RNA–Protein interactions for RNA: ENST00000513654.5

EXOSC9-212, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 3,882 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-212ENST00000513654 RGL3Q3MIN7 710 aa8.53□□□□□ -1.04
EXOSC9-212ENST00000513654 L1TD1Q5T7N2 865 aaKnown RBP8.53□□□□□ -1.04
EXOSC9-212ENST00000513654 CDK13Q14004 1512 aaKnown RBP8.53□□□□□ -1.04
EXOSC9-212ENST00000513654 KDM2BQ8NHM5 1336 aa8.53□□□□□ -1.04
EXOSC9-212ENST00000513654 NPM3O75607 178 aaKnown RBP8.53□□□□□ -1.04
EXOSC9-212ENST00000513654 KIAA1107Q9UPP5 1409 aa8.52□□□□□ -1.05
EXOSC9-212ENST00000513654 PKNOX2Q96KN3 472 aa8.52□□□□□ -1.05
EXOSC9-212ENST00000513654 RRAGDQ9NQL2 400 aaPredicted RBP8.52□□□□□ -1.05
EXOSC9-212ENST00000513654 ARHGEF11O15085 1522 aa8.52□□□□□ -1.05
EXOSC9-212ENST00000513654 ADAMTS8Q9UP79 889 aa8.52□□□□□ -1.05
EXOSC9-212ENST00000513654 EPRSP07814 1512 aaKnown RBP8.52□□□□□ -1.05
EXOSC9-212ENST00000513654 LRRIQ1Q96JM4 1722 aa8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 CUL7Q14999 1698 aa8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 VSIG10Q8N0Z9 540 aa8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 PANK3Q9H999 370 aa8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 TOPBP1Q92547 1522 aa8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 NUP155O75694 1391 aa8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 CC2D2AQ9P2K1 1620 aa8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 GZF1Q9H116 711 aaPredicted RBP8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 THOC2Q8NI27 1593 aaKnown RBP8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 SPRYD3Q8NCJ5 442 aa8.51□□□□□ -1.05
EXOSC9-212ENST00000513654 POLR1AO95602 1720 aaPredicted RBP8.5□□□□□ -1.05
EXOSC9-212ENST00000513654 GOLGA2Q08379 1002 aa8.5□□□□□ -1.05
EXOSC9-212ENST00000513654 PNNQ9H307 717 aaKnown RBP8.5□□□□□ -1.05
EXOSC9-212ENST00000513654 PZPP20742 1482 aa8.5□□□□□ -1.05
EXOSC9-212ENST00000513654 PARD3Q8TEW0 1356 aa8.49□□□□□ -1.05
EXOSC9-212ENST00000513654 CANXP27824 592 aaKnown RBP8.49□□□□□ -1.05
EXOSC9-212ENST00000513654 SAMD9Q5K651 1589 aa8.49□□□□□ -1.05
EXOSC9-212ENST00000513654 DNMBPQ6XZF7 1577 aa8.49□□□□□ -1.05
EXOSC9-212ENST00000513654 UPF2Q9HAU5 1272 aaKnown RBP8.49□□□□□ -1.05
EXOSC9-212ENST00000513654 GAPVD1Q14C86 1478 aa8.48□□□□□ -1.05
EXOSC9-212ENST00000513654 KDM5CP41229 1560 aa8.48□□□□□ -1.05
EXOSC9-212ENST00000513654 GOLGA6L3A6NEY3 463 aa8.48□□□□□ -1.05
EXOSC9-212ENST00000513654 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
EXOSC9-212ENST00000513654 DUSP27Q5VZP5 1158 aa8.48□□□□□ -1.05
EXOSC9-212ENST00000513654 HSP90AA1P07900 732 aaKnown RBP8.48□□□□□ -1.05
EXOSC9-212ENST00000513654 HSP90AA2PQ14568 343 aaPredicted RBP8.48□□□□□ -1.05
EXOSC9-212ENST00000513654 NBPF1Q3BBV0 1214 aa8.48□□□□□ -1.05
EXOSC9-212ENST00000513654 MBD5Q9P267 1494 aa8.47□□□□□ -1.05
EXOSC9-212ENST00000513654 PRDM2Q13029 1718 aa8.47□□□□□ -1.05
EXOSC9-212ENST00000513654 RALGAPBQ86X10 1494 aa8.47□□□□□ -1.05
EXOSC9-212ENST00000513654 ANKRD30AQ9BXX3 1397 aa8.47□□□□□ -1.05
EXOSC9-212ENST00000513654 SEC24BO95487 1268 aa8.47□□□□□ -1.05
EXOSC9-212ENST00000513654 CCDC146Q8IYE0 955 aa8.47□□□□□ -1.05
EXOSC9-212ENST00000513654 BCAR3O75815 825 aa8.46□□□□□ -1.05
EXOSC9-212ENST00000513654 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.05
EXOSC9-212ENST00000513654 TSPY4P0CV99 314 aa8.46□□□□□ -1.06
EXOSC9-212ENST00000513654 TSPY10P0CW01 314 aa8.46□□□□□ -1.06
EXOSC9-212ENST00000513654 IGHDP01880 384 aa8.46□□□□□ -1.06
EXOSC9-212ENST00000513654 NESP48681 1621 aa8.45□□□□□ -1.06
EXOSC9-212ENST00000513654 TMF1P82094 1093 aa8.45□□□□□ -1.06
EXOSC9-212ENST00000513654 KIF14Q15058 1648 aa8.45□□□□□ -1.06
EXOSC9-212ENST00000513654 XRCC6P12956 609 aaKnown RBP eCLIP8.45□□□□□ -1.06
EXOSC9-212ENST00000513654 UHRF1BP1Q6BDS2 1440 aa8.45□□□□□ -1.06
EXOSC9-212ENST00000513654 ANKRD50Q9ULJ7 1429 aa8.45□□□□□ -1.06
EXOSC9-212ENST00000513654 ZMYND15Q9H091 742 aa8.45□□□□□ -1.06
EXOSC9-212ENST00000513654 PANK2Q9BZ23 570 aa8.44□□□□□ -1.06
EXOSC9-212ENST00000513654 PLEKHH1Q9ULM0 1364 aa8.44□□□□□ -1.06
EXOSC9-212ENST00000513654 COG6Q9Y2V7 657 aa8.44□□□□□ -1.06
EXOSC9-212ENST00000513654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.065e-7■■■□□ 14.7
EXOSC9-212ENST00000513654 BLMP54132 1417 aaPredicted RBP8.43□□□□□ -1.06
EXOSC9-212ENST00000513654 APAF1O14727 1248 aa8.43□□□□□ -1.06
EXOSC9-212ENST00000513654 SLFN5Q08AF3 891 aa8.43□□□□□ -1.06
EXOSC9-212ENST00000513654 USP19O94966 1318 aa8.43□□□□□ -1.06
EXOSC9-212ENST00000513654 DNMT1P26358 1616 aaKnown RBP8.43□□□□□ -1.06
EXOSC9-212ENST00000513654 MAPK8IP3Q9UPT6 1336 aa8.43□□□□□ -1.06
EXOSC9-212ENST00000513654 PPP2R1AP30153 589 aa8.42□□□□□ -1.06
EXOSC9-212ENST00000513654 PANK1Q8TE04 598 aa8.42□□□□□ -1.06
EXOSC9-212ENST00000513654 PLEKHH2Q8IVE3 1493 aa8.42□□□□□ -1.06
EXOSC9-212ENST00000513654 DISP3Q9P2K9 1392 aa8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 TRIM44Q96DX7 344 aaPredicted RBP8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 MYH16Q9H6N6 1097 aa8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 PRG4Q92954 1404 aaPredicted RBP8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 MCM4P33991 863 aa8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 CLCN1P35523 988 aa8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 CLUAP1Q96AJ1 413 aa8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 ZMYM4Q5VZL5 1548 aa8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 SPINK5Q9NQ38 1064 aaPredicted RBP8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 CGNL1Q0VF96 1302 aa8.41□□□□□ -1.06
EXOSC9-212ENST00000513654 NEUROD2Q15784 382 aa8.4□□□□□ -1.06
EXOSC9-212ENST00000513654 CAMSAP2Q08AD1 1489 aa8.4□□□□□ -1.06
EXOSC9-212ENST00000513654 RRP9O43818 475 aaKnown RBP8.4□□□□□ -1.06
EXOSC9-212ENST00000513654 TRAK2O60296 914 aa8.4□□□□□ -1.06
EXOSC9-212ENST00000513654 KIAA0586Q9BVV6 1533 aa8.4□□□□□ -1.06
EXOSC9-212ENST00000513654 TESK2Q96S53 571 aa8.4□□□□□ -1.07
EXOSC9-212ENST00000513654 E9PSI1 815 aa8.39□□□□□ -1.07
EXOSC9-212ENST00000513654 HNRNPMP52272 730 aaKnown RBP eCLIP8.39□□□□□ -1.07
EXOSC9-212ENST00000513654 ANTXR1Q9H6X2 564 aa8.39□□□□□ -1.07
EXOSC9-212ENST00000513654 CENPJQ9HC77 1338 aaPredicted RBP8.39□□□□□ -1.07
EXOSC9-212ENST00000513654 WDR62O43379 1518 aa8.38□□□□□ -1.07
EXOSC9-212ENST00000513654 INSRP06213 1382 aa8.38□□□□□ -1.07
EXOSC9-212ENST00000513654 EIF3AQ14152 1382 aaKnown RBP8.38□□□□□ -1.07
EXOSC9-212ENST00000513654 MRE11P49959 708 aa8.38□□□□□ -1.07
EXOSC9-212ENST00000513654 MFAP1P55081 439 aaKnown RBP8.38□□□□□ -1.07
EXOSC9-212ENST00000513654 URB2Q14146 1524 aaKnown RBP8.38□□□□□ -1.07
EXOSC9-212ENST00000513654 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
EXOSC9-212ENST00000513654 CHMP5Q9NZZ3 219 aa8.38□□□□□ -1.07
EXOSC9-212ENST00000513654 LAMC3Q9Y6N6 1575 aa8.38□□□□□ -1.07
EXOSC9-212ENST00000513654 ERBINQ96RT1 1412 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms