RNA–Protein interactions for RNA: ENST00000510806.1

SH3RF1-204, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 591 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-204ENST00000510806 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
SH3RF1-204ENST00000510806 CTTNBP2Q8WZ74 1663 aa10.55□□□□□ -0.72
SH3RF1-204ENST00000510806 ZCCHC11Q5TAX3 1644 aaKnown RBP10.55□□□□□ -0.72
SH3RF1-204ENST00000510806 MAP3K4Q9Y6R4 1608 aa10.54□□□□□ -0.72
SH3RF1-204ENST00000510806 COL17A1Q9UMD9 1497 aaPredicted RBP10.54□□□□□ -0.72
SH3RF1-204ENST00000510806 ABCA8O94911 1581 aa10.53□□□□□ -0.72
SH3RF1-204ENST00000510806 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
SH3RF1-204ENST00000510806 WDR7Q9Y4E6 1490 aa10.51□□□□□ -0.73
SH3RF1-204ENST00000510806 POTEB3A0JP26 581 aa10.51□□□□□ -0.73
SH3RF1-204ENST00000510806 HOXB3P14651 431 aaPredicted RBP10.51□□□□□ -0.73
SH3RF1-204ENST00000510806 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
SH3RF1-204ENST00000510806 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
SH3RF1-204ENST00000510806 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
SH3RF1-204ENST00000510806 TEX14Q8IWB6 1497 aa10.49□□□□□ -0.73
SH3RF1-204ENST00000510806 MS4A4AQ96JQ5 239 aa10.49□□□□□ -0.73
SH3RF1-204ENST00000510806 EMP3P54852 163 aa10.48□□□□□ -0.73
SH3RF1-204ENST00000510806 MAGI3Q5TCQ9 1506 aa10.48□□□□□ -0.73
SH3RF1-204ENST00000510806 G3V3G9 751 aa10.46□□□□□ -0.73
SH3RF1-204ENST00000510806 VGFO15240 615 aaPredicted RBP10.46□□□□□ -0.73
SH3RF1-204ENST00000510806 TMEM92Q6UXU6 159 aa10.46□□□□□ -0.73
SH3RF1-204ENST00000510806 EEA1Q15075 1411 aa10.46□□□□□ -0.74
SH3RF1-204ENST00000510806 CD109Q6YHK3 1445 aa10.46□□□□□ -0.74
SH3RF1-204ENST00000510806 ATP10BO94823 1461 aa10.46□□□□□ -0.74
SH3RF1-204ENST00000510806 SAMD9Q5K651 1589 aa10.45□□□□□ -0.74
SH3RF1-204ENST00000510806 MICALL2Q8IY33 904 aa10.45□□□□□ -0.74
SH3RF1-204ENST00000510806 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
SH3RF1-204ENST00000510806 CFAP43Q8NDM7 1665 aa10.44□□□□□ -0.74
SH3RF1-204ENST00000510806 SPNS2Q8IVW8 549 aa10.44□□□□□ -0.74
SH3RF1-204ENST00000510806 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
SH3RF1-204ENST00000510806 PHF8Q9UPP1 1060 aa10.44□□□□□ -0.74
SH3RF1-204ENST00000510806 SOX12O15370 315 aa10.43□□□□□ -0.74
SH3RF1-204ENST00000510806 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
SH3RF1-204ENST00000510806 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
SH3RF1-204ENST00000510806 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
SH3RF1-204ENST00000510806 FAM205CA6NFA0 338 aa10.42□□□□□ -0.74
SH3RF1-204ENST00000510806 P3H3Q8IVL6 736 aa10.42□□□□□ -0.74
SH3RF1-204ENST00000510806 MMRN1Q13201 1228 aa10.41□□□□□ -0.74
SH3RF1-204ENST00000510806 ARAP3Q8WWN8 1544 aa10.41□□□□□ -0.74
SH3RF1-204ENST00000510806 ADGRL1O94910 1474 aa10.41□□□□□ -0.74
SH3RF1-204ENST00000510806 PHLDB1Q86UU1 1377 aa10.4□□□□□ -0.74
SH3RF1-204ENST00000510806 ABCA9Q8IUA7 1624 aa10.38□□□□□ -0.75
SH3RF1-204ENST00000510806 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
SH3RF1-204ENST00000510806 NUP153P49790 1475 aaKnown RBP10.37□□□□□ -0.75
SH3RF1-204ENST00000510806 RAPGEF6Q8TEU7 1601 aa10.37□□□□□ -0.75
SH3RF1-204ENST00000510806 FBXO22Q8NEZ5 403 aa10.37□□□□□ -0.75
SH3RF1-204ENST00000510806 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
SH3RF1-204ENST00000510806 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
SH3RF1-204ENST00000510806 DOK7Q18PE1 504 aa10.35□□□□□ -0.75
SH3RF1-204ENST00000510806 KIF21BO75037 1637 aa10.35□□□□□ -0.75
SH3RF1-204ENST00000510806 NEO1Q92859 1461 aa10.34□□□□□ -0.75
SH3RF1-204ENST00000510806 FHOD3Q2V2M9 1422 aa10.33□□□□□ -0.76
SH3RF1-204ENST00000510806 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
SH3RF1-204ENST00000510806 MFRPQ9BY79 579 aa10.33□□□□□ -0.76
SH3RF1-204ENST00000510806 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
SH3RF1-204ENST00000510806 PLEKHD1A6NEE1 506 aa10.32□□□□□ -0.76
SH3RF1-204ENST00000510806 PKD2Q13563 968 aa10.32□□□□□ -0.76
SH3RF1-204ENST00000510806 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
SH3RF1-204ENST00000510806 ECM2O94769 699 aaPredicted RBP10.3□□□□□ -0.76
SH3RF1-204ENST00000510806 RAPGEF3O95398 923 aa10.3□□□□□ -0.76
SH3RF1-204ENST00000510806 NLRP6P59044 892 aa10.3□□□□□ -0.76
SH3RF1-204ENST00000510806 RGL2O15211 777 aa10.29□□□□□ -0.76
SH3RF1-204ENST00000510806 RANGAP1P46060 587 aaPredicted RBP10.29□□□□□ -0.76
SH3RF1-204ENST00000510806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.28□□□□□ -0.76
SH3RF1-204ENST00000510806 FRMPD1Q5SYB0 1578 aa10.27□□□□□ -0.76
SH3RF1-204ENST00000510806 STK25O00506 426 aa10.27□□□□□ -0.77
SH3RF1-204ENST00000510806 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
SH3RF1-204ENST00000510806 ERBB3P21860 1342 aa10.27□□□□□ -0.77
SH3RF1-204ENST00000510806 AKNAQ7Z591 1439 aa10.26□□□□□ -0.77
SH3RF1-204ENST00000510806 ADAMTSL3P82987 1691 aa10.26□□□□□ -0.77
SH3RF1-204ENST00000510806 HECW2Q9P2P5 1572 aa10.26□□□□□ -0.77
SH3RF1-204ENST00000510806 ARHGAP35Q9NRY4 1499 aa10.25□□□□□ -0.77
SH3RF1-204ENST00000510806 RIMBP2O15034 1052 aa10.25□□□□□ -0.77
SH3RF1-204ENST00000510806 UBTFP17480 764 aaKnown RBP10.25□□□□□ -0.77
SH3RF1-204ENST00000510806 VARS2Q5ST30 1063 aaKnown RBP10.25□□□□□ -0.77
SH3RF1-204ENST00000510806 ZSWIM6Q9HCJ5 1215 aa10.25□□□□□ -0.77
SH3RF1-204ENST00000510806 TAOK2Q9UL54 1235 aa10.25□□□□□ -0.77
SH3RF1-204ENST00000510806 FMN1Q68DA7 1419 aa10.24□□□□□ -0.77
SH3RF1-204ENST00000510806 FANCAO15360 1455 aa10.24□□□□□ -0.77
SH3RF1-204ENST00000510806 DENND4BO75064 1496 aaPredicted RBP10.24□□□□□ -0.77
SH3RF1-204ENST00000510806 RICTORQ6R327 1708 aa10.24□□□□□ -0.77
SH3RF1-204ENST00000510806 PLCH2O75038 1416 aa10.24□□□□□ -0.77
SH3RF1-204ENST00000510806 PTPRMP28827 1452 aa10.23□□□□□ -0.77
SH3RF1-204ENST00000510806 CDK13Q14004 1512 aaKnown RBP10.23□□□□□ -0.77
SH3RF1-204ENST00000510806 TTC37Q6PGP7 1564 aa10.22□□□□□ -0.77
SH3RF1-204ENST00000510806 KIF3CO14782 793 aa10.22□□□□□ -0.77
SH3RF1-204ENST00000510806 MAGI2Q86UL8 1455 aa10.22□□□□□ -0.77
SH3RF1-204ENST00000510806 ZMYM4Q5VZL5 1548 aa10.22□□□□□ -0.77
SH3RF1-204ENST00000510806 BCORL1Q5H9F3 1711 aa10.21□□□□□ -0.77
SH3RF1-204ENST00000510806 CFAP74Q9C0B2 1584 aa10.21□□□□□ -0.78
SH3RF1-204ENST00000510806 KHSRPQ92945 711 aaKnown RBP eCLIP10.2□□□□□ -0.78
SH3RF1-204ENST00000510806 CDK11AQ9UQ88 783 aaPredicted RBP10.2□□□□□ -0.78
SH3RF1-204ENST00000510806 ARHGEF40Q8TER5 1519 aa10.19□□□□□ -0.78
SH3RF1-204ENST00000510806 ARSIQ5FYB1 569 aa10.19□□□□□ -0.78
SH3RF1-204ENST00000510806 HECW1Q76N89 1606 aa10.18□□□□□ -0.78
SH3RF1-204ENST00000510806 SCAPERQ9BY12 1400 aa10.18□□□□□ -0.78
SH3RF1-204ENST00000510806 C2orf72A6NCS6 295 aa10.18□□□□□ -0.78
SH3RF1-204ENST00000510806 EFCAB2Q5VUJ9 269 aa10.18□□□□□ -0.78
SH3RF1-204ENST00000510806 TROQ12816 1431 aaPredicted RBP10.17□□□□□ -0.78
SH3RF1-204ENST00000510806 YEATS2Q9ULM3 1422 aa10.17□□□□□ -0.78
SH3RF1-204ENST00000510806 POGZQ7Z3K3 1410 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms