RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
SNF8-211ENST00000512243 GTPBP6O43824 516 aaPredicted RBP15.28■□□□□ 0.04
SNF8-211ENST00000512243 EMP3P54852 163 aa15.28■□□□□ 0.04
SNF8-211ENST00000512243 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
SNF8-211ENST00000512243 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.04
SNF8-211ENST00000512243 RIMBP3CA6NJZ7 1639 aa15.25■□□□□ 0.03
SNF8-211ENST00000512243 RIMBP3BA6NNM3 1639 aa15.25■□□□□ 0.03
SNF8-211ENST00000512243 RIMBP3Q9UFD9 1639 aa15.25■□□□□ 0.03
SNF8-211ENST00000512243 RIMBP2O15034 1052 aa15.25■□□□□ 0.03
SNF8-211ENST00000512243 JPH4Q96JJ6 628 aa15.25■□□□□ 0.03
SNF8-211ENST00000512243 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
SNF8-211ENST00000512243 PRG4Q92954 1404 aaPredicted RBP15.24■□□□□ 0.03
SNF8-211ENST00000512243 KIAA0556O60303 1618 aa15.23■□□□□ 0.03
SNF8-211ENST00000512243 TNIKQ9UKE5 1360 aa15.23■□□□□ 0.03
SNF8-211ENST00000512243 HOXB1P14653 301 aaPredicted RBP15.22■□□□□ 0.03
SNF8-211ENST00000512243 CDAN1Q8IWY9 1227 aa15.22■□□□□ 0.03
SNF8-211ENST00000512243 ERCC6L2Q5T890 1561 aa15.22■□□□□ 0.03
SNF8-211ENST00000512243 SAMD9Q5K651 1589 aa15.21■□□□□ 0.03
SNF8-211ENST00000512243 CARMIL2Q6F5E8 1435 aa15.21■□□□□ 0.03
SNF8-211ENST00000512243 EFCAB5A4FU69 1503 aa15.21■□□□□ 0.03
SNF8-211ENST00000512243 FAM205CA6NFA0 338 aa15.2■□□□□ 0.02
SNF8-211ENST00000512243 DISP1Q96F81 1524 aa15.19■□□□□ 0.02
SNF8-211ENST00000512243 LOC105371045A0A1W2PR82 267 aa15.18■□□□□ 0.02
SNF8-211ENST00000512243 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
SNF8-211ENST00000512243 RANGAP1P46060 587 aaPredicted RBP15.16■□□□□ 0.02
SNF8-211ENST00000512243 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
SNF8-211ENST00000512243 ARSIQ5FYB1 569 aa15.15■□□□□ 0.02
SNF8-211ENST00000512243 GPR153Q6NV75 609 aa15.15■□□□□ 0.02
SNF8-211ENST00000512243 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
SNF8-211ENST00000512243 HS3ST6Q96QI5 342 aa15.15■□□□□ 0.02
SNF8-211ENST00000512243 ZSWIM6Q9HCJ5 1215 aa15.15■□□□□ 0.02
SNF8-211ENST00000512243 PLSCR2Q9NRY7 297 aa15.15■□□□□ 0.02
SNF8-211ENST00000512243 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
SNF8-211ENST00000512243 KHSRPQ92945 711 aaKnown RBP eCLIP15.14■□□□□ 0.018e-7■□□□□ 9
SNF8-211ENST00000512243 GPHNQ9NQX3 736 aaPredicted RBP15.14■□□□□ 0.01
SNF8-211ENST00000512243 CEP162Q5TB80 1403 aa15.13■□□□□ 0.01
SNF8-211ENST00000512243 BBXQ8WY36 941 aaPredicted RBP15.13■□□□□ 0.01
SNF8-211ENST00000512243 CLIP1P30622 1438 aa15.12■□□□□ 0.01
SNF8-211ENST00000512243 ARHGAP35Q9NRY4 1499 aa15.12■□□□□ 0.01
SNF8-211ENST00000512243 ERBB3P21860 1342 aa15.11■□□□□ 0.01
SNF8-211ENST00000512243 FHOD3Q2V2M9 1422 aa15.1■□□□□ 0.01
SNF8-211ENST00000512243 DSG2Q14126 1118 aa15.1■□□□□ 0.01
SNF8-211ENST00000512243 PLPP6Q8IY26 295 aa15.1■□□□□ 0.01
SNF8-211ENST00000512243 FOXK1P85037 733 aa15.09■□□□□ 0.01
SNF8-211ENST00000512243 P3H3Q8IVL6 736 aa15.08■□□□□ 0
SNF8-211ENST00000512243 PTPRGP23470 1445 aa15.08■□□□□ 0
SNF8-211ENST00000512243 CRISPLD2Q9H0B8 497 aa15.07■□□□□ 0
SNF8-211ENST00000512243 TTBK1Q5TCY1 1321 aaPredicted RBP15.06■□□□□ 0
SNF8-211ENST00000512243 NCKAP5LQ9HCH0 1330 aa15.06■□□□□ 0
SNF8-211ENST00000512243 VARS2Q5ST30 1063 aaKnown RBP15.05■□□□□ -0
SNF8-211ENST00000512243 PCDHGA4Q9Y5G9 962 aa15.05■□□□□ -0
SNF8-211ENST00000512243 SLC34A2O95436 690 aa15.04■□□□□ -0
SNF8-211ENST00000512243 RAPGEF6Q8TEU7 1601 aa15.03■□□□□ -0
SNF8-211ENST00000512243 NUDT7P0C024 238 aa15.03■□□□□ -0
SNF8-211ENST00000512243 ABCA8O94911 1581 aa15.02■□□□□ -0
SNF8-211ENST00000512243 FMN1Q68DA7 1419 aa15.02■□□□□ -0
SNF8-211ENST00000512243 CYB5RLQ6IPT4 315 aa15.02■□□□□ -0
SNF8-211ENST00000512243 CADPS2Q86UW7 1296 aa15.02■□□□□ -0
SNF8-211ENST00000512243 ADCY10Q96PN6 1610 aa15.02□□□□□ -0.01
SNF8-211ENST00000512243 ABCC2Q92887 1545 aa15.02□□□□□ -0.01
SNF8-211ENST00000512243 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.01□□□□□ -0.01
SNF8-211ENST00000512243 UACAQ9BZF9 1416 aa15□□□□□ -0.01
SNF8-211ENST00000512243 PLB1Q6P1J6 1458 aa15□□□□□ -0.01
SNF8-211ENST00000512243 PCF11O94913 1555 aaKnown RBP14.99□□□□□ -0.01
SNF8-211ENST00000512243 PDE4AP27815 886 aa14.99□□□□□ -0.01
SNF8-211ENST00000512243 PPP1R15BQ5SWA1 713 aa14.99□□□□□ -0.01
SNF8-211ENST00000512243 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
SNF8-211ENST00000512243 UHRF1BP1LA0JNW5 1464 aa14.98□□□□□ -0.01
SNF8-211ENST00000512243 LARP6Q9BRS8 491 aaKnown RBP14.98□□□□□ -0.01
SNF8-211ENST00000512243 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
SNF8-211ENST00000512243 ZNF316A6NFI3 1004 aaPredicted RBP14.96□□□□□ -0.01
SNF8-211ENST00000512243 KRTAP3-3Q9BYR6 98 aa14.96□□□□□ -0.01
SNF8-211ENST00000512243 KRTAP3-2Q9BYR7 98 aa14.96□□□□□ -0.01
SNF8-211ENST00000512243 PTCD2Q8WV60 388 aaKnown RBP14.95□□□□□ -0.02
SNF8-211ENST00000512243 ZCCHC11Q5TAX3 1644 aaKnown RBP14.95□□□□□ -0.02
SNF8-211ENST00000512243 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
SNF8-211ENST00000512243 PAXIP1Q6ZW49 1069 aaPredicted RBP14.94□□□□□ -0.02
SNF8-211ENST00000512243 UPF1Q92900 1129 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNF8-211ENST00000512243 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
SNF8-211ENST00000512243 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
SNF8-211ENST00000512243 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
SNF8-211ENST00000512243 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
SNF8-211ENST00000512243 LHX6Q9UPM6 363 aa14.92□□□□□ -0.02
SNF8-211ENST00000512243 NUP153P49790 1475 aaKnown RBP14.92□□□□□ -0.02
SNF8-211ENST00000512243 LRRIQ1Q96JM4 1722 aa14.92□□□□□ -0.02
SNF8-211ENST00000512243 KDM5BQ9UGL1 1544 aa14.91□□□□□ -0.02
SNF8-211ENST00000512243 CCDC18Q5T9S5 1454 aa14.88□□□□□ -0.03
SNF8-211ENST00000512243 MFSD10Q14728 455 aa14.87□□□□□ -0.03
SNF8-211ENST00000512243 ZNF687Q8N1G0 1237 aa14.87□□□□□ -0.03
SNF8-211ENST00000512243 OXER1Q8TDS5 423 aa14.87□□□□□ -0.03
SNF8-211ENST00000512243 ATP1B4Q9UN42 357 aaPredicted RBP14.87□□□□□ -0.03
SNF8-211ENST00000512243 EPRSP07814 1512 aaKnown RBP14.87□□□□□ -0.03
SNF8-211ENST00000512243 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
SNF8-211ENST00000512243 CFAP43Q8NDM7 1665 aa14.86□□□□□ -0.03
SNF8-211ENST00000512243 MAPKBP1O60336 1514 aa14.86□□□□□ -0.03
SNF8-211ENST00000512243 ATP10BO94823 1461 aa14.85□□□□□ -0.03
SNF8-211ENST00000512243 KDM4FA0A1W2PPD8 638 aa14.85□□□□□ -0.03
SNF8-211ENST00000512243 TBC1D12O60347 775 aa14.85□□□□□ -0.03
SNF8-211ENST00000512243 ARID3CA6NKF2 412 aa14.84□□□□□ -0.03
SNF8-211ENST00000512243 SPNS2Q8IVW8 549 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms