RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 ZBED2Q9BTP6 218 aa14.51□□□□□ -0.09
SMN2-211ENST00000511873 ARIH1Q9Y4X5 557 aaPredicted RBP14.5□□□□□ -0.09
SMN2-211ENST00000511873 PPP1R3GB7ZBB8 358 aa14.47□□□□□ -0.09
SMN2-211ENST00000511873 C6orf132Q5T0Z8 1188 aa14.45□□□□□ -0.1
SMN2-211ENST00000511873 COL9A1P20849 921 aa14.44□□□□□ -0.1
SMN2-211ENST00000511873 RBM33Q96EV2 1170 aaKnown RBP14.44□□□□□ -0.1
SMN2-211ENST00000511873 BHMG1C9JSJ3 638 aaPredicted RBP14.43□□□□□ -0.1
SMN2-211ENST00000511873 HCSTQ9UBK5 93 aa14.43□□□□□ -0.1
SMN2-211ENST00000511873 NBR1Q14596 966 aa14.42□□□□□ -0.1
SMN2-211ENST00000511873 KCTD12Q96CX2 325 aaKnown RBP14.42□□□□□ -0.1
SMN2-211ENST00000511873 MRPL50Q8N5N7 158 aaKnown RBP14.4□□□□□ -0.1
SMN2-211ENST00000511873 PROX2Q3B8N5 592 aa14.39□□□□□ -0.11
SMN2-211ENST00000511873 NBPF3Q9H094 633 aa14.39□□□□□ -0.11
SMN2-211ENST00000511873 GRXCR2A6NFK2 248 aa14.38□□□□□ -0.11
SMN2-211ENST00000511873 GOLGA8CPA6NN73 597 aa14.38□□□□□ -0.11
SMN2-211ENST00000511873 MAP3K7O43318 606 aa14.37□□□□□ -0.11
SMN2-211ENST00000511873 PLCB2Q00722 1185 aa14.37□□□□□ -0.11
SMN2-211ENST00000511873 EN1Q05925 392 aaPredicted RBP14.37□□□□□ -0.11
SMN2-211ENST00000511873 RABGEF1Q9UJ41 708 aa14.37□□□□□ -0.11
SMN2-211ENST00000511873 TSR1Q2NL82 804 aaKnown RBP14.33□□□□□ -0.12
SMN2-211ENST00000511873 ARHGEF1Q92888 912 aaKnown RBP14.32□□□□□ -0.12
SMN2-211ENST00000511873 KIAA1468Q9P260 1216 aa14.32□□□□□ -0.12
SMN2-211ENST00000511873 ONECUT3O60422 494 aaPredicted RBP14.31□□□□□ -0.12
SMN2-211ENST00000511873 WNT2BQ93097 391 aa14.31□□□□□ -0.12
SMN2-211ENST00000511873 PTPN5P54829 565 aa14.29□□□□□ -0.12
SMN2-211ENST00000511873 KCNV2Q8TDN2 545 aa14.29□□□□□ -0.12
SMN2-211ENST00000511873 TRIM6-TRIM34B2RNG4 842 aa14.28□□□□□ -0.12
SMN2-211ENST00000511873 OSBPP22059 807 aa14.27□□□□□ -0.13
SMN2-211ENST00000511873 PRIM1P49642 420 aaKnown RBP14.26□□□□□ -0.13
SMN2-211ENST00000511873 THSD4Q6ZMP0 1018 aa14.26□□□□□ -0.13
SMN2-211ENST00000511873 LAPTM4BQ86VI4 370 aa14.26□□□□□ -0.13
SMN2-211ENST00000511873 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
SMN2-211ENST00000511873 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
SMN2-211ENST00000511873 P3H3Q8IVL6 736 aa14.22□□□□□ -0.13
SMN2-211ENST00000511873 PLA2G2EQ9NZK7 142 aa14.22□□□□□ -0.13
SMN2-211ENST00000511873 ANKK1Q8NFD2 765 aa14.21□□□□□ -0.13
SMN2-211ENST00000511873 SEPT9Q9UHD8 586 aaPredicted RBP14.21□□□□□ -0.13
SMN2-211ENST00000511873 PRSS12P56730 875 aa14.2□□□□□ -0.14
SMN2-211ENST00000511873 CDCA7LQ96GN5 454 aa14.2□□□□□ -0.14
SMN2-211ENST00000511873 TSKSQ9UJT2 592 aa14.2□□□□□ -0.14
SMN2-211ENST00000511873 ZFRQ96KR1 1074 aaKnown RBP14.19□□□□□ -0.14
SMN2-211ENST00000511873 MLLT3P42568 568 aaPredicted RBP14.17□□□□□ -0.14
SMN2-211ENST00000511873 HAP1P54257 671 aaPredicted RBP14.17□□□□□ -0.14
SMN2-211ENST00000511873 FAM98CQ17RN3 349 aaKnown RBP14.16□□□□□ -0.14
SMN2-211ENST00000511873 CDHR5Q9HBB8 845 aa14.16□□□□□ -0.14
SMN2-211ENST00000511873 SOWAHBA6NEL2 793 aa14.13□□□□□ -0.15
SMN2-211ENST00000511873 BCAMP50895 628 aa14.13□□□□□ -0.15
SMN2-211ENST00000511873 FAM198AQ9UFP1 575 aa14.11□□□□□ -0.15
SMN2-211ENST00000511873 NPDC1Q9NQX5 325 aaPredicted RBP14.09□□□□□ -0.15
SMN2-211ENST00000511873 SMAPO00193 183 aa14.08□□□□□ -0.16
SMN2-211ENST00000511873 TATDN2Q93075 761 aa14.08□□□□□ -0.16
SMN2-211ENST00000511873 RBM27Q9P2N5 1060 aaKnown RBP14.08□□□□□ -0.16
SMN2-211ENST00000511873 SEMA3EO15041 775 aa14.07□□□□□ -0.16
SMN2-211ENST00000511873 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.07□□□□□ -0.16
SMN2-211ENST00000511873 PNMA3Q9UL41 463 aa14.07□□□□□ -0.16
SMN2-211ENST00000511873 NBPF26B4DH59 902 aa14.06□□□□□ -0.16
SMN2-211ENST00000511873 LRCH3Q96II8 777 aa14.06□□□□□ -0.16
SMN2-211ENST00000511873 WBP1LQ9NX94 342 aa14.04□□□□□ -0.16
SMN2-211ENST00000511873 C3orf80F5H4A9 247 aa14.03□□□□□ -0.16
SMN2-211ENST00000511873 NUDT18Q6ZVK8 323 aa14.03□□□□□ -0.16
SMN2-211ENST00000511873 PADI6Q6TGC4 694 aa14.02□□□□□ -0.17
SMN2-211ENST00000511873 NYAP1Q6ZVC0 841 aa14.02□□□□□ -0.17
SMN2-211ENST00000511873 TSR3Q9UJK0 312 aaKnown RBP14.02□□□□□ -0.17
SMN2-211ENST00000511873 TTC13Q8NBP0 860 aa14.01□□□□□ -0.17
SMN2-211ENST00000511873 HPS5Q9UPZ3 1129 aa14.01□□□□□ -0.17
SMN2-211ENST00000511873 SAMD7Q7Z3H4 446 aa14□□□□□ -0.17
SMN2-211ENST00000511873 KDM2AQ9Y2K7 1162 aa14□□□□□ -0.17
SMN2-211ENST00000511873 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
SMN2-211ENST00000511873 HDGFP51858 240 aaKnown RBP13.99□□□□□ -0.17
SMN2-211ENST00000511873 PTGDRQ13258 359 aa13.98□□□□□ -0.17
SMN2-211ENST00000511873 PPP4CP60510 307 aa13.97□□□□□ -0.17
SMN2-211ENST00000511873 IFFO2Q5TF58 517 aa13.97□□□□□ -0.17
SMN2-211ENST00000511873 SMYD5Q6GMV2 418 aa13.94□□□□□ -0.18
SMN2-211ENST00000511873 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
SMN2-211ENST00000511873 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
SMN2-211ENST00000511873 ITGBL1O95965 494 aaPredicted RBP13.9□□□□□ -0.18
SMN2-211ENST00000511873 FCHSD2O94868 740 aa13.89□□□□□ -0.19
SMN2-211ENST00000511873 EYA1Q99502 592 aa13.89□□□□□ -0.19
SMN2-211ENST00000511873 RNF40O75150 1001 aa13.88□□□□□ -0.19
SMN2-211ENST00000511873 RBM26Q5T8P6 1007 aaKnown RBP13.88□□□□□ -0.19
SMN2-211ENST00000511873 SWT1Q5T5J6 900 aaKnown RBP13.86□□□□□ -0.19
SMN2-211ENST00000511873 KCNC4Q03721 635 aa13.85□□□□□ -0.19
SMN2-211ENST00000511873 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
SMN2-211ENST00000511873 A0A0G2JS52 829 aa13.83□□□□□ -0.2
SMN2-211ENST00000511873 SLC4A3P48751 1232 aa13.83□□□□□ -0.2
SMN2-211ENST00000511873 SLF2Q8IX21 1173 aa13.83□□□□□ -0.2
SMN2-211ENST00000511873 ADGRG1Q9Y653 693 aa13.83□□□□□ -0.2
SMN2-211ENST00000511873 NECTIN2Q92692 538 aa13.82□□□□□ -0.2
SMN2-211ENST00000511873 HIC1Q14526 733 aa13.8□□□□□ -0.2
SMN2-211ENST00000511873 FAM161AQ3B820 660 aa13.8□□□□□ -0.2
SMN2-211ENST00000511873 DNAJB2P25686 324 aa13.79□□□□□ -0.2
SMN2-211ENST00000511873 RGS20O76081 388 aa13.77□□□□□ -0.21
SMN2-211ENST00000511873 RCCD1A6NED2 376 aa13.76□□□□□ -0.21
SMN2-211ENST00000511873 OATP04181 439 aa13.76□□□□□ -0.21
SMN2-211ENST00000511873 APLP1P51693 650 aa13.76□□□□□ -0.21
SMN2-211ENST00000511873 TJAP1Q5JTD0 557 aa13.75□□□□□ -0.21
SMN2-211ENST00000511873 TMEM134Q9H6X4 195 aa13.75□□□□□ -0.21
SMN2-211ENST00000511873 GNPATO15228 680 aa13.74□□□□□ -0.21
SMN2-211ENST00000511873 MTRQ99707 1265 aa13.73□□□□□ -0.21
SMN2-211ENST00000511873 IL21Q9HBE4 155 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms