RNA–Protein interactions for RNA: ENST00000510224.5

PROM1-210, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PROM1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-210ENST00000510224 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
PROM1-210ENST00000510224 C3P01024 1663 aa12.01□□□□□ -0.49
PROM1-210ENST00000510224 TNRQ92752 1358 aa12□□□□□ -0.49
PROM1-210ENST00000510224 REREQ9P2R6 1566 aa12□□□□□ -0.49
PROM1-210ENST00000510224 CHGAP10645 457 aaKnown RBP12□□□□□ -0.49
PROM1-210ENST00000510224 ANKRD30AQ9BXX3 1397 aa11.99□□□□□ -0.49
PROM1-210ENST00000510224 ABCC5O15440 1437 aa11.99□□□□□ -0.49
PROM1-210ENST00000510224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.98□□□□□ -0.49
PROM1-210ENST00000510224 THEMISQ8N1K5 641 aaPredicted RBP11.98□□□□□ -0.49
PROM1-210ENST00000510224 ZNF335Q9H4Z2 1342 aaPredicted RBP11.98□□□□□ -0.49
PROM1-210ENST00000510224 PREX1Q8TCU6 1659 aa11.98□□□□□ -0.49
PROM1-210ENST00000510224 ADGBQ8N7X0 1667 aa11.98□□□□□ -0.49
PROM1-210ENST00000510224 KANK1Q14678 1352 aa11.97□□□□□ -0.49
PROM1-210ENST00000510224 ANKLE2Q86XL3 938 aa11.97□□□□□ -0.49
PROM1-210ENST00000510224 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
PROM1-210ENST00000510224 PTPN23Q9H3S7 1636 aa11.96□□□□□ -0.49
PROM1-210ENST00000510224 DAPK1P53355 1430 aa11.96□□□□□ -0.49
PROM1-210ENST00000510224 PLXNC1O60486 1568 aa11.95□□□□□ -0.5
PROM1-210ENST00000510224 CAMSAP1Q5T5Y3 1602 aa11.95□□□□□ -0.5
PROM1-210ENST00000510224 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
PROM1-210ENST00000510224 NPATQ14207 1427 aa11.95□□□□□ -0.5
PROM1-210ENST00000510224 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
PROM1-210ENST00000510224 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
PROM1-210ENST00000510224 PKD2Q13563 968 aa11.94□□□□□ -0.5
PROM1-210ENST00000510224 TRIM52Q96A61 297 aa11.93□□□□□ -0.5
PROM1-210ENST00000510224 TXNDC2Q86VQ3 553 aa11.92□□□□□ -0.5
PROM1-210ENST00000510224 KDM5DQ9BY66 1539 aa11.92□□□□□ -0.5
PROM1-210ENST00000510224 NCOA1Q15788 1441 aa11.91□□□□□ -0.5
PROM1-210ENST00000510224 NUTM2DQ5VT03 806 aaPredicted RBP11.91□□□□□ -0.5
PROM1-210ENST00000510224 EID1Q9Y6B2 187 aa11.91□□□□□ -0.5
PROM1-210ENST00000510224 DUOX2Q9NRD8 1548 aa11.9□□□□□ -0.5
PROM1-210ENST00000510224 PPP1R15AO75807 674 aaPredicted RBP11.9□□□□□ -0.5
PROM1-210ENST00000510224 CEP170BQ9Y4F5 1589 aaPredicted RBP11.89□□□□□ -0.51
PROM1-210ENST00000510224 ANKRD50Q9ULJ7 1429 aa11.89□□□□□ -0.51
PROM1-210ENST00000510224 PZPP20742 1482 aa11.89□□□□□ -0.51
PROM1-210ENST00000510224 FAM135AQ9P2D6 1515 aa11.89□□□□□ -0.51
PROM1-210ENST00000510224 IDI1Q13907 227 aa11.88□□□□□ -0.51
PROM1-210ENST00000510224 A2ML1A8K2U0 1454 aa11.88□□□□□ -0.51
PROM1-210ENST00000510224 SLC26A8Q96RN1 970 aa11.88□□□□□ -0.51
PROM1-210ENST00000510224 STRCQ7RTU9 1775 aa11.87□□□□□ -0.51
PROM1-210ENST00000510224 RBM33Q96EV2 1170 aaKnown RBP11.87□□□□□ -0.51
PROM1-210ENST00000510224 MROH2AA6NES4 1674 aa11.87□□□□□ -0.51
PROM1-210ENST00000510224 UGGT1Q9NYU2 1555 aa11.87□□□□□ -0.51
PROM1-210ENST00000510224 ABCC3O15438 1527 aa11.86□□□□□ -0.51
PROM1-210ENST00000510224 NUP155O75694 1391 aa11.86□□□□□ -0.51
PROM1-210ENST00000510224 MYO3AQ8NEV4 1616 aa11.86□□□□□ -0.51
PROM1-210ENST00000510224 PTPRTO14522 1441 aa11.86□□□□□ -0.51
PROM1-210ENST00000510224 DNMT1P26358 1616 aaKnown RBP11.85□□□□□ -0.51
PROM1-210ENST00000510224 ERBINQ96RT1 1412 aa11.85□□□□□ -0.51
PROM1-210ENST00000510224 LTKP29376 864 aa11.85□□□□□ -0.51
PROM1-210ENST00000510224 TCOF1Q13428 1488 aaKnown RBP11.85□□□□□ -0.51
PROM1-210ENST00000510224 SHANK2Q9UPX8 1470 aa11.84□□□□□ -0.51
PROM1-210ENST00000510224 MAST1Q9Y2H9 1570 aa11.84□□□□□ -0.51
PROM1-210ENST00000510224 CEP152O94986 1710 aa11.84□□□□□ -0.51
PROM1-210ENST00000510224 ZNF326Q5BKZ1 582 aaKnown RBP11.83□□□□□ -0.51
PROM1-210ENST00000510224 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
PROM1-210ENST00000510224 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
PROM1-210ENST00000510224 NLRP1Q9C000 1473 aa11.82□□□□□ -0.52
PROM1-210ENST00000510224 RRBP1Q9P2E9 1410 aaKnown RBP11.82□□□□□ -0.52
PROM1-210ENST00000510224 NPHP4O75161 1426 aaPredicted RBP11.82□□□□□ -0.52
PROM1-210ENST00000510224 TOM1O60784 492 aa11.81□□□□□ -0.52
PROM1-210ENST00000510224 PLA2R1Q13018 1463 aa11.8□□□□□ -0.52
PROM1-210ENST00000510224 SLC52A1Q9NWF4 448 aa11.79□□□□□ -0.52
PROM1-210ENST00000510224 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
PROM1-210ENST00000510224 PCGF6Q9BYE7 350 aa11.79□□□□□ -0.52
PROM1-210ENST00000510224 PROSER2Q86WR7 435 aaPredicted RBP11.78□□□□□ -0.52
PROM1-210ENST00000510224 CROCC2H7BZ55 1655 aa11.78□□□□□ -0.52
PROM1-210ENST00000510224 RNF17Q9BXT8 1623 aaKnown RBP11.78□□□□□ -0.52
PROM1-210ENST00000510224 EIF2AK4Q9P2K8 1649 aaKnown RBP11.78□□□□□ -0.52
PROM1-210ENST00000510224 SLC4A1APQ9BWU0 796 aaKnown RBP11.77□□□□□ -0.52
PROM1-210ENST00000510224 MROH1Q8NDA8 1641 aa11.77□□□□□ -0.53
PROM1-210ENST00000510224 HDGFP51858 240 aaKnown RBP11.77□□□□□ -0.53
PROM1-210ENST00000510224 FOXD1Q16676 465 aa11.76□□□□□ -0.53
PROM1-210ENST00000510224 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
PROM1-210ENST00000510224 TMEM2Q9UHN6 1383 aa11.76□□□□□ -0.53
PROM1-210ENST00000510224 PRDM15P57071 1507 aaPredicted RBP11.75□□□□□ -0.53
PROM1-210ENST00000510224 SCAF11Q99590 1463 aaKnown RBP11.75□□□□□ -0.53
PROM1-210ENST00000510224 ADGRL2O95490 1459 aa11.75□□□□□ -0.53
PROM1-210ENST00000510224 SPATA31D1Q6ZQQ2 1576 aa11.74□□□□□ -0.53
PROM1-210ENST00000510224 ZNF142P52746 1687 aaPredicted RBP11.74□□□□□ -0.53
PROM1-210ENST00000510224 HSPA1LP34931 641 aa11.74□□□□□ -0.53
PROM1-210ENST00000510224 ARHGAP31Q2M1Z3 1444 aa11.74□□□□□ -0.53
PROM1-210ENST00000510224 ZC3H13Q5T200 1668 aaKnown RBP11.74□□□□□ -0.53
PROM1-210ENST00000510224 LTBP4Q8N2S1 1624 aa11.73□□□□□ -0.53
PROM1-210ENST00000510224 ROCK1Q13464 1354 aa11.73□□□□□ -0.53
PROM1-210ENST00000510224 RGL3Q3MIN7 710 aa11.72□□□□□ -0.53
PROM1-210ENST00000510224 EFCAB6Q5THR3 1501 aa11.71□□□□□ -0.53
PROM1-210ENST00000510224 NAIPQ13075 1403 aa11.71□□□□□ -0.53
PROM1-210ENST00000510224 PIK3C2BO00750 1634 aa11.71□□□□□ -0.54
PROM1-210ENST00000510224 NEURL4Q96JN8 1562 aa11.7□□□□□ -0.54
PROM1-210ENST00000510224 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.7□□□□□ -0.54
PROM1-210ENST00000510224 PHF23Q9BUL5 403 aaPredicted RBP11.69□□□□□ -0.54
PROM1-210ENST00000510224 SETD5Q9C0A6 1442 aa11.69□□□□□ -0.54
PROM1-210ENST00000510224 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
PROM1-210ENST00000510224 POLR1AO95602 1720 aaPredicted RBP11.69□□□□□ -0.54
PROM1-210ENST00000510224 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
PROM1-210ENST00000510224 NOS1P29475 1434 aa11.68□□□□□ -0.54
PROM1-210ENST00000510224 TMEM94Q12767 1356 aa11.68□□□□□ -0.54
PROM1-210ENST00000510224 KCNA6P17658 529 aa11.68□□□□□ -0.54
PROM1-210ENST00000510224 HFM1A2PYH4 1435 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms