RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
RAB28-207ENST00000511649 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
RAB28-207ENST00000511649 TNIKQ9UKE5 1360 aa11.22□□□□□ -0.61
RAB28-207ENST00000511649 CTTNBP2Q8WZ74 1663 aa11.21□□□□□ -0.61
RAB28-207ENST00000511649 UHRF1BP1LA0JNW5 1464 aa11.21□□□□□ -0.61
RAB28-207ENST00000511649 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
RAB28-207ENST00000511649 ZCCHC11Q5TAX3 1644 aaKnown RBP11.2□□□□□ -0.62
RAB28-207ENST00000511649 ASXL2Q76L83 1435 aa11.2□□□□□ -0.62
RAB28-207ENST00000511649 TTBK1Q5TCY1 1321 aaPredicted RBP11.2□□□□□ -0.62
RAB28-207ENST00000511649 KDM6BO15054 1643 aa11.2□□□□□ -0.62
RAB28-207ENST00000511649 KDM5BQ9UGL1 1544 aa11.19□□□□□ -0.62
RAB28-207ENST00000511649 COL17A1Q9UMD9 1497 aaPredicted RBP11.19□□□□□ -0.62
RAB28-207ENST00000511649 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
RAB28-207ENST00000511649 GLI2P10070 1586 aa11.18□□□□□ -0.62
RAB28-207ENST00000511649 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
RAB28-207ENST00000511649 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
RAB28-207ENST00000511649 CARMIL2Q6F5E8 1435 aa11.17□□□□□ -0.62
RAB28-207ENST00000511649 MAP3K4Q9Y6R4 1608 aa11.17□□□□□ -0.62
RAB28-207ENST00000511649 EPRSP07814 1512 aaKnown RBP11.16□□□□□ -0.62
RAB28-207ENST00000511649 PPP1R37O75864 691 aa11.16□□□□□ -0.62
RAB28-207ENST00000511649 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
RAB28-207ENST00000511649 PLB1Q6P1J6 1458 aa11.16□□□□□ -0.62
RAB28-207ENST00000511649 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
RAB28-207ENST00000511649 ABCA8O94911 1581 aa11.15□□□□□ -0.62
RAB28-207ENST00000511649 PAXIP1Q6ZW49 1069 aaPredicted RBP11.14□□□□□ -0.63
RAB28-207ENST00000511649 G3V3G9 751 aa11.13□□□□□ -0.63
RAB28-207ENST00000511649 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
RAB28-207ENST00000511649 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
RAB28-207ENST00000511649 CFAP44Q96MT7 982 aa11.12□□□□□ -0.63
RAB28-207ENST00000511649 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
RAB28-207ENST00000511649 SAMD9Q5K651 1589 aa11.08□□□□□ -0.64
RAB28-207ENST00000511649 WDR7Q9Y4E6 1490 aa11.08□□□□□ -0.64
RAB28-207ENST00000511649 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
RAB28-207ENST00000511649 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
RAB28-207ENST00000511649 PLCB2Q00722 1185 aa11.05□□□□□ -0.64
RAB28-207ENST00000511649 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.05□□□□□ -0.64
RAB28-207ENST00000511649 SLAIN1Q8ND83 568 aa11.03□□□□□ -0.64
RAB28-207ENST00000511649 ADGRL1O94910 1474 aa11.03□□□□□ -0.64
RAB28-207ENST00000511649 GOLGA3Q08378 1498 aa11.03□□□□□ -0.64
RAB28-207ENST00000511649 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
RAB28-207ENST00000511649 ATP10BO94823 1461 aa11.01□□□□□ -0.65
RAB28-207ENST00000511649 MAGI3Q5TCQ9 1506 aa11□□□□□ -0.65
RAB28-207ENST00000511649 RAPGEF6Q8TEU7 1601 aa10.99□□□□□ -0.65
RAB28-207ENST00000511649 ARID3CA6NKF2 412 aa10.99□□□□□ -0.65
RAB28-207ENST00000511649 TMEM92Q6UXU6 159 aa10.99□□□□□ -0.65
RAB28-207ENST00000511649 P3H3Q8IVL6 736 aa10.99□□□□□ -0.65
RAB28-207ENST00000511649 NUP153P49790 1475 aaKnown RBP10.99□□□□□ -0.65
RAB28-207ENST00000511649 TEX14Q8IWB6 1497 aa10.99□□□□□ -0.65
RAB28-207ENST00000511649 FHOD3Q2V2M9 1422 aa10.98□□□□□ -0.65
RAB28-207ENST00000511649 FRMPD1Q5SYB0 1578 aa10.98□□□□□ -0.65
RAB28-207ENST00000511649 ABCA9Q8IUA7 1624 aa10.98□□□□□ -0.65
RAB28-207ENST00000511649 CD109Q6YHK3 1445 aa10.97□□□□□ -0.65
RAB28-207ENST00000511649 KIF21BO75037 1637 aa10.97□□□□□ -0.65
RAB28-207ENST00000511649 CADPS2Q86UW7 1296 aa10.95□□□□□ -0.66
RAB28-207ENST00000511649 KIF3CO14782 793 aa10.94□□□□□ -0.66
RAB28-207ENST00000511649 KCNH8Q96L42 1107 aa10.94□□□□□ -0.66
RAB28-207ENST00000511649 SIGLEC1Q9BZZ2 1709 aa10.92□□□□□ -0.66
RAB28-207ENST00000511649 C2orf72A6NCS6 295 aa10.92□□□□□ -0.66
RAB28-207ENST00000511649 CRISPLD2Q9H0B8 497 aa10.92□□□□□ -0.66
RAB28-207ENST00000511649 ARAP3Q8WWN8 1544 aa10.92□□□□□ -0.66
RAB28-207ENST00000511649 TTC37Q6PGP7 1564 aa10.91□□□□□ -0.66
RAB28-207ENST00000511649 NCKAP5LQ9HCH0 1330 aa10.91□□□□□ -0.66
RAB28-207ENST00000511649 TMC2Q8TDI7 906 aa10.91□□□□□ -0.66
RAB28-207ENST00000511649 TSHZ2Q9NRE2 1034 aa10.91□□□□□ -0.66
RAB28-207ENST00000511649 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.66
RAB28-207ENST00000511649 FAM9AQ8IZU1 332 aaPredicted RBP10.9□□□□□ -0.66
RAB28-207ENST00000511649 GPHNQ9NQX3 736 aaPredicted RBP10.9□□□□□ -0.66
RAB28-207ENST00000511649 EEA1Q15075 1411 aa10.9□□□□□ -0.66
RAB28-207ENST00000511649 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
RAB28-207ENST00000511649 LRRIQ1Q96JM4 1722 aa10.89□□□□□ -0.67
RAB28-207ENST00000511649 PDE4AP27815 886 aa10.88□□□□□ -0.67
RAB28-207ENST00000511649 RANGAP1P46060 587 aaPredicted RBP10.88□□□□□ -0.67
RAB28-207ENST00000511649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.88□□□□□ -0.67
RAB28-207ENST00000511649 RICTORQ6R327 1708 aa10.87□□□□□ -0.67
RAB28-207ENST00000511649 HAP1P54257 671 aaPredicted RBP10.87□□□□□ -0.67
RAB28-207ENST00000511649 ADAMTSL3P82987 1691 aa10.87□□□□□ -0.67
RAB28-207ENST00000511649 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
RAB28-207ENST00000511649 FOXK1P85037 733 aa10.85□□□□□ -0.67
RAB28-207ENST00000511649 NEO1Q92859 1461 aa10.85□□□□□ -0.67
RAB28-207ENST00000511649 ARHGAP35Q9NRY4 1499 aa10.85□□□□□ -0.67
RAB28-207ENST00000511649 ARHGEF40Q8TER5 1519 aa10.84□□□□□ -0.67
RAB28-207ENST00000511649 RAPGEF3O95398 923 aa10.84□□□□□ -0.67
RAB28-207ENST00000511649 MMRN1Q13201 1228 aa10.84□□□□□ -0.67
RAB28-207ENST00000511649 DSG2Q14126 1118 aa10.84□□□□□ -0.67
RAB28-207ENST00000511649 MFSD10Q14728 455 aa10.84□□□□□ -0.67
RAB28-207ENST00000511649 LARP6Q9BRS8 491 aaKnown RBP10.84□□□□□ -0.67
RAB28-207ENST00000511649 ST18O60284 1047 aa10.83□□□□□ -0.68
RAB28-207ENST00000511649 BCORL1Q5H9F3 1711 aa10.83□□□□□ -0.68
RAB28-207ENST00000511649 KIF14Q15058 1648 aa10.83□□□□□ -0.68
RAB28-207ENST00000511649 MADDQ8WXG6 1647 aa10.83□□□□□ -0.68
RAB28-207ENST00000511649 PPP1R15BQ5SWA1 713 aa10.82□□□□□ -0.68
RAB28-207ENST00000511649 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
RAB28-207ENST00000511649 SNPHO15079 494 aa10.8□□□□□ -0.68
RAB28-207ENST00000511649 SPNS2Q8IVW8 549 aa10.8□□□□□ -0.68
RAB28-207ENST00000511649 PLPP6Q8IY26 295 aa10.8□□□□□ -0.68
RAB28-207ENST00000511649 ZMYM4Q5VZL5 1548 aa10.79□□□□□ -0.68
RAB28-207ENST00000511649 YEATS2Q9ULM3 1422 aa10.79□□□□□ -0.68
RAB28-207ENST00000511649 HOXB3P14651 431 aaPredicted RBP10.79□□□□□ -0.68
RAB28-207ENST00000511649 FANCAO15360 1455 aa10.79□□□□□ -0.68
RAB28-207ENST00000511649 PTPRMP28827 1452 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms