RNA–Protein interactions for RNA: ENST00000512557.5

SLC41A3-216, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2

Gene SLC41A3, Length 3,828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-216ENST00000512557 SHROOM2Q13796 1616 aa12.16□□□□□ -0.46
SLC41A3-216ENST00000512557 CCDC7Q96M83 1385 aa12.15□□□□□ -0.46
SLC41A3-216ENST00000512557 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
SLC41A3-216ENST00000512557 KANK1Q14678 1352 aa12.14□□□□□ -0.47
SLC41A3-216ENST00000512557 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
SLC41A3-216ENST00000512557 RPRD2Q5VT52 1461 aaKnown RBP12.14□□□□□ -0.47
SLC41A3-216ENST00000512557 DNMT1P26358 1616 aaKnown RBP12.14□□□□□ -0.47
SLC41A3-216ENST00000512557 USP47Q96K76 1375 aa12.14□□□□□ -0.47
SLC41A3-216ENST00000512557 ADCY10Q96PN6 1610 aa12.14□□□□□ -0.47
SLC41A3-216ENST00000512557 ITSN2Q9NZM3 1697 aa12.13□□□□□ -0.47
SLC41A3-216ENST00000512557 TMC1Q8TDI8 760 aa12.13□□□□□ -0.47
SLC41A3-216ENST00000512557 UHRF1BP1LA0JNW5 1464 aa12.12□□□□□ -0.47
SLC41A3-216ENST00000512557 PZPP20742 1482 aa12.11□□□□□ -0.47
SLC41A3-216ENST00000512557 ROCK2O75116 1388 aaKnown RBP12.11□□□□□ -0.47
SLC41A3-216ENST00000512557 NBPF1Q3BBV0 1214 aa12.11□□□□□ -0.47
SLC41A3-216ENST00000512557 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
SLC41A3-216ENST00000512557 CCDC144AA2RUR9 1427 aa12.09□□□□□ -0.47
SLC41A3-216ENST00000512557 MBD5Q9P267 1494 aa12.09□□□□□ -0.47
SLC41A3-216ENST00000512557 ERICH6Q7L0X2 663 aa12.09□□□□□ -0.47
SLC41A3-216ENST00000512557 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
SLC41A3-216ENST00000512557 CDC42BPAQ5VT25 1732 aa12.08□□□□□ -0.48
SLC41A3-216ENST00000512557 ARHGEF12Q9NZN5 1544 aa12.08□□□□□ -0.48
SLC41A3-216ENST00000512557 CNTLNQ9NXG0 1405 aa12.07□□□□□ -0.48
SLC41A3-216ENST00000512557 CC2D1BQ5T0F9 858 aaKnown RBP12.06□□□□□ -0.48
SLC41A3-216ENST00000512557 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
SLC41A3-216ENST00000512557 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
SLC41A3-216ENST00000512557 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
SLC41A3-216ENST00000512557 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
SLC41A3-216ENST00000512557 TEX14Q8IWB6 1497 aa12.03□□□□□ -0.48
SLC41A3-216ENST00000512557 MYO5CQ9NQX4 1742 aa12.03□□□□□ -0.48
SLC41A3-216ENST00000512557 RBM19Q9Y4C8 960 aaKnown RBP12.02□□□□□ -0.49
SLC41A3-216ENST00000512557 ADGRL2O95490 1459 aa12.02□□□□□ -0.49
SLC41A3-216ENST00000512557 B4GALNT3Q6L9W6 998 aa12.01□□□□□ -0.49
SLC41A3-216ENST00000512557 PREX2Q70Z35 1606 aa12.01□□□□□ -0.49
SLC41A3-216ENST00000512557 CDC42BPBQ9Y5S2 1711 aa12.01□□□□□ -0.49
SLC41A3-216ENST00000512557 TSPOAP1O95153 1857 aa12.01□□□□□ -0.49
SLC41A3-216ENST00000512557 STK26Q9P289 416 aa12□□□□□ -0.49
SLC41A3-216ENST00000512557 FBXO31Q5XUX0 539 aaPredicted RBP11.99□□□□□ -0.49
SLC41A3-216ENST00000512557 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
SLC41A3-216ENST00000512557 PPP4R2Q9NY27 417 aa11.98□□□□□ -0.49
SLC41A3-216ENST00000512557 ZNF518AQ6AHZ1 1483 aa11.97□□□□□ -0.49
SLC41A3-216ENST00000512557 TMF1P82094 1093 aa11.97□□□□□ -0.49
SLC41A3-216ENST00000512557 SHANK2Q9UPX8 1470 aa11.97□□□□□ -0.49
SLC41A3-216ENST00000512557 PANK3Q9H999 370 aa11.96□□□□□ -0.49
SLC41A3-216ENST00000512557 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.49
SLC41A3-216ENST00000512557 ABCC1P33527 1531 aa11.96□□□□□ -0.5
SLC41A3-216ENST00000512557 FAM135AQ9P2D6 1515 aa11.95□□□□□ -0.5
SLC41A3-216ENST00000512557 CEBPAP49715 358 aaPredicted RBP11.95□□□□□ -0.5
SLC41A3-216ENST00000512557 A2MP01023 1474 aa11.95□□□□□ -0.5
SLC41A3-216ENST00000512557 CCDC136Q96JN2 1154 aa11.95□□□□□ -0.5
SLC41A3-216ENST00000512557 TRAK1Q9UPV9 953 aa11.94□□□□□ -0.5
SLC41A3-216ENST00000512557 ATP7AQ04656 1500 aa11.94□□□□□ -0.5
SLC41A3-216ENST00000512557 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
SLC41A3-216ENST00000512557 SPATA31E1Q6ZUB1 1445 aa11.94□□□□□ -0.5
SLC41A3-216ENST00000512557 TMEM132EQ6IEE7 984 aa11.94□□□□□ -0.5
SLC41A3-216ENST00000512557 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
SLC41A3-216ENST00000512557 CFAP70Q5T0N1 1121 aa11.94□□□□□ -0.5
SLC41A3-216ENST00000512557 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
SLC41A3-216ENST00000512557 CFAP65Q6ZU64 1925 aaKnown RBP11.93□□□□□ -0.5
SLC41A3-216ENST00000512557 KNSTRNQ9Y448 316 aa11.93□□□□□ -0.5
SLC41A3-216ENST00000512557 POGZQ7Z3K3 1410 aa11.93□□□□□ -0.5
SLC41A3-216ENST00000512557 ARHGEF5Q12774 1597 aa11.93□□□□□ -0.5
SLC41A3-216ENST00000512557 ANP32EQ9BTT0 268 aa11.93□□□□□ -0.5
SLC41A3-216ENST00000512557 ERBINQ96RT1 1412 aa11.91□□□□□ -0.5
SLC41A3-216ENST00000512557 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.5
SLC41A3-216ENST00000512557 IDI1Q13907 227 aa11.9□□□□□ -0.5
SLC41A3-216ENST00000512557 RALBP1Q15311 655 aa11.9□□□□□ -0.5
SLC41A3-216ENST00000512557 RTEL1-TNFRSF6BF6WH68 1400 aa11.89□□□□□ -0.51
SLC41A3-216ENST00000512557 TNNT2P45379 298 aaPredicted RBP11.89□□□□□ -0.51
SLC41A3-216ENST00000512557 MYBBP1AQ9BQG0 1328 aaKnown RBP11.89□□□□□ -0.51
SLC41A3-216ENST00000512557 ABCA9Q8IUA7 1624 aa11.89□□□□□ -0.51
SLC41A3-216ENST00000512557 PNISRQ8TF01 805 aaKnown RBP11.89□□□□□ -0.51
SLC41A3-216ENST00000512557 NLRP13Q86W25 1043 aa11.88□□□□□ -0.51
SLC41A3-216ENST00000512557 POGKQ9P215 609 aa11.88□□□□□ -0.51
SLC41A3-216ENST00000512557 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
SLC41A3-216ENST00000512557 NUDCQ9Y266 331 aa11.87□□□□□ -0.51
SLC41A3-216ENST00000512557 RALGAPBQ86X10 1494 aa11.87□□□□□ -0.51
SLC41A3-216ENST00000512557 ADGRF5Q8IZF2 1346 aa11.87□□□□□ -0.51
SLC41A3-216ENST00000512557 WDR43Q15061 677 aaKnown RBP eCLIP11.87□□□□□ -0.51
SLC41A3-216ENST00000512557 CROCC2H7BZ55 1655 aa11.86□□□□□ -0.51
SLC41A3-216ENST00000512557 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
SLC41A3-216ENST00000512557 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
SLC41A3-216ENST00000512557 PLA2R1Q13018 1463 aa11.86□□□□□ -0.51
SLC41A3-216ENST00000512557 NEO1Q92859 1461 aa11.86□□□□□ -0.51
SLC41A3-216ENST00000512557 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
SLC41A3-216ENST00000512557 ERICH6BQ5W0A0 696 aa11.86□□□□□ -0.51
SLC41A3-216ENST00000512557 DISP3Q9P2K9 1392 aa11.86□□□□□ -0.51
SLC41A3-216ENST00000512557 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
SLC41A3-216ENST00000512557 CDCA8Q53HL2 280 aa11.85□□□□□ -0.51
SLC41A3-216ENST00000512557 UHRF1BP1Q6BDS2 1440 aa11.84□□□□□ -0.51
SLC41A3-216ENST00000512557 TESK2Q96S53 571 aa11.84□□□□□ -0.51
SLC41A3-216ENST00000512557 VGFO15240 615 aaPredicted RBP11.83□□□□□ -0.52
SLC41A3-216ENST00000512557 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
SLC41A3-216ENST00000512557 UGGT1Q9NYU2 1555 aa11.82□□□□□ -0.52
SLC41A3-216ENST00000512557 CDCA7LQ96GN5 454 aa11.81□□□□□ -0.52
SLC41A3-216ENST00000512557 BCORL1Q5H9F3 1711 aa11.81□□□□□ -0.52
SLC41A3-216ENST00000512557 NPM2Q86SE8 214 aaKnown RBP11.81□□□□□ -0.52
SLC41A3-216ENST00000512557 MINK1Q8N4C8 1332 aaPredicted RBP11.8□□□□□ -0.52
SLC41A3-216ENST00000512557 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
SLC41A3-216ENST00000512557 CCDC146Q8IYE0 955 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms