RNA–Protein interactions for RNA: ENST00000511033.1

SEC24D-210, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 4

Gene SEC24D, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-210ENST00000511033 VPS9D1Q9Y2B5 631 aa8.85□□□□□ -0.99
SEC24D-210ENST00000511033 HMGXB3Q12766 1538 aa8.85□□□□□ -0.99
SEC24D-210ENST00000511033 SPRYD3Q8NCJ5 442 aa8.83□□□□□ -1
SEC24D-210ENST00000511033 PCDHGA10Q9Y5H3 936 aa8.83□□□□□ -1
SEC24D-210ENST00000511033 TOP2AP11388 1531 aaKnown RBP8.83□□□□□ -1
SEC24D-210ENST00000511033 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
SEC24D-210ENST00000511033 SLC4A5Q9BY07 1137 aa8.82□□□□□ -1
SEC24D-210ENST00000511033 BAZ1BQ9UIG0 1483 aaKnown RBP8.82□□□□□ -1
SEC24D-210ENST00000511033 BHMG1C9JSJ3 638 aaPredicted RBP8.81□□□□□ -1
SEC24D-210ENST00000511033 ZBED2Q9BTP6 218 aa8.81□□□□□ -1
SEC24D-210ENST00000511033 ATAD2BQ9ULI0 1458 aa8.81□□□□□ -1
SEC24D-210ENST00000511033 SUPT5HO00267 1087 aaKnown RBP8.8□□□□□ -1
SEC24D-210ENST00000511033 DPYSL4O14531 572 aa8.8□□□□□ -1
SEC24D-210ENST00000511033 PTPREP23469 700 aa8.79□□□□□ -1
SEC24D-210ENST00000511033 PAXIP1Q6ZW49 1069 aaPredicted RBP8.78□□□□□ -1
SEC24D-210ENST00000511033 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.77□□□□□ -1.01
SEC24D-210ENST00000511033 NCAPD3P42695 1498 aa8.77□□□□□ -1.01
SEC24D-210ENST00000511033 PHF14O94880 888 aa8.76□□□□□ -1.01
SEC24D-210ENST00000511033 COL9A1P20849 921 aa8.76□□□□□ -1.01
SEC24D-210ENST00000511033 CFAP44Q96MT7 982 aa8.76□□□□□ -1.01
SEC24D-210ENST00000511033 KCNH8Q96L42 1107 aa8.75□□□□□ -1.01
SEC24D-210ENST00000511033 HCSTQ9UBK5 93 aa8.75□□□□□ -1.01
SEC24D-210ENST00000511033 KCTD12Q96CX2 325 aaKnown RBP8.74□□□□□ -1.01
SEC24D-210ENST00000511033 TYW1BQ6NUM6 668 aa8.73□□□□□ -1.01
SEC24D-210ENST00000511033 PPP1R3GB7ZBB8 358 aa8.72□□□□□ -1.01
SEC24D-210ENST00000511033 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
SEC24D-210ENST00000511033 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
SEC24D-210ENST00000511033 PDIA6Q15084 440 aa8.7□□□□□ -1.02
SEC24D-210ENST00000511033 C6orf132Q5T0Z8 1188 aa8.7□□□□□ -1.02
SEC24D-210ENST00000511033 DDX12PQ92771 950 aa8.7□□□□□ -1.02
SEC24D-210ENST00000511033 PRDM2Q13029 1718 aa8.7□□□□□ -1.02
SEC24D-210ENST00000511033 EPAS1Q99814 870 aa8.69□□□□□ -1.02
SEC24D-210ENST00000511033 ARIH1Q9Y4X5 557 aaPredicted RBP8.69□□□□□ -1.02
SEC24D-210ENST00000511033 PRIM1P49642 420 aaKnown RBP8.68□□□□□ -1.02
SEC24D-210ENST00000511033 E2F4Q16254 413 aa8.68□□□□□ -1.02
SEC24D-210ENST00000511033 THSD4Q6ZMP0 1018 aa8.67□□□□□ -1.02
SEC24D-210ENST00000511033 STAC3Q96MF2 364 aa8.67□□□□□ -1.02
SEC24D-210ENST00000511033 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
SEC24D-210ENST00000511033 RABGEF1Q9UJ41 708 aa8.67□□□□□ -1.02
SEC24D-210ENST00000511033 MRPL50Q8N5N7 158 aaKnown RBP8.66□□□□□ -1.02
SEC24D-210ENST00000511033 RBM33Q96EV2 1170 aaKnown RBP8.66□□□□□ -1.02
SEC24D-210ENST00000511033 PTPN5P54829 565 aa8.65□□□□□ -1.02
SEC24D-210ENST00000511033 TSHZ2Q9NRE2 1034 aa8.65□□□□□ -1.02
SEC24D-210ENST00000511033 SPDYE16A6NNV3 312 aaPredicted RBP8.64□□□□□ -1.03
SEC24D-210ENST00000511033 TSR1Q2NL82 804 aaKnown RBP8.64□□□□□ -1.03
SEC24D-210ENST00000511033 KIAA1468Q9P260 1216 aa8.64□□□□□ -1.03
SEC24D-210ENST00000511033 EN1Q05925 392 aaPredicted RBP8.63□□□□□ -1.03
SEC24D-210ENST00000511033 WNT2BQ93097 391 aa8.63□□□□□ -1.03
SEC24D-210ENST00000511033 NBPF3Q9H094 633 aa8.63□□□□□ -1.03
SEC24D-210ENST00000511033 CCDC88BA6NC98 1476 aa8.63□□□□□ -1.03
SEC24D-210ENST00000511033 ONECUT3O60422 494 aaPredicted RBP8.62□□□□□ -1.03
SEC24D-210ENST00000511033 NBR1Q14596 966 aa8.62□□□□□ -1.03
SEC24D-210ENST00000511033 WDR70Q9NW82 654 aa8.61□□□□□ -1.03
SEC24D-210ENST00000511033 TRIM6-TRIM34B2RNG4 842 aa8.6□□□□□ -1.03
SEC24D-210ENST00000511033 TSKSQ9UJT2 592 aa8.6□□□□□ -1.03
SEC24D-210ENST00000511033 LAMC3Q9Y6N6 1575 aa8.6□□□□□ -1.03
SEC24D-210ENST00000511033 OSBPP22059 807 aa8.59□□□□□ -1.03
SEC24D-210ENST00000511033 FAM198AQ9UFP1 575 aa8.59□□□□□ -1.03
SEC24D-210ENST00000511033 GRXCR2A6NFK2 248 aa8.58□□□□□ -1.04
SEC24D-210ENST00000511033 GOLGA8CPA6NN73 597 aa8.58□□□□□ -1.04
SEC24D-210ENST00000511033 C3orf80F5H4A9 247 aa8.58□□□□□ -1.04
SEC24D-210ENST00000511033 LAPTM4BQ86VI4 370 aa8.58□□□□□ -1.04
SEC24D-210ENST00000511033 SEPT9Q9UHD8 586 aaPredicted RBP8.58□□□□□ -1.04
SEC24D-210ENST00000511033 MAP3K7O43318 606 aa8.57□□□□□ -1.04
SEC24D-210ENST00000511033 BCAMP50895 628 aa8.57□□□□□ -1.04
SEC24D-210ENST00000511033 ZFRQ96KR1 1074 aaKnown RBP8.57□□□□□ -1.04
SEC24D-210ENST00000511033 SOWAHBA6NEL2 793 aa8.55□□□□□ -1.04
SEC24D-210ENST00000511033 CFTRP13569 1480 aa8.54□□□□□ -1.04
SEC24D-210ENST00000511033 ANKK1Q8NFD2 765 aa8.54□□□□□ -1.04
SEC24D-210ENST00000511033 CDHR5Q9HBB8 845 aa8.54□□□□□ -1.04
SEC24D-210ENST00000511033 PRSS12P56730 875 aa8.53□□□□□ -1.04
SEC24D-210ENST00000511033 FAM98CQ17RN3 349 aaKnown RBP8.53□□□□□ -1.04
SEC24D-210ENST00000511033 IFFO2Q5TF58 517 aa8.53□□□□□ -1.04
SEC24D-210ENST00000511033 CDCA7LQ96GN5 454 aa8.53□□□□□ -1.04
SEC24D-210ENST00000511033 CADPSQ9ULU8 1353 aa8.52□□□□□ -1.05
SEC24D-210ENST00000511033 KCNV2Q8TDN2 545 aa8.52□□□□□ -1.05
SEC24D-210ENST00000511033 NPDC1Q9NQX5 325 aaPredicted RBP8.52□□□□□ -1.05
SEC24D-210ENST00000511033 WBP1LQ9NX94 342 aa8.51□□□□□ -1.05
SEC24D-210ENST00000511033 SMAPO00193 183 aa8.5□□□□□ -1.05
SEC24D-210ENST00000511033 MLLT3P42568 568 aaPredicted RBP8.5□□□□□ -1.05
SEC24D-210ENST00000511033 PDS5BQ9NTI5 1447 aa8.49□□□□□ -1.05
SEC24D-210ENST00000511033 PACS2Q86VP3 889 aa8.49□□□□□ -1.05
SEC24D-210ENST00000511033 ARHGEF1Q92888 912 aaKnown RBP8.49□□□□□ -1.05
SEC24D-210ENST00000511033 KIF21AQ7Z4S6 1674 aa8.49□□□□□ -1.05
SEC24D-210ENST00000511033 TTC13Q8NBP0 860 aa8.48□□□□□ -1.05
SEC24D-210ENST00000511033 CERKQ8TCT0 537 aa8.48□□□□□ -1.05
SEC24D-210ENST00000511033 CEP164Q9UPV0 1460 aa8.47□□□□□ -1.05
SEC24D-210ENST00000511033 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
SEC24D-210ENST00000511033 TATDN2Q93075 761 aa8.47□□□□□ -1.05
SEC24D-210ENST00000511033 FANCD2Q9BXW9 1451 aa8.45□□□□□ -1.06
SEC24D-210ENST00000511033 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.45□□□□□ -1.06
SEC24D-210ENST00000511033 ERCC6Q03468 1493 aa8.45□□□□□ -1.06
SEC24D-210ENST00000511033 NESP48681 1621 aa8.44□□□□□ -1.06
SEC24D-210ENST00000511033 BIVM-ERCC5R4GMW8 1640 aa8.44□□□□□ -1.06
SEC24D-210ENST00000511033 A0A0G2JS52 829 aa8.44□□□□□ -1.06
SEC24D-210ENST00000511033 SAMD7Q7Z3H4 446 aa8.44□□□□□ -1.06
SEC24D-210ENST00000511033 LRCH3Q96II8 777 aa8.44□□□□□ -1.06
SEC24D-210ENST00000511033 TSR3Q9UJK0 312 aaKnown RBP8.44□□□□□ -1.06
SEC24D-210ENST00000511033 HPS5Q9UPZ3 1129 aa8.44□□□□□ -1.06
SEC24D-210ENST00000511033 ABCC8Q09428 1581 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms