RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 APAF1O14727 1248 aa18.03■□□□□ 0.48
PRDM16-206ENST00000511072 FGD1P98174 961 aa18.03■□□□□ 0.48
PRDM16-206ENST00000511072 HSCBQ8IWL3 235 aa18.03■□□□□ 0.48
PRDM16-206ENST00000511072 TERF2IPQ9NYB0 399 aa18.03■□□□□ 0.48
PRDM16-206ENST00000511072 NFKBIBQ15653 356 aa18.03■□□□□ 0.48
PRDM16-206ENST00000511072 NAP1L2Q9ULW6 460 aaPredicted RBP18.02■□□□□ 0.48
PRDM16-206ENST00000511072 KIF15Q9NS87 1388 aa18.02■□□□□ 0.47
PRDM16-206ENST00000511072 PDE4AP27815 886 aa18.01■□□□□ 0.47
PRDM16-206ENST00000511072 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
PRDM16-206ENST00000511072 LTV1Q96GA3 475 aaPredicted RBP18.01■□□□□ 0.47
PRDM16-206ENST00000511072 GZF1Q9H116 711 aaPredicted RBP18.01■□□□□ 0.47
PRDM16-206ENST00000511072 RWDD1Q9H446 243 aaPredicted RBP18.01■□□□□ 0.47
PRDM16-206ENST00000511072 CENPJQ9HC77 1338 aaPredicted RBP18■□□□□ 0.47
PRDM16-206ENST00000511072 PDE3BQ13370 1112 aa18■□□□□ 0.47
PRDM16-206ENST00000511072 EIF3AQ14152 1382 aaKnown RBP17.98■□□□□ 0.47
PRDM16-206ENST00000511072 MFAP1P55081 439 aaKnown RBP17.98■□□□□ 0.47
PRDM16-206ENST00000511072 SLC4A10Q6U841 1118 aa17.98■□□□□ 0.47
PRDM16-206ENST00000511072 ZNF330Q9Y3S2 320 aaPredicted RBP17.98■□□□□ 0.47
PRDM16-206ENST00000511072 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
PRDM16-206ENST00000511072 MINK1Q8N4C8 1332 aaPredicted RBP17.98■□□□□ 0.47
PRDM16-206ENST00000511072 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
PRDM16-206ENST00000511072 NGDNQ8NEJ9 315 aaKnown RBP17.97■□□□□ 0.47
PRDM16-206ENST00000511072 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
PRDM16-206ENST00000511072 MYOM3Q5VTT5 1437 aa17.97■□□□□ 0.47
PRDM16-206ENST00000511072 ZBED9Q6R2W3 1325 aa17.97■□□□□ 0.47
PRDM16-206ENST00000511072 AFAP1Q8N556 730 aa17.96■□□□□ 0.47
PRDM16-206ENST00000511072 DNTTIP2Q5QJE6 756 aaKnown RBP17.96■□□□□ 0.47
PRDM16-206ENST00000511072 COG6Q9Y2V7 657 aa17.95■□□□□ 0.46
PRDM16-206ENST00000511072 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
PRDM16-206ENST00000511072 CRBNQ96SW2 442 aa17.94■□□□□ 0.46
PRDM16-206ENST00000511072 ZRSR1Q15695 479 aaKnown RBP17.94■□□□□ 0.46
PRDM16-206ENST00000511072 C11orf95C9JLR9 678 aaPredicted RBP17.93■□□□□ 0.46
PRDM16-206ENST00000511072 FAM43AQ8N2R8 423 aa17.93■□□□□ 0.46
PRDM16-206ENST00000511072 CCDC7Q96M83 1385 aa17.93■□□□□ 0.46
PRDM16-206ENST00000511072 NPHP1O15259 732 aa17.92■□□□□ 0.46
PRDM16-206ENST00000511072 CSB-PGBD3P0DP91 1061 aa17.92■□□□□ 0.46
PRDM16-206ENST00000511072 SYNJ1O43426 1573 aa17.92■□□□□ 0.46
PRDM16-206ENST00000511072 UACAQ9BZF9 1416 aa17.92■□□□□ 0.46
PRDM16-206ENST00000511072 RRP1P56182 461 aaKnown RBP17.92■□□□□ 0.46
PRDM16-206ENST00000511072 NESP48681 1621 aa17.91■□□□□ 0.46
PRDM16-206ENST00000511072 TMEM132EQ6IEE7 984 aa17.91■□□□□ 0.46
PRDM16-206ENST00000511072 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
PRDM16-206ENST00000511072 AMPHP49418 695 aa17.9■□□□□ 0.46
PRDM16-206ENST00000511072 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
PRDM16-206ENST00000511072 VGFO15240 615 aaPredicted RBP17.9■□□□□ 0.46
PRDM16-206ENST00000511072 ARID3AQ99856 593 aa17.9■□□□□ 0.46
PRDM16-206ENST00000511072 STK31Q9BXU1 1019 aa17.89■□□□□ 0.45
PRDM16-206ENST00000511072 NCOA2Q15596 1464 aa17.89■□□□□ 0.45
PRDM16-206ENST00000511072 NBPF1Q3BBV0 1214 aa17.89■□□□□ 0.45
PRDM16-206ENST00000511072 NBPF8Q3BBV2 869 aa17.89■□□□□ 0.45
PRDM16-206ENST00000511072 PMFBP1Q8TBY8 1022 aa17.89■□□□□ 0.45
PRDM16-206ENST00000511072 FRAT2O75474 233 aaPredicted RBP17.88■□□□□ 0.45
PRDM16-206ENST00000511072 ANKRD50Q9ULJ7 1429 aa17.88■□□□□ 0.45
PRDM16-206ENST00000511072 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
PRDM16-206ENST00000511072 CFTRP13569 1480 aa17.87■□□□□ 0.45
PRDM16-206ENST00000511072 AKNAQ7Z591 1439 aa17.86■□□□□ 0.45
PRDM16-206ENST00000511072 EID1Q9Y6B2 187 aa17.86■□□□□ 0.45
PRDM16-206ENST00000511072 CGNL1Q0VF96 1302 aa17.85■□□□□ 0.45
PRDM16-206ENST00000511072 CDCA7LQ96GN5 454 aa17.85■□□□□ 0.45
PRDM16-206ENST00000511072 NOL8Q76FK4 1167 aaKnown RBP17.85■□□□□ 0.45
PRDM16-206ENST00000511072 GOLGA6L4A6NEF3 574 aa17.84■□□□□ 0.45
PRDM16-206ENST00000511072 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
PRDM16-206ENST00000511072 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
PRDM16-206ENST00000511072 TULP1O00294 542 aaPredicted RBP17.84■□□□□ 0.45
PRDM16-206ENST00000511072 CASKIN1Q8WXD9 1431 aa17.83■□□□□ 0.45
PRDM16-206ENST00000511072 TRIM6-TRIM34B2RNG4 842 aa17.83■□□□□ 0.45
PRDM16-206ENST00000511072 EVC2Q86UK5 1308 aa17.83■□□□□ 0.44
PRDM16-206ENST00000511072 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
PRDM16-206ENST00000511072 MCCP23508 829 aa17.83■□□□□ 0.44
PRDM16-206ENST00000511072 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
PRDM16-206ENST00000511072 E9PSI1 815 aa17.82■□□□□ 0.44
PRDM16-206ENST00000511072 KIAA1211Q6ZU35 1233 aa17.82■□□□□ 0.44
PRDM16-206ENST00000511072 GGNBP2Q9H3C7 697 aa17.82■□□□□ 0.44
PRDM16-206ENST00000511072 ADAMTS8Q9UP79 889 aa17.82■□□□□ 0.44
PRDM16-206ENST00000511072 L1TD1Q5T7N2 865 aaKnown RBP17.81■□□□□ 0.44
PRDM16-206ENST00000511072 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
PRDM16-206ENST00000511072 SKAP1Q86WV1 359 aa17.79■□□□□ 0.44
PRDM16-206ENST00000511072 ANKRD45Q5TZF3 282 aa17.79■□□□□ 0.44
PRDM16-206ENST00000511072 CHMP3Q9Y3E7 222 aa17.79■□□□□ 0.44
PRDM16-206ENST00000511072 CENPQQ7L2Z9 268 aaPredicted RBP17.78■□□□□ 0.44
PRDM16-206ENST00000511072 COG3Q96JB2 828 aa17.78■□□□□ 0.44
PRDM16-206ENST00000511072 ZKSCAN2Q63HK3 967 aa17.78■□□□□ 0.44
PRDM16-206ENST00000511072 NECTIN2Q92692 538 aa17.78■□□□□ 0.44
PRDM16-206ENST00000511072 CABP2Q9NPB3 220 aa17.77■□□□□ 0.44
PRDM16-206ENST00000511072 HMOX1P09601 288 aa17.77■□□□□ 0.43
PRDM16-206ENST00000511072 BACH2Q9BYV9 841 aa17.77■□□□□ 0.43
PRDM16-206ENST00000511072 RIPK4P57078 832 aa17.76■□□□□ 0.43
PRDM16-206ENST00000511072 FOXD4L5Q5VV16 416 aaPredicted RBP17.76■□□□□ 0.43
PRDM16-206ENST00000511072 FOXD4L4Q8WXT5 416 aaPredicted RBP17.76■□□□□ 0.43
PRDM16-206ENST00000511072 HMMRO75330 724 aa17.75■□□□□ 0.43
PRDM16-206ENST00000511072 FAM69CQ0P6D2 419 aa17.75■□□□□ 0.43
PRDM16-206ENST00000511072 FAM161AQ3B820 660 aa17.75■□□□□ 0.43
PRDM16-206ENST00000511072 CNTLNQ9NXG0 1405 aa17.75■□□□□ 0.43
PRDM16-206ENST00000511072 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
PRDM16-206ENST00000511072 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
PRDM16-206ENST00000511072 LMOD3Q0VAK6 560 aa17.74■□□□□ 0.43
PRDM16-206ENST00000511072 RRP9O43818 475 aaKnown RBP17.74■□□□□ 0.43
PRDM16-206ENST00000511072 PANK1Q8TE04 598 aa17.74■□□□□ 0.43
PRDM16-206ENST00000511072 GBP4Q96PP9 640 aa17.74■□□□□ 0.43
PRDM16-206ENST00000511072 MTHFSP49914 203 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms