RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 KIF7Q2M1P5 1343 aa17■□□□□ 0.31
PCDHA4-202ENST00000512229 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
PCDHA4-202ENST00000512229 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
PCDHA4-202ENST00000512229 RCAN3Q9UKA8 241 aa16.98■□□□□ 0.31
PCDHA4-202ENST00000512229 ERICH6BQ5W0A0 696 aa16.97■□□□□ 0.31
PCDHA4-202ENST00000512229 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
PCDHA4-202ENST00000512229 MS4A1P11836 297 aa16.97■□□□□ 0.31
PCDHA4-202ENST00000512229 ROCK1Q13464 1354 aa16.97■□□□□ 0.31
PCDHA4-202ENST00000512229 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.31
PCDHA4-202ENST00000512229 NBPF8Q3BBV2 869 aa16.95■□□□□ 0.3
PCDHA4-202ENST00000512229 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
PCDHA4-202ENST00000512229 PDE3BQ13370 1112 aa16.94■□□□□ 0.3
PCDHA4-202ENST00000512229 EVC2Q86UK5 1308 aa16.93■□□□□ 0.3
PCDHA4-202ENST00000512229 RGS3P49796 1198 aa16.92■□□□□ 0.3
PCDHA4-202ENST00000512229 ARHGEF11O15085 1522 aa16.92■□□□□ 0.3
PCDHA4-202ENST00000512229 A0A0G2JS52 829 aa16.92■□□□□ 0.3
PCDHA4-202ENST00000512229 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
PCDHA4-202ENST00000512229 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
PCDHA4-202ENST00000512229 ABCC5O15440 1437 aa16.9■□□□□ 0.3
PCDHA4-202ENST00000512229 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.3
PCDHA4-202ENST00000512229 CENPJQ9HC77 1338 aaPredicted RBP16.89■□□□□ 0.29
PCDHA4-202ENST00000512229 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.29
PCDHA4-202ENST00000512229 NBPF1Q3BBV0 1214 aa16.89■□□□□ 0.29
PCDHA4-202ENST00000512229 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
PCDHA4-202ENST00000512229 NUTM2FA1L443 756 aa16.88■□□□□ 0.29
PCDHA4-202ENST00000512229 CFAP70Q5T0N1 1121 aa16.88■□□□□ 0.29
PCDHA4-202ENST00000512229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.87■□□□□ 0.29
PCDHA4-202ENST00000512229 CGNL1Q0VF96 1302 aa16.87■□□□□ 0.29
PCDHA4-202ENST00000512229 RAPGEF3O95398 923 aa16.87■□□□□ 0.29
PCDHA4-202ENST00000512229 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
PCDHA4-202ENST00000512229 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
PCDHA4-202ENST00000512229 CNTLNQ9NXG0 1405 aa16.86■□□□□ 0.29
PCDHA4-202ENST00000512229 PTPN23Q9H3S7 1636 aa16.86■□□□□ 0.29
PCDHA4-202ENST00000512229 NBR1Q14596 966 aa16.86■□□□□ 0.29
PCDHA4-202ENST00000512229 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
PCDHA4-202ENST00000512229 RTF1Q92541 710 aaKnown RBP16.85■□□□□ 0.29
PCDHA4-202ENST00000512229 NCOA1Q15788 1441 aa16.85■□□□□ 0.29
PCDHA4-202ENST00000512229 TMEM132EQ6IEE7 984 aa16.85■□□□□ 0.29
PCDHA4-202ENST00000512229 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
PCDHA4-202ENST00000512229 CCDC141Q6ZP82 1450 aa16.84■□□□□ 0.29
PCDHA4-202ENST00000512229 CALD1Q05682 793 aaKnown RBP16.84■□□□□ 0.29
PCDHA4-202ENST00000512229 AKNAQ7Z591 1439 aa16.82■□□□□ 0.28
PCDHA4-202ENST00000512229 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
PCDHA4-202ENST00000512229 BECN1Q14457 450 aa16.82■□□□□ 0.28
PCDHA4-202ENST00000512229 IPO8O15397 1037 aaKnown RBP16.81■□□□□ 0.28
PCDHA4-202ENST00000512229 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
PCDHA4-202ENST00000512229 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
PCDHA4-202ENST00000512229 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
PCDHA4-202ENST00000512229 APAF1O14727 1248 aa16.77■□□□□ 0.28
PCDHA4-202ENST00000512229 ARXQ96QS3 562 aa16.77■□□□□ 0.28
PCDHA4-202ENST00000512229 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.28
PCDHA4-202ENST00000512229 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
PCDHA4-202ENST00000512229 KIF14Q15058 1648 aa16.76■□□□□ 0.27
PCDHA4-202ENST00000512229 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
PCDHA4-202ENST00000512229 COG3Q96JB2 828 aa16.75■□□□□ 0.27
PCDHA4-202ENST00000512229 AMPHP49418 695 aa16.75■□□□□ 0.27
PCDHA4-202ENST00000512229 ATP10BO94823 1461 aa16.75■□□□□ 0.27
PCDHA4-202ENST00000512229 NUP153P49790 1475 aaKnown RBP16.74■□□□□ 0.27
PCDHA4-202ENST00000512229 CD109Q6YHK3 1445 aa16.74■□□□□ 0.27
PCDHA4-202ENST00000512229 RBM19Q9Y4C8 960 aaKnown RBP16.74■□□□□ 0.27
PCDHA4-202ENST00000512229 SMC4Q9NTJ3 1288 aa16.74■□□□□ 0.27
PCDHA4-202ENST00000512229 PTPRKQ15262 1439 aa16.73■□□□□ 0.27
PCDHA4-202ENST00000512229 UGGT2Q9NYU1 1516 aa16.72■□□□□ 0.27
PCDHA4-202ENST00000512229 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
PCDHA4-202ENST00000512229 NGEFQ8N5V2 710 aa16.72■□□□□ 0.27
PCDHA4-202ENST00000512229 CABP2Q9NPB3 220 aa16.72■□□□□ 0.27
PCDHA4-202ENST00000512229 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
PCDHA4-202ENST00000512229 LMOD3Q0VAK6 560 aa16.71■□□□□ 0.27
PCDHA4-202ENST00000512229 E9PSI1 815 aa16.71■□□□□ 0.27
PCDHA4-202ENST00000512229 CASC1Q6TDU7 716 aa16.71■□□□□ 0.27
PCDHA4-202ENST00000512229 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
PCDHA4-202ENST00000512229 ADAMTS12P58397 1594 aa16.7■□□□□ 0.26
PCDHA4-202ENST00000512229 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
PCDHA4-202ENST00000512229 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
PCDHA4-202ENST00000512229 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
PCDHA4-202ENST00000512229 RAPGEF6Q8TEU7 1601 aa16.69■□□□□ 0.26
PCDHA4-202ENST00000512229 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-202ENST00000512229 CSB-PGBD3P0DP91 1061 aa16.68■□□□□ 0.26
PCDHA4-202ENST00000512229 ANP32BQ92688 251 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-202ENST00000512229 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
PCDHA4-202ENST00000512229 CTTNBP2Q8WZ74 1663 aa16.68■□□□□ 0.26
PCDHA4-202ENST00000512229 ADGRL1O94910 1474 aa16.68■□□□□ 0.26
PCDHA4-202ENST00000512229 DIAPH1O60610 1272 aaKnown RBP16.67■□□□□ 0.26
PCDHA4-202ENST00000512229 GGNBP2Q9H3C7 697 aa16.67■□□□□ 0.26
PCDHA4-202ENST00000512229 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
PCDHA4-202ENST00000512229 PLIN1O60240 522 aa16.66■□□□□ 0.26
PCDHA4-202ENST00000512229 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
PCDHA4-202ENST00000512229 SLC12A5Q9H2X9 1139 aa16.66■□□□□ 0.26
PCDHA4-202ENST00000512229 ADAMTS8Q9UP79 889 aa16.66■□□□□ 0.26
PCDHA4-202ENST00000512229 OS9Q13438 667 aaPredicted RBP16.65■□□□□ 0.26
PCDHA4-202ENST00000512229 CHMP4AQ9BY43 222 aa16.65■□□□□ 0.26
PCDHA4-202ENST00000512229 RPRD2Q5VT52 1461 aaKnown RBP16.65■□□□□ 0.26
PCDHA4-202ENST00000512229 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
PCDHA4-202ENST00000512229 ERBINQ96RT1 1412 aa16.65■□□□□ 0.26
PCDHA4-202ENST00000512229 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
PCDHA4-202ENST00000512229 STK31Q9BXU1 1019 aa16.64■□□□□ 0.25
PCDHA4-202ENST00000512229 PMFBP1Q8TBY8 1022 aa16.64■□□□□ 0.25
PCDHA4-202ENST00000512229 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
PCDHA4-202ENST00000512229 MTHFSP49914 203 aa16.64■□□□□ 0.25
PCDHA4-202ENST00000512229 TXNDC2Q86VQ3 553 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms