RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 PPP1R3GB7ZBB8 358 aa7.98□□□□□ -1.13
XRCC4-205ENST00000511817 RGL2O15211 777 aa7.98□□□□□ -1.13
XRCC4-205ENST00000511817 INSM1Q01101 510 aaPredicted RBP7.98□□□□□ -1.13
XRCC4-205ENST00000511817 POTECB2RU33 542 aa7.96□□□□□ -1.13
XRCC4-205ENST00000511817 WIPF1O43516 503 aa7.95□□□□□ -1.14
XRCC4-205ENST00000511817 EVI5O60447 810 aa7.95□□□□□ -1.14
XRCC4-205ENST00000511817 PROX2Q3B8N5 592 aa7.95□□□□□ -1.14
XRCC4-205ENST00000511817 MYT1Q01538 1121 aa7.94□□□□□ -1.14
XRCC4-205ENST00000511817 PPP1R15BQ5SWA1 713 aa7.94□□□□□ -1.14
XRCC4-205ENST00000511817 CRISPLD2Q9H0B8 497 aa7.94□□□□□ -1.14
XRCC4-205ENST00000511817 ZFRQ96KR1 1074 aaKnown RBP7.93□□□□□ -1.14
XRCC4-205ENST00000511817 DGAT1O75907 488 aa7.92□□□□□ -1.14
XRCC4-205ENST00000511817 ONECUT3O60422 494 aaPredicted RBP7.91□□□□□ -1.14
XRCC4-205ENST00000511817 WFS1O76024 890 aa7.91□□□□□ -1.14
XRCC4-205ENST00000511817 COL9A1P20849 921 aa7.91□□□□□ -1.14
XRCC4-205ENST00000511817 SUZ12Q15022 739 aaKnown RBP7.91□□□□□ -1.14
XRCC4-205ENST00000511817 PKDCCQ504Y2 493 aa7.9□□□□□ -1.14
XRCC4-205ENST00000511817 PPP1R18Q6NYC8 613 aa7.9□□□□□ -1.14
XRCC4-205ENST00000511817 TSR3Q9UJK0 312 aaKnown RBP7.9□□□□□ -1.14
XRCC4-205ENST00000511817 KIAA1468Q9P260 1216 aa7.89□□□□□ -1.15
XRCC4-205ENST00000511817 PKD2Q13563 968 aa7.89□□□□□ -1.15
XRCC4-205ENST00000511817 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.88□□□□□ -1.15
XRCC4-205ENST00000511817 PCDHGA10Q9Y5H3 936 aa7.88□□□□□ -1.15
XRCC4-205ENST00000511817 TJAP1Q5JTD0 557 aa7.86□□□□□ -1.15
XRCC4-205ENST00000511817 FBXW7Q969H0 707 aa7.86□□□□□ -1.15
XRCC4-205ENST00000511817 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.85□□□□□ -1.15
XRCC4-205ENST00000511817 HPS5Q9UPZ3 1129 aa7.85□□□□□ -1.15
XRCC4-205ENST00000511817 PDE4AP27815 886 aa7.85□□□□□ -1.15
XRCC4-205ENST00000511817 TYW1BQ6NUM6 668 aa7.85□□□□□ -1.15
XRCC4-205ENST00000511817 HS6ST3Q8IZP7 471 aa7.85□□□□□ -1.15
XRCC4-205ENST00000511817 MAP3K9P80192 1104 aa7.84□□□□□ -1.15
XRCC4-205ENST00000511817 FAM98CQ17RN3 349 aaKnown RBP7.84□□□□□ -1.15
XRCC4-205ENST00000511817 SEPT9Q9UHD8 586 aaPredicted RBP7.84□□□□□ -1.15
XRCC4-205ENST00000511817 TRIM67Q6ZTA4 783 aa7.83□□□□□ -1.16
XRCC4-205ENST00000511817 LRCH3Q96II8 777 aa7.83□□□□□ -1.16
XRCC4-205ENST00000511817 NCKAP5LQ9HCH0 1330 aa7.82□□□□□ -1.16
XRCC4-205ENST00000511817 PHF14O94880 888 aa7.81□□□□□ -1.16
XRCC4-205ENST00000511817 TRIM6-TRIM34B2RNG4 842 aa7.81□□□□□ -1.16
XRCC4-205ENST00000511817 NFX1Q12986 1120 aaKnown RBP7.81□□□□□ -1.16
XRCC4-205ENST00000511817 IL21Q9HBE4 155 aa7.81□□□□□ -1.16
XRCC4-205ENST00000511817 FAM181BA6NEQ2 426 aa7.78□□□□□ -1.16
XRCC4-205ENST00000511817 PRR20EP86478 221 aa7.78□□□□□ -1.16
XRCC4-205ENST00000511817 PRR20CP86479 221 aa7.78□□□□□ -1.16
XRCC4-205ENST00000511817 PRR20DP86480 221 aa7.78□□□□□ -1.16
XRCC4-205ENST00000511817 PRR20BP86481 221 aa7.78□□□□□ -1.16
XRCC4-205ENST00000511817 PRR20AP86496 221 aa7.78□□□□□ -1.16
XRCC4-205ENST00000511817 PPP4CP60510 307 aa7.78□□□□□ -1.16
XRCC4-205ENST00000511817 C6orf132Q5T0Z8 1188 aa7.78□□□□□ -1.16
XRCC4-205ENST00000511817 RYDENQ9NUL5 291 aaKnown RBP7.78□□□□□ -1.16
XRCC4-205ENST00000511817 MTRQ99707 1265 aa7.77□□□□□ -1.17
XRCC4-205ENST00000511817 GGCXP38435 758 aa7.76□□□□□ -1.17
XRCC4-205ENST00000511817 DDX27Q96GQ7 796 aaKnown RBP7.76□□□□□ -1.17
XRCC4-205ENST00000511817 DNAJC5Q9H3Z4 198 aa7.76□□□□□ -1.17
XRCC4-205ENST00000511817 EPAS1Q99814 870 aa7.75□□□□□ -1.17
XRCC4-205ENST00000511817 EMILIN3Q9NT22 766 aa7.75□□□□□ -1.17
XRCC4-205ENST00000511817 LARP6Q9BRS8 491 aaKnown RBP7.74□□□□□ -1.17
XRCC4-205ENST00000511817 MFSD10Q14728 455 aa7.74□□□□□ -1.17
XRCC4-205ENST00000511817 AAASQ9NRG9 546 aa7.74□□□□□ -1.17
XRCC4-205ENST00000511817 FAM187AA6NFU0 413 aa7.73□□□□□ -1.17
XRCC4-205ENST00000511817 NKX1-1Q15270 411 aaPredicted RBP7.73□□□□□ -1.17
XRCC4-205ENST00000511817 TMUB1Q9BVT8 246 aa7.72□□□□□ -1.17
XRCC4-205ENST00000511817 ST8SIA5O15466 376 aa7.71□□□□□ -1.17
XRCC4-205ENST00000511817 CHGAP10645 457 aaKnown RBP7.7□□□□□ -1.18
XRCC4-205ENST00000511817 PACS2Q86VP3 889 aa7.7□□□□□ -1.18
XRCC4-205ENST00000511817 ZNF516Q92618 1163 aa7.69□□□□□ -1.18
XRCC4-205ENST00000511817 SAMD7Q7Z3H4 446 aa7.67□□□□□ -1.18
XRCC4-205ENST00000511817 TSKSQ9UJT2 592 aa7.67□□□□□ -1.18
XRCC4-205ENST00000511817 SLC19A1P41440 591 aa7.67□□□□□ -1.18
XRCC4-205ENST00000511817 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
XRCC4-205ENST00000511817 CRIPAKQ8N1N5 446 aa7.67□□□□□ -1.18
XRCC4-205ENST00000511817 ZNF598Q86UK7 904 aaKnown RBP7.66□□□□□ -1.18
XRCC4-205ENST00000511817 RBM33Q96EV2 1170 aaKnown RBP7.65□□□□□ -1.18
XRCC4-205ENST00000511817 SPRYD7Q5W111 196 aa7.64□□□□□ -1.19
XRCC4-205ENST00000511817 NKX2-3Q8TAU0 364 aa7.64□□□□□ -1.19
XRCC4-205ENST00000511817 C11orf95C9JLR9 678 aaPredicted RBP7.63□□□□□ -1.19
XRCC4-205ENST00000511817 EMID1Q96A84 441 aaPredicted RBP7.62□□□□□ -1.19
XRCC4-205ENST00000511817 GMPR2Q9P2T1 348 aaKnown RBP7.61□□□□□ -1.19
XRCC4-205ENST00000511817 SMAPO00193 183 aa7.6□□□□□ -1.19
XRCC4-205ENST00000511817 GDF9O60383 454 aa7.6□□□□□ -1.19
XRCC4-205ENST00000511817 APLP1P51693 650 aa7.6□□□□□ -1.19
XRCC4-205ENST00000511817 TERTO14746 1132 aaKnown RBP7.6□□□□□ -1.19
XRCC4-205ENST00000511817 EN1Q05925 392 aaPredicted RBP7.59□□□□□ -1.19
XRCC4-205ENST00000511817 ZNF697Q5TEC3 545 aa7.58□□□□□ -1.2
XRCC4-205ENST00000511817 CDCA7LQ96GN5 454 aa7.58□□□□□ -1.2
XRCC4-205ENST00000511817 FAM198AQ9UFP1 575 aa7.58□□□□□ -1.2
XRCC4-205ENST00000511817 GTPBP6O43824 516 aaPredicted RBP7.57□□□□□ -1.2
XRCC4-205ENST00000511817 CAMK2BQ13554 666 aa7.57□□□□□ -1.2
XRCC4-205ENST00000511817 TSR1Q2NL82 804 aaKnown RBP7.57□□□□□ -1.2
XRCC4-205ENST00000511817 DDX12PQ92771 950 aa7.57□□□□□ -1.2
XRCC4-205ENST00000511817 TATDN2Q93075 761 aa7.57□□□□□ -1.2
XRCC4-205ENST00000511817 DACH1Q9UI36 760 aa7.57□□□□□ -1.2
XRCC4-205ENST00000511817 TNFRSF10AO00220 468 aa7.56□□□□□ -1.2
XRCC4-205ENST00000511817 DPYSL4O14531 572 aa7.56□□□□□ -1.2
XRCC4-205ENST00000511817 PRSS12P56730 875 aa7.56□□□□□ -1.2
XRCC4-205ENST00000511817 ZSCAN1Q8NBB4 408 aa7.56□□□□□ -1.2
XRCC4-205ENST00000511817 NBPF26B4DH59 902 aa7.56□□□□□ -1.2
XRCC4-205ENST00000511817 MAP3K7O43318 606 aa7.56□□□□□ -1.2
XRCC4-205ENST00000511817 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
XRCC4-205ENST00000511817 NECTIN2Q92692 538 aa7.56□□□□□ -1.2
XRCC4-205ENST00000511817 C3orf80F5H4A9 247 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms