RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 HRO43593 1189 aa9.05□□□□□ -0.96
PTPN13-208ENST00000511105 PTPREP23469 700 aa9.05□□□□□ -0.96
PTPN13-208ENST00000511105 WDR70Q9NW82 654 aa9.05□□□□□ -0.96
PTPN13-208ENST00000511105 VPS9D1Q9Y2B5 631 aa9.05□□□□□ -0.96
PTPN13-208ENST00000511105 ZCCHC6Q5VYS8 1495 aaKnown RBP9.04□□□□□ -0.96
PTPN13-208ENST00000511105 COL9A1P20849 921 aa9.04□□□□□ -0.96
PTPN13-208ENST00000511105 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
PTPN13-208ENST00000511105 E2F4Q16254 413 aa9.03□□□□□ -0.96
PTPN13-208ENST00000511105 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
PTPN13-208ENST00000511105 STAC3Q96MF2 364 aa9.03□□□□□ -0.96
PTPN13-208ENST00000511105 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
PTPN13-208ENST00000511105 KCNH8Q96L42 1107 aa9.02□□□□□ -0.97
PTPN13-208ENST00000511105 TK2O00142 265 aa9.01□□□□□ -0.97
PTPN13-208ENST00000511105 UNC13AQ9UPW8 1703 aa9□□□□□ -0.97
PTPN13-208ENST00000511105 TYW1BQ6NUM6 668 aa9□□□□□ -0.97
PTPN13-208ENST00000511105 ZBED2Q9BTP6 218 aa9□□□□□ -0.97
PTPN13-208ENST00000511105 GRXCR2A6NFK2 248 aa8.99□□□□□ -0.97
PTPN13-208ENST00000511105 PHF14O94880 888 aa8.99□□□□□ -0.97
PTPN13-208ENST00000511105 SCRIBQ14160 1630 aa8.98□□□□□ -0.97
PTPN13-208ENST00000511105 PRIM1P49642 420 aaKnown RBP8.98□□□□□ -0.97
PTPN13-208ENST00000511105 BICRAQ9NZM4 1560 aa8.98□□□□□ -0.97
PTPN13-208ENST00000511105 PTPN5P54829 565 aa8.97□□□□□ -0.97
PTPN13-208ENST00000511105 TSR1Q2NL82 804 aaKnown RBP8.97□□□□□ -0.97
PTPN13-208ENST00000511105 C6orf132Q5T0Z8 1188 aa8.97□□□□□ -0.97
PTPN13-208ENST00000511105 ERICH6Q7L0X2 663 aa8.97□□□□□ -0.97
PTPN13-208ENST00000511105 P3H3Q8IVL6 736 aa8.97□□□□□ -0.97
PTPN13-208ENST00000511105 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.98
PTPN13-208ENST00000511105 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
PTPN13-208ENST00000511105 BHMG1C9JSJ3 638 aaPredicted RBP8.95□□□□□ -0.98
PTPN13-208ENST00000511105 GTF3C3Q9Y5Q9 886 aa8.95□□□□□ -0.98
PTPN13-208ENST00000511105 PDIA6Q15084 440 aa8.94□□□□□ -0.98
PTPN13-208ENST00000511105 TMEM132AQ24JP5 1023 aa8.94□□□□□ -0.98
PTPN13-208ENST00000511105 MYO15BQ96JP2 1530 aa8.94□□□□□ -0.98
PTPN13-208ENST00000511105 MAP3K7O43318 606 aa8.93□□□□□ -0.98
PTPN13-208ENST00000511105 FBXW7Q969H0 707 aa8.93□□□□□ -0.98
PTPN13-208ENST00000511105 KIAA1468Q9P260 1216 aa8.93□□□□□ -0.98
PTPN13-208ENST00000511105 GOLGA8CPA6NN73 597 aa8.92□□□□□ -0.98
PTPN13-208ENST00000511105 PPP1R3GB7ZBB8 358 aa8.92□□□□□ -0.98
PTPN13-208ENST00000511105 MRPL50Q8N5N7 158 aaKnown RBP8.92□□□□□ -0.98
PTPN13-208ENST00000511105 EPAS1Q99814 870 aa8.92□□□□□ -0.98
PTPN13-208ENST00000511105 SLC4A5Q9BY07 1137 aa8.92□□□□□ -0.98
PTPN13-208ENST00000511105 HCSTQ9UBK5 93 aa8.91□□□□□ -0.98
PTPN13-208ENST00000511105 SEPT9Q9UHD8 586 aaPredicted RBP8.91□□□□□ -0.98
PTPN13-208ENST00000511105 WNT2BQ93097 391 aa8.9□□□□□ -0.98
PTPN13-208ENST00000511105 DCAF1Q9Y4B6 1507 aa8.9□□□□□ -0.99
PTPN13-208ENST00000511105 SPDYE16A6NNV3 312 aaPredicted RBP8.89□□□□□ -0.99
PTPN13-208ENST00000511105 EN1Q05925 392 aaPredicted RBP8.89□□□□□ -0.99
PTPN13-208ENST00000511105 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
PTPN13-208ENST00000511105 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
PTPN13-208ENST00000511105 CDHR5Q9HBB8 845 aa8.88□□□□□ -0.99
PTPN13-208ENST00000511105 SMAPO00193 183 aa8.87□□□□□ -0.99
PTPN13-208ENST00000511105 OSBPP22059 807 aa8.87□□□□□ -0.99
PTPN13-208ENST00000511105 MLLT3P42568 568 aaPredicted RBP8.87□□□□□ -0.99
PTPN13-208ENST00000511105 C3orf80F5H4A9 247 aa8.86□□□□□ -0.99
PTPN13-208ENST00000511105 RABGEF1Q9UJ41 708 aa8.86□□□□□ -0.99
PTPN13-208ENST00000511105 BCAMP50895 628 aa8.85□□□□□ -0.99
PTPN13-208ENST00000511105 THSD4Q6ZMP0 1018 aa8.85□□□□□ -0.99
PTPN13-208ENST00000511105 ARXQ96QS3 562 aa8.85□□□□□ -0.99
PTPN13-208ENST00000511105 TSKSQ9UJT2 592 aa8.85□□□□□ -0.99
PTPN13-208ENST00000511105 TRIM6-TRIM34B2RNG4 842 aa8.84□□□□□ -0.99
PTPN13-208ENST00000511105 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
PTPN13-208ENST00000511105 FAM198AQ9UFP1 575 aa8.84□□□□□ -0.99
PTPN13-208ENST00000511105 ARIH1Q9Y4X5 557 aaPredicted RBP8.84□□□□□ -0.99
PTPN13-208ENST00000511105 CDCA7LQ96GN5 454 aa8.82□□□□□ -1
PTPN13-208ENST00000511105 LMOD2Q6P5Q4 547 aa8.81□□□□□ -1
PTPN13-208ENST00000511105 ZFRQ96KR1 1074 aaKnown RBP8.81□□□□□ -1
PTPN13-208ENST00000511105 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.79□□□□□ -1
PTPN13-208ENST00000511105 ARHGEF1Q92888 912 aaKnown RBP8.79□□□□□ -1
PTPN13-208ENST00000511105 SEMA3EO15041 775 aa8.78□□□□□ -1
PTPN13-208ENST00000511105 PRSS12P56730 875 aa8.78□□□□□ -1
PTPN13-208ENST00000511105 ANKK1Q8NFD2 765 aa8.78□□□□□ -1
PTPN13-208ENST00000511105 CECR2Q9BXF3 1484 aa8.77□□□□□ -1
PTPN13-208ENST00000511105 CC2D2AQ9P2K1 1620 aa8.77□□□□□ -1.01
PTPN13-208ENST00000511105 PACS2Q86VP3 889 aa8.77□□□□□ -1.01
PTPN13-208ENST00000511105 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
PTPN13-208ENST00000511105 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
PTPN13-208ENST00000511105 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
PTPN13-208ENST00000511105 ONECUT3O60422 494 aaPredicted RBP8.75□□□□□ -1.01
PTPN13-208ENST00000511105 NUDT18Q6ZVK8 323 aa8.75□□□□□ -1.01
PTPN13-208ENST00000511105 EIF4G1Q04637 1599 aaKnown RBP8.74□□□□□ -1.01
PTPN13-208ENST00000511105 SOWAHBA6NEL2 793 aa8.74□□□□□ -1.01
PTPN13-208ENST00000511105 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
PTPN13-208ENST00000511105 PADI6Q6TGC4 694 aa8.74□□□□□ -1.01
PTPN13-208ENST00000511105 LAPTM4BQ86VI4 370 aa8.74□□□□□ -1.01
PTPN13-208ENST00000511105 TATDN2Q93075 761 aa8.74□□□□□ -1.01
PTPN13-208ENST00000511105 FAM161AQ3B820 660 aa8.73□□□□□ -1.01
PTPN13-208ENST00000511105 SAMD7Q7Z3H4 446 aa8.73□□□□□ -1.01
PTPN13-208ENST00000511105 BRPF1P55201 1214 aaPredicted RBP8.72□□□□□ -1.01
PTPN13-208ENST00000511105 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.72□□□□□ -1.01
PTPN13-208ENST00000511105 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
PTPN13-208ENST00000511105 NUTM2FA1L443 756 aa8.71□□□□□ -1.02
PTPN13-208ENST00000511105 C14orf37Q86TY3 774 aa8.71□□□□□ -1.02
PTPN13-208ENST00000511105 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
PTPN13-208ENST00000511105 RNF40O75150 1001 aa8.69□□□□□ -1.02
PTPN13-208ENST00000511105 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
PTPN13-208ENST00000511105 RBM26Q5T8P6 1007 aaKnown RBP8.68□□□□□ -1.02
PTPN13-208ENST00000511105 DAXXQ9UER7 740 aaPredicted RBP8.68□□□□□ -1.02
PTPN13-208ENST00000511105 RGS20O76081 388 aa8.67□□□□□ -1.02
PTPN13-208ENST00000511105 PPP4CP60510 307 aa8.67□□□□□ -1.02
PTPN13-208ENST00000511105 TSR3Q9UJK0 312 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms