RNA–Protein interactions for RNA: ENST00000512701.6

TTC39B-208, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TTC39B, Length 10,483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-208ENST00000512701 NUTM2FA1L443 756 aa9.54□□□□□ -0.88
TTC39B-208ENST00000512701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.54□□□□□ -0.88
TTC39B-208ENST00000512701 PRM3Q9NNZ6 103 aa9.54□□□□□ -0.88
TTC39B-208ENST00000512701 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
TTC39B-208ENST00000512701 TAF7LQ5H9L4 462 aa9.54□□□□□ -0.88
TTC39B-208ENST00000512701 DDX11L8A8MPP1 907 aa9.54□□□□□ -0.88
TTC39B-208ENST00000512701 ABCC8Q09428 1581 aa9.54□□□□□ -0.88
TTC39B-208ENST00000512701 PMFBP1Q8TBY8 1022 aa9.54□□□□□ -0.88
TTC39B-208ENST00000512701 CHMP4BQ9H444 224 aaKnown RBP9.54□□□□□ -0.88
TTC39B-208ENST00000512701 LTV1Q96GA3 475 aaPredicted RBP9.54□□□□□ -0.88
TTC39B-208ENST00000512701 CEP164Q9UPV0 1460 aa9.54□□□□□ -0.88
TTC39B-208ENST00000512701 NECTIN2Q92692 538 aa9.54□□□□□ -0.88
TTC39B-208ENST00000512701 IPO8O15397 1037 aaKnown RBP9.53□□□□□ -0.88
TTC39B-208ENST00000512701 NFKBIBQ15653 356 aa9.53□□□□□ -0.88
TTC39B-208ENST00000512701 RNF214Q8ND24 703 aa9.53□□□□□ -0.88
TTC39B-208ENST00000512701 MCTP1Q6DN14 999 aa9.53□□□□□ -0.88
TTC39B-208ENST00000512701 L3MBTL2Q969R5 705 aa9.53□□□□□ -0.88
TTC39B-208ENST00000512701 SKIDA1Q1XH10 827 aa9.52□□□□□ -0.89
TTC39B-208ENST00000512701 FANCIQ9NVI1 1328 aa9.52□□□□□ -0.89
TTC39B-208ENST00000512701 EEA1Q15075 1411 aa9.52□□□□□ -0.89
TTC39B-208ENST00000512701 MPHOSPH9Q99550 1183 aa9.52□□□□□ -0.89
TTC39B-208ENST00000512701 FRAT2O75474 233 aaPredicted RBP9.51□□□□□ -0.89
TTC39B-208ENST00000512701 TPM4P67936 248 aa9.51□□□□□ -0.89
TTC39B-208ENST00000512701 ZNF428Q96B54 188 aa9.5□□□□□ -0.89
TTC39B-208ENST00000512701 RALBP1Q15311 655 aa9.5□□□□□ -0.89
TTC39B-208ENST00000512701 GORABQ5T7V8 394 aa9.5□□□□□ -0.89
TTC39B-208ENST00000512701 FAM43AQ8N2R8 423 aa9.5□□□□□ -0.89
TTC39B-208ENST00000512701 KIF16BQ96L93 1317 aa9.5□□□□□ -0.89
TTC39B-208ENST00000512701 H3BQV1 296 aa9.49□□□□□ -0.89
TTC39B-208ENST00000512701 IFFO2Q5TF58 517 aa9.49□□□□□ -0.89
TTC39B-208ENST00000512701 VPS53Q5VIR6 699 aa9.49□□□□□ -0.89
TTC39B-208ENST00000512701 ST18O60284 1047 aa9.49□□□□□ -0.89
TTC39B-208ENST00000512701 SF3A1Q15459 793 aaKnown RBP9.49□□□□□ -0.89
TTC39B-208ENST00000512701 TRHP20396 242 aaPredicted RBP9.49□□□□□ -0.89
TTC39B-208ENST00000512701 GGT6Q6P531 493 aa9.49□□□□□ -0.89
TTC39B-208ENST00000512701 PRDM10Q9NQV6 1147 aa9.48□□□□□ -0.89
TTC39B-208ENST00000512701 PANK3Q9H999 370 aa9.48□□□□□ -0.89
TTC39B-208ENST00000512701 ARHGAP35Q9NRY4 1499 aa9.48□□□□□ -0.89
TTC39B-208ENST00000512701 SKAP1Q86WV1 359 aa9.48□□□□□ -0.89
TTC39B-208ENST00000512701 PANK1Q8TE04 598 aa9.48□□□□□ -0.89
TTC39B-208ENST00000512701 TPM3P06753 285 aa9.47□□□□□ -0.89
TTC39B-208ENST00000512701 TTLL5Q6EMB2 1281 aa9.47□□□□□ -0.89
TTC39B-208ENST00000512701 CENPQQ7L2Z9 268 aaPredicted RBP9.47□□□□□ -0.89
TTC39B-208ENST00000512701 IFT57Q9NWB7 429 aa9.47□□□□□ -0.89
TTC39B-208ENST00000512701 NGEFQ8N5V2 710 aa9.47□□□□□ -0.89
TTC39B-208ENST00000512701 PHF14O94880 888 aa9.46□□□□□ -0.89
TTC39B-208ENST00000512701 SETQ01105 290 aaPredicted RBP9.46□□□□□ -0.89
TTC39B-208ENST00000512701 KIF27Q86VH2 1401 aa9.46□□□□□ -0.89
TTC39B-208ENST00000512701 ANO2Q9NQ90 1003 aa9.46□□□□□ -0.9
TTC39B-208ENST00000512701 BECN2A8MW95 431 aa9.46□□□□□ -0.9
TTC39B-208ENST00000512701 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
TTC39B-208ENST00000512701 VPS37CA5D8V6 355 aaPredicted RBP9.46□□□□□ -0.9
TTC39B-208ENST00000512701 TPD52L1Q16890 204 aaPredicted RBP9.46□□□□□ -0.9
TTC39B-208ENST00000512701 CCDC27Q2M243 656 aa9.46□□□□□ -0.9
TTC39B-208ENST00000512701 STK31Q9BXU1 1019 aa9.46□□□□□ -0.9
TTC39B-208ENST00000512701 HOMER1Q86YM7 354 aa9.46□□□□□ -0.9
TTC39B-208ENST00000512701 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
TTC39B-208ENST00000512701 GOLGA6L19H0YKK7 550 aa9.45□□□□□ -0.9
TTC39B-208ENST00000512701 HTATSF1O43719 755 aaKnown RBP9.45□□□□□ -0.9
TTC39B-208ENST00000512701 NUP155O75694 1391 aa9.45□□□□□ -0.9
TTC39B-208ENST00000512701 ST20-MTHFSA0A0A6YYL1 179 aa9.45□□□□□ -0.9
TTC39B-208ENST00000512701 HDGFL2Q7Z4V5 671 aaPredicted RBP9.45□□□□□ -0.9
TTC39B-208ENST00000512701 RB1CC1Q8TDY2 1594 aa9.44□□□□□ -0.9
TTC39B-208ENST00000512701 APAF1O14727 1248 aa9.44□□□□□ -0.9
TTC39B-208ENST00000512701 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.43□□□□□ -0.9
TTC39B-208ENST00000512701 LNPKQ9C0E8 428 aa9.43□□□□□ -0.9
TTC39B-208ENST00000512701 SPC24Q8NBT2 197 aa9.43□□□□□ -0.9
TTC39B-208ENST00000512701 GPATCH3Q96I76 525 aa9.43□□□□□ -0.9
TTC39B-208ENST00000512701 CAVIN1Q6NZI2 390 aaKnown RBP9.43□□□□□ -0.9
TTC39B-208ENST00000512701 BICD2Q8TD16 824 aa9.43□□□□□ -0.9
TTC39B-208ENST00000512701 PCMTD1Q96MG8 357 aaPredicted RBP9.43□□□□□ -0.9
TTC39B-208ENST00000512701 DHX57Q6P158 1386 aaKnown RBP9.43□□□□□ -0.9
TTC39B-208ENST00000512701 NASPP49321 788 aaPredicted RBP9.43□□□□□ -0.9
TTC39B-208ENST00000512701 NLRP13Q86W25 1043 aa9.43□□□□□ -0.9
TTC39B-208ENST00000512701 PRKRIP1Q9H875 184 aaPredicted RBP9.43□□□□□ -0.9
TTC39B-208ENST00000512701 VPS8Q8N3P4 1428 aa9.43□□□□□ -0.9
TTC39B-208ENST00000512701 TRAK1Q9UPV9 953 aa9.43□□□□□ -0.9
TTC39B-208ENST00000512701 MYBBP1AQ9BQG0 1328 aaKnown RBP9.42□□□□□ -0.9
TTC39B-208ENST00000512701 FAM184AQ8NB25 1140 aa9.42□□□□□ -0.9
TTC39B-208ENST00000512701 CCDC88BA6NC98 1476 aa9.42□□□□□ -0.9
TTC39B-208ENST00000512701 RAD21O60216 631 aa9.42□□□□□ -0.9
TTC39B-208ENST00000512701 CSPP1Q1MSJ5 1256 aa9.42□□□□□ -0.9
TTC39B-208ENST00000512701 STK11IPQ8N1F8 1099 aa9.42□□□□□ -0.9
TTC39B-208ENST00000512701 MSH5O43196 834 aa9.41□□□□□ -0.9
TTC39B-208ENST00000512701 CDCA7LQ96GN5 454 aa9.41□□□□□ -0.9
TTC39B-208ENST00000512701 HMMRO75330 724 aa9.41□□□□□ -0.9
TTC39B-208ENST00000512701 ZBED9Q6R2W3 1325 aa9.41□□□□□ -0.9
TTC39B-208ENST00000512701 EIF2S2P20042 333 aaKnown RBP9.41□□□□□ -0.9
TTC39B-208ENST00000512701 ERICH4A6NGS2 130 aa9.41□□□□□ -0.9
TTC39B-208ENST00000512701 C1orf115Q9H7X2 142 aa9.41□□□□□ -0.9
TTC39B-208ENST00000512701 PDILTQ8N807 584 aa9.4□□□□□ -0.9
TTC39B-208ENST00000512701 C22orf23Q9BZE7 217 aa9.4□□□□□ -0.9
TTC39B-208ENST00000512701 HNRNPMP52272 730 aaKnown RBP eCLIP9.4□□□□□ -0.99e-7■■■■□ 25.4
TTC39B-208ENST00000512701 KIF15Q9NS87 1388 aa9.4□□□□□ -0.9
TTC39B-208ENST00000512701 IBSPP21815 317 aaPredicted RBP9.4□□□□□ -0.9
TTC39B-208ENST00000512701 PLCD4Q9BRC7 762 aa9.4□□□□□ -0.9
TTC39B-208ENST00000512701 SKOR2Q2VWA4 1001 aaPredicted RBP9.4□□□□□ -0.91
TTC39B-208ENST00000512701 MARCH6O60337 910 aa9.4□□□□□ -0.91
TTC39B-208ENST00000512701 ZKSCAN2Q63HK3 967 aa9.39□□□□□ -0.91
TTC39B-208ENST00000512701 AKNAQ7Z591 1439 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms