RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 ZBED2Q9BTP6 218 aa14.76□□□□□ -0.05
PDGFC-207ENST00000511985 RBM33Q96EV2 1170 aaKnown RBP14.75□□□□□ -0.05
PDGFC-207ENST00000511985 COL9A1P20849 921 aa14.74□□□□□ -0.05
PDGFC-207ENST00000511985 NBR1Q14596 966 aa14.73□□□□□ -0.05
PDGFC-207ENST00000511985 SLC4A5Q9BY07 1137 aa14.72□□□□□ -0.05
PDGFC-207ENST00000511985 PPP1R3GB7ZBB8 358 aa14.71□□□□□ -0.05
PDGFC-207ENST00000511985 C6orf132Q5T0Z8 1188 aa14.71□□□□□ -0.05
PDGFC-207ENST00000511985 KCNV2Q8TDN2 545 aa14.71□□□□□ -0.05
PDGFC-207ENST00000511985 GRXCR2A6NFK2 248 aa14.7□□□□□ -0.06
PDGFC-207ENST00000511985 STAC3Q96MF2 364 aa14.69□□□□□ -0.06
PDGFC-207ENST00000511985 PROX2Q3B8N5 592 aa14.68□□□□□ -0.06
PDGFC-207ENST00000511985 BHMG1C9JSJ3 638 aaPredicted RBP14.66□□□□□ -0.06
PDGFC-207ENST00000511985 PRIM1P49642 420 aaKnown RBP14.66□□□□□ -0.06
PDGFC-207ENST00000511985 EN1Q05925 392 aaPredicted RBP14.66□□□□□ -0.06
PDGFC-207ENST00000511985 TSR1Q2NL82 804 aaKnown RBP14.66□□□□□ -0.06
PDGFC-207ENST00000511985 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
PDGFC-207ENST00000511985 MAP3K7O43318 606 aa14.64□□□□□ -0.07
PDGFC-207ENST00000511985 ARHGEF1Q92888 912 aaKnown RBP14.62□□□□□ -0.07
PDGFC-207ENST00000511985 KCTD12Q96CX2 325 aaKnown RBP14.62□□□□□ -0.07
PDGFC-207ENST00000511985 OSBPP22059 807 aa14.6□□□□□ -0.07
PDGFC-207ENST00000511985 MRPL50Q8N5N7 158 aaKnown RBP14.59□□□□□ -0.07
PDGFC-207ENST00000511985 RABGEF1Q9UJ41 708 aa14.57□□□□□ -0.08
PDGFC-207ENST00000511985 NBPF3Q9H094 633 aa14.56□□□□□ -0.08
PDGFC-207ENST00000511985 KIAA1468Q9P260 1216 aa14.56□□□□□ -0.08
PDGFC-207ENST00000511985 MLLT3P42568 568 aaPredicted RBP14.55□□□□□ -0.08
PDGFC-207ENST00000511985 GOLGA8CPA6NN73 597 aa14.53□□□□□ -0.08
PDGFC-207ENST00000511985 TRIM6-TRIM34B2RNG4 842 aa14.53□□□□□ -0.08
PDGFC-207ENST00000511985 P3H3Q8IVL6 736 aa14.53□□□□□ -0.08
PDGFC-207ENST00000511985 CDHR5Q9HBB8 845 aa14.53□□□□□ -0.08
PDGFC-207ENST00000511985 HCSTQ9UBK5 93 aa14.53□□□□□ -0.08
PDGFC-207ENST00000511985 WNT2BQ93097 391 aa14.5□□□□□ -0.09
PDGFC-207ENST00000511985 KDM2AQ9Y2K7 1162 aa14.5□□□□□ -0.09
PDGFC-207ENST00000511985 ONECUT3O60422 494 aaPredicted RBP14.49□□□□□ -0.09
PDGFC-207ENST00000511985 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
PDGFC-207ENST00000511985 PTPN5P54829 565 aa14.49□□□□□ -0.09
PDGFC-207ENST00000511985 SEPT9Q9UHD8 586 aaPredicted RBP14.49□□□□□ -0.09
PDGFC-207ENST00000511985 TSKSQ9UJT2 592 aa14.49□□□□□ -0.09
PDGFC-207ENST00000511985 THSD4Q6ZMP0 1018 aa14.47□□□□□ -0.09
PDGFC-207ENST00000511985 CDCA7LQ96GN5 454 aa14.47□□□□□ -0.09
PDGFC-207ENST00000511985 SEMA3EO15041 775 aa14.45□□□□□ -0.1
PDGFC-207ENST00000511985 PRSS12P56730 875 aa14.45□□□□□ -0.1
PDGFC-207ENST00000511985 FAM198AQ9UFP1 575 aa14.45□□□□□ -0.1
PDGFC-207ENST00000511985 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
PDGFC-207ENST00000511985 LAPTM4BQ86VI4 370 aa14.42□□□□□ -0.1
PDGFC-207ENST00000511985 PACS2Q86VP3 889 aa14.41□□□□□ -0.1
PDGFC-207ENST00000511985 ZFRQ96KR1 1074 aaKnown RBP14.41□□□□□ -0.1
PDGFC-207ENST00000511985 NPDC1Q9NQX5 325 aaPredicted RBP14.41□□□□□ -0.1
PDGFC-207ENST00000511985 SMAPO00193 183 aa14.4□□□□□ -0.1
PDGFC-207ENST00000511985 C3orf80F5H4A9 247 aa14.39□□□□□ -0.11
PDGFC-207ENST00000511985 ANKK1Q8NFD2 765 aa14.39□□□□□ -0.11
PDGFC-207ENST00000511985 BCAMP50895 628 aa14.38□□□□□ -0.11
PDGFC-207ENST00000511985 FAM98CQ17RN3 349 aaKnown RBP14.38□□□□□ -0.11
PDGFC-207ENST00000511985 VSIG10Q8N0Z9 540 aa14.36□□□□□ -0.11
PDGFC-207ENST00000511985 PLA2G2EQ9NZK7 142 aa14.35□□□□□ -0.11
PDGFC-207ENST00000511985 SOWAHBA6NEL2 793 aa14.34□□□□□ -0.11
PDGFC-207ENST00000511985 PADI6Q6TGC4 694 aa14.34□□□□□ -0.11
PDGFC-207ENST00000511985 TATDN2Q93075 761 aa14.34□□□□□ -0.11
PDGFC-207ENST00000511985 PNMA3Q9UL41 463 aa14.34□□□□□ -0.11
PDGFC-207ENST00000511985 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
PDGFC-207ENST00000511985 NUDT18Q6ZVK8 323 aa14.31□□□□□ -0.12
PDGFC-207ENST00000511985 NUTM2FA1L443 756 aa14.3□□□□□ -0.12
PDGFC-207ENST00000511985 TESPA1A2RU30 521 aaPredicted RBP14.3□□□□□ -0.12
PDGFC-207ENST00000511985 NBPF26B4DH59 902 aa14.3□□□□□ -0.12
PDGFC-207ENST00000511985 TTC13Q8NBP0 860 aa14.3□□□□□ -0.12
PDGFC-207ENST00000511985 PTGDRQ13258 359 aa14.29□□□□□ -0.12
PDGFC-207ENST00000511985 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.28□□□□□ -0.12
PDGFC-207ENST00000511985 LRCH3Q96II8 777 aa14.27□□□□□ -0.13
PDGFC-207ENST00000511985 WBP1LQ9NX94 342 aa14.26□□□□□ -0.13
PDGFC-207ENST00000511985 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
PDGFC-207ENST00000511985 SAMD7Q7Z3H4 446 aa14.25□□□□□ -0.13
PDGFC-207ENST00000511985 HPS5Q9UPZ3 1129 aa14.24□□□□□ -0.13
PDGFC-207ENST00000511985 TSR3Q9UJK0 312 aaKnown RBP14.21□□□□□ -0.13
PDGFC-207ENST00000511985 SMYD5Q6GMV2 418 aa14.19□□□□□ -0.14
PDGFC-207ENST00000511985 FCHSD2O94868 740 aa14.18□□□□□ -0.14
PDGFC-207ENST00000511985 FAM161AQ3B820 660 aa14.17□□□□□ -0.14
PDGFC-207ENST00000511985 EYA1Q99502 592 aa14.17□□□□□ -0.14
PDGFC-207ENST00000511985 PPP4CP60510 307 aa14.16□□□□□ -0.14
PDGFC-207ENST00000511985 RNF40O75150 1001 aa14.14□□□□□ -0.15
PDGFC-207ENST00000511985 SWT1Q5T5J6 900 aaKnown RBP14.14□□□□□ -0.15
PDGFC-207ENST00000511985 NYAP1Q6ZVC0 841 aa14.14□□□□□ -0.15
PDGFC-207ENST00000511985 HDGFP51858 240 aaKnown RBP14.13□□□□□ -0.15
PDGFC-207ENST00000511985 ADGRG1Q9Y653 693 aa14.13□□□□□ -0.15
PDGFC-207ENST00000511985 GPR37O15354 613 aa14.09□□□□□ -0.15
PDGFC-207ENST00000511985 HIC1Q14526 733 aa14.09□□□□□ -0.15
PDGFC-207ENST00000511985 FECHP22830 423 aa14.08□□□□□ -0.16
PDGFC-207ENST00000511985 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
PDGFC-207ENST00000511985 ITGBL1O95965 494 aaPredicted RBP14.07□□□□□ -0.16
PDGFC-207ENST00000511985 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
PDGFC-207ENST00000511985 GNPATO15228 680 aa14.05□□□□□ -0.16
PDGFC-207ENST00000511985 RCCD1A6NED2 376 aa14.04□□□□□ -0.16
PDGFC-207ENST00000511985 DNAJB2P25686 324 aa14.04□□□□□ -0.16
PDGFC-207ENST00000511985 SLF2Q8IX21 1173 aa14.04□□□□□ -0.16
PDGFC-207ENST00000511985 GPIHBP1Q8IV16 184 aa14.03□□□□□ -0.16
PDGFC-207ENST00000511985 APLP1P51693 650 aa14.02□□□□□ -0.17
PDGFC-207ENST00000511985 TMEM134Q9H6X4 195 aa14.01□□□□□ -0.17
PDGFC-207ENST00000511985 A0A0G2JS52 829 aa14□□□□□ -0.17
PDGFC-207ENST00000511985 KCNC4Q03721 635 aa14□□□□□ -0.17
PDGFC-207ENST00000511985 PXYLP1Q8TE99 480 aa14□□□□□ -0.17
PDGFC-207ENST00000511985 OATP04181 439 aa13.98□□□□□ -0.17
PDGFC-207ENST00000511985 TJAP1Q5JTD0 557 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms