RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 NCOA1Q15788 1441 aa13.88□□□□□ -0.19
CALCOCO2-217ENST00000510356 RTN4Q9NQC3 1192 aaKnown RBP13.87□□□□□ -0.19
CALCOCO2-217ENST00000510356 RANGAP1P46060 587 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO2-217ENST00000510356 CNTLNQ9NXG0 1405 aa13.86□□□□□ -0.19
CALCOCO2-217ENST00000510356 PKD2Q13563 968 aa13.84□□□□□ -0.19
CALCOCO2-217ENST00000510356 AFAP1Q8N556 730 aa13.84□□□□□ -0.19
CALCOCO2-217ENST00000510356 REREQ9P2R6 1566 aa13.83□□□□□ -0.2
CALCOCO2-217ENST00000510356 AGLP35573 1532 aa13.82□□□□□ -0.2
CALCOCO2-217ENST00000510356 NPATQ14207 1427 aa13.81□□□□□ -0.2
CALCOCO2-217ENST00000510356 ZNF335Q9H4Z2 1342 aaPredicted RBP13.81□□□□□ -0.2
CALCOCO2-217ENST00000510356 TOM1O60784 492 aa13.8□□□□□ -0.2
CALCOCO2-217ENST00000510356 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO2-217ENST00000510356 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
CALCOCO2-217ENST00000510356 KDM5CP41229 1560 aa13.79□□□□□ -0.2
CALCOCO2-217ENST00000510356 C3P01024 1663 aa13.79□□□□□ -0.2
CALCOCO2-217ENST00000510356 ATP1B4Q9UN42 357 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO2-217ENST00000510356 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
CALCOCO2-217ENST00000510356 NCKAP5LQ9HCH0 1330 aa13.78□□□□□ -0.2
CALCOCO2-217ENST00000510356 ARHGAP5Q13017 1502 aa13.77□□□□□ -0.21
CALCOCO2-217ENST00000510356 MYO5CQ9NQX4 1742 aa13.77□□□□□ -0.21
CALCOCO2-217ENST00000510356 DIP2CQ9Y2E4 1556 aa13.77□□□□□ -0.21
CALCOCO2-217ENST00000510356 CDK13Q14004 1512 aaKnown RBP13.76□□□□□ -0.21
CALCOCO2-217ENST00000510356 CLIP1P30622 1438 aa13.76□□□□□ -0.21
CALCOCO2-217ENST00000510356 HSPA1LP34931 641 aa13.76□□□□□ -0.21
CALCOCO2-217ENST00000510356 PLA2R1Q13018 1463 aa13.75□□□□□ -0.21
CALCOCO2-217ENST00000510356 EEA1Q15075 1411 aa13.75□□□□□ -0.21
CALCOCO2-217ENST00000510356 NUBP1P53384 320 aa13.75□□□□□ -0.21
CALCOCO2-217ENST00000510356 FMN1Q68DA7 1419 aa13.74□□□□□ -0.21
CALCOCO2-217ENST00000510356 ZMYM3Q14202 1370 aa13.74□□□□□ -0.21
CALCOCO2-217ENST00000510356 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
CALCOCO2-217ENST00000510356 MED1Q15648 1581 aaPredicted RBP13.72□□□□□ -0.21
CALCOCO2-217ENST00000510356 TROQ12816 1431 aaPredicted RBP13.72□□□□□ -0.21
CALCOCO2-217ENST00000510356 KIF14Q15058 1648 aa13.72□□□□□ -0.21
CALCOCO2-217ENST00000510356 TCOF1Q13428 1488 aaKnown RBP13.69□□□□□ -0.22
CALCOCO2-217ENST00000510356 ABCA6Q8N139 1617 aa13.69□□□□□ -0.22
CALCOCO2-217ENST00000510356 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
CALCOCO2-217ENST00000510356 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
CALCOCO2-217ENST00000510356 CPS1P31327 1500 aa13.68□□□□□ -0.22
CALCOCO2-217ENST00000510356 PTPRKQ15262 1439 aa13.67□□□□□ -0.22
CALCOCO2-217ENST00000510356 HAX1O00165 279 aa13.67□□□□□ -0.22
CALCOCO2-217ENST00000510356 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
CALCOCO2-217ENST00000510356 SPAG9O60271 1321 aaKnown RBP13.64□□□□□ -0.23
CALCOCO2-217ENST00000510356 CEP170BQ9Y4F5 1589 aaPredicted RBP13.64□□□□□ -0.23
CALCOCO2-217ENST00000510356 DCAF8Q5TAQ9 597 aa13.64□□□□□ -0.23
CALCOCO2-217ENST00000510356 ABCC1P33527 1531 aa13.64□□□□□ -0.23
CALCOCO2-217ENST00000510356 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
CALCOCO2-217ENST00000510356 ZNF142P52746 1687 aaPredicted RBP13.63□□□□□ -0.23
CALCOCO2-217ENST00000510356 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
CALCOCO2-217ENST00000510356 GSE1Q14687 1217 aa13.61□□□□□ -0.23
CALCOCO2-217ENST00000510356 GGT6Q6P531 493 aa13.61□□□□□ -0.23
CALCOCO2-217ENST00000510356 ANKLE2Q86XL3 938 aa13.61□□□□□ -0.23
CALCOCO2-217ENST00000510356 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
CALCOCO2-217ENST00000510356 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
CALCOCO2-217ENST00000510356 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
CALCOCO2-217ENST00000510356 UBTFP17480 764 aaKnown RBP13.6□□□□□ -0.23
CALCOCO2-217ENST00000510356 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
CALCOCO2-217ENST00000510356 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO2-217ENST00000510356 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO2-217ENST00000510356 ITSN2Q9NZM3 1697 aa13.59□□□□□ -0.23
CALCOCO2-217ENST00000510356 CDC42BPBQ9Y5S2 1711 aa13.59□□□□□ -0.23
CALCOCO2-217ENST00000510356 PREX2Q70Z35 1606 aa13.58□□□□□ -0.24
CALCOCO2-217ENST00000510356 THEMISQ8N1K5 641 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO2-217ENST00000510356 SAMD9LQ8IVG5 1584 aa13.57□□□□□ -0.24
CALCOCO2-217ENST00000510356 A2MP01023 1474 aa13.56□□□□□ -0.24
CALCOCO2-217ENST00000510356 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
CALCOCO2-217ENST00000510356 PLEKHH2Q8IVE3 1493 aa13.55□□□□□ -0.24
CALCOCO2-217ENST00000510356 ECM2O94769 699 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO2-217ENST00000510356 CLTCQ00610 1675 aaKnown RBP13.55□□□□□ -0.24
CALCOCO2-217ENST00000510356 HNRNPMP52272 730 aaKnown RBP eCLIP13.54□□□□□ -0.24
CALCOCO2-217ENST00000510356 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
CALCOCO2-217ENST00000510356 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
CALCOCO2-217ENST00000510356 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
CALCOCO2-217ENST00000510356 ATP7AQ04656 1500 aa13.53□□□□□ -0.24
CALCOCO2-217ENST00000510356 TNRQ92752 1358 aa13.52□□□□□ -0.25
CALCOCO2-217ENST00000510356 CD44P16070 742 aaKnown RBP13.51□□□□□ -0.25
CALCOCO2-217ENST00000510356 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO2-217ENST00000510356 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
CALCOCO2-217ENST00000510356 NPHP4O75161 1426 aaPredicted RBP13.5□□□□□ -0.25
CALCOCO2-217ENST00000510356 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
CALCOCO2-217ENST00000510356 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
CALCOCO2-217ENST00000510356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.49□□□□□ -0.25
CALCOCO2-217ENST00000510356 RGS17Q9UGC6 210 aaPredicted RBP13.49□□□□□ -0.25
CALCOCO2-217ENST00000510356 MED14O60244 1454 aa13.48□□□□□ -0.25
CALCOCO2-217ENST00000510356 CASKIN1Q8WXD9 1431 aa13.48□□□□□ -0.25
CALCOCO2-217ENST00000510356 POLR1AO95602 1720 aaPredicted RBP13.48□□□□□ -0.25
CALCOCO2-217ENST00000510356 C19orf67A6NJJ6 358 aa13.48□□□□□ -0.25
CALCOCO2-217ENST00000510356 NEURL4Q96JN8 1562 aa13.48□□□□□ -0.25
CALCOCO2-217ENST00000510356 FAM135AQ9P2D6 1515 aa13.48□□□□□ -0.25
CALCOCO2-217ENST00000510356 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
CALCOCO2-217ENST00000510356 VWDEQ8N2E2 1590 aa13.47□□□□□ -0.25
CALCOCO2-217ENST00000510356 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
CALCOCO2-217ENST00000510356 WASHC2CQ9Y4E1 1318 aa13.46□□□□□ -0.25
CALCOCO2-217ENST00000510356 PYGBP11216 843 aa13.46□□□□□ -0.25
CALCOCO2-217ENST00000510356 FBXO31Q5XUX0 539 aaPredicted RBP13.46□□□□□ -0.25
CALCOCO2-217ENST00000510356 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
CALCOCO2-217ENST00000510356 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
CALCOCO2-217ENST00000510356 MIA2Q96PC5 1412 aa13.46□□□□□ -0.26
CALCOCO2-217ENST00000510356 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
CALCOCO2-217ENST00000510356 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO2-217ENST00000510356 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms