324 aa13.19□□□□□ -0.3
PDE4D-221ENST00000514231 PPP4CP60510 307 aa13.19□□□□□ -0.3
PDE4D-221ENST00000514231 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
PDE4D-221ENST00000514231 LMOD2Q6P5Q4 547 aa13.18□□□□□ -0.3
PDE4D-221ENST00000514231 PXYLP1Q8TE99 480 aa13.18□□□□□ -0.3
PDE4D-221ENST00000514231 SWT1Q5T5J6 900 aaKnown RBP13.17□□□□□ -0.3
PDE4D-221ENST00000514231 RCCD1A6NED2 376 aa13.16□□□□□ -0.3
PDE4D-221ENST00000514231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
PDE4D-221ENST00000514231 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
PDE4D-221ENST00000514231 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
PDE4D-221ENST00000514231 TMEM134Q9H6X4 195 aa13.15□□□□□ -0.3
PDE4D-221ENST00000514231 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
PDE4D-221ENST00000514231 PLA2G2EQ9NZK7 142 aa13.14□□□□□ -0.31
PDE4D-221ENST00000514231 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms