RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 MAST1Q9Y2H9 1570 aa6.86□□□□□ -1.31
PDLIM5-214ENST00000510099 TEX14Q8IWB6 1497 aa6.85□□□□□ -1.31
PDLIM5-214ENST00000510099 ANKRD30BQ9BXX2 1392 aa6.85□□□□□ -1.31
PDLIM5-214ENST00000510099 POTEIP0CG38 1075 aa6.85□□□□□ -1.31
PDLIM5-214ENST00000510099 MPHOSPH9Q99550 1183 aa6.85□□□□□ -1.31
PDLIM5-214ENST00000510099 ZCCHC11Q5TAX3 1644 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-214ENST00000510099 RPRD2Q5VT52 1461 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-214ENST00000510099 PLEKHH2Q8IVE3 1493 aa6.85□□□□□ -1.31
PDLIM5-214ENST00000510099 ANKRD50Q9ULJ7 1429 aa6.84□□□□□ -1.31
PDLIM5-214ENST00000510099 MIER1Q8N108 512 aa6.84□□□□□ -1.31
PDLIM5-214ENST00000510099 TRIM52Q96A61 297 aa6.84□□□□□ -1.31
PDLIM5-214ENST00000510099 FARP1Q9Y4F1 1045 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-214ENST00000510099 SYCP2Q9BX26 1530 aa6.84□□□□□ -1.31
PDLIM5-214ENST00000510099 CDC42BPBQ9Y5S2 1711 aa6.84□□□□□ -1.31
PDLIM5-214ENST00000510099 KIAA1107Q9UPP5 1409 aa6.84□□□□□ -1.32
PDLIM5-214ENST00000510099 KIF15Q9NS87 1388 aa6.83□□□□□ -1.32
PDLIM5-214ENST00000510099 ARHGAP5Q13017 1502 aa6.83□□□□□ -1.32
PDLIM5-214ENST00000510099 ARAP3Q8WWN8 1544 aa6.83□□□□□ -1.32
PDLIM5-214ENST00000510099 ZNF777Q9ULD5 760 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-214ENST00000510099 PLXNC1O60486 1568 aa6.82□□□□□ -1.32
PDLIM5-214ENST00000510099 DCBLD2Q96PD2 775 aa6.82□□□□□ -1.32
PDLIM5-214ENST00000510099 PLCH2O75038 1416 aa6.82□□□□□ -1.32
PDLIM5-214ENST00000510099 MYO5CQ9NQX4 1742 aa6.81□□□□□ -1.32
PDLIM5-214ENST00000510099 ABCC1P33527 1531 aa6.81□□□□□ -1.32
PDLIM5-214ENST00000510099 WDR7Q9Y4E6 1490 aa6.81□□□□□ -1.32
PDLIM5-214ENST00000510099 CENPBP07199 599 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-214ENST00000510099 RSPH4AQ5TD94 716 aa6.81□□□□□ -1.32
PDLIM5-214ENST00000510099 UNC13BO14795 1591 aa6.8□□□□□ -1.32
PDLIM5-214ENST00000510099 ARHGEF12Q9NZN5 1544 aa6.8□□□□□ -1.32
PDLIM5-214ENST00000510099 MAGI2Q86UL8 1455 aa6.79□□□□□ -1.32
PDLIM5-214ENST00000510099 TSPY4P0CV99 314 aa6.79□□□□□ -1.32
PDLIM5-214ENST00000510099 TSPY10P0CW01 314 aa6.79□□□□□ -1.32
PDLIM5-214ENST00000510099 ERBINQ96RT1 1412 aa6.78□□□□□ -1.32
PDLIM5-214ENST00000510099 FAM135AQ9P2D6 1515 aa6.78□□□□□ -1.32
PDLIM5-214ENST00000510099 HNRNPMP52272 730 aaKnown RBP eCLIP6.78□□□□□ -1.325e-6■■■□□ 18.5
PDLIM5-214ENST00000510099 NUP155O75694 1391 aa6.78□□□□□ -1.32
PDLIM5-214ENST00000510099 ZFYVE16Q7Z3T8 1539 aa6.77□□□□□ -1.33
PDLIM5-214ENST00000510099 DUOX2Q9NRD8 1548 aa6.77□□□□□ -1.33
PDLIM5-214ENST00000510099 ABCA9Q8IUA7 1624 aa6.77□□□□□ -1.33
PDLIM5-214ENST00000510099 L3MBTL2Q969R5 705 aa6.77□□□□□ -1.33
PDLIM5-214ENST00000510099 PKD2Q13563 968 aa6.76□□□□□ -1.33
PDLIM5-214ENST00000510099 ZRANB1Q9UGI0 708 aa6.76□□□□□ -1.33
PDLIM5-214ENST00000510099 IQGAP3Q86VI3 1631 aa6.76□□□□□ -1.33
PDLIM5-214ENST00000510099 RTEL1-TNFRSF6BF6WH68 1400 aa6.76□□□□□ -1.33
PDLIM5-214ENST00000510099 UHRF1BP1Q6BDS2 1440 aa6.76□□□□□ -1.33
PDLIM5-214ENST00000510099 ASXL2Q76L83 1435 aa6.76□□□□□ -1.33
PDLIM5-214ENST00000510099 TRAPPC8Q9Y2L5 1435 aa6.76□□□□□ -1.33
PDLIM5-214ENST00000510099 EFCAB2Q5VUJ9 269 aa6.75□□□□□ -1.33
PDLIM5-214ENST00000510099 SPATA31E1Q6ZUB1 1445 aa6.75□□□□□ -1.33
PDLIM5-214ENST00000510099 INO80Q9ULG1 1556 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-214ENST00000510099 RALGAPBQ86X10 1494 aa6.74□□□□□ -1.33
PDLIM5-214ENST00000510099 HSPA5P11021 654 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-214ENST00000510099 CLCN6P51797 869 aa6.74□□□□□ -1.33
PDLIM5-214ENST00000510099 FANCAO15360 1455 aa6.73□□□□□ -1.33
PDLIM5-214ENST00000510099 EIF4G2P78344 907 aaKnown RBP eCLIP6.73□□□□□ -1.33
PDLIM5-214ENST00000510099 NBPF8Q3BBV2 869 aa6.73□□□□□ -1.33
PDLIM5-214ENST00000510099 KCNH8Q96L42 1107 aa6.73□□□□□ -1.33
PDLIM5-214ENST00000510099 YTHDC1Q96MU7 727 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-214ENST00000510099 ATP10AO60312 1499 aa6.73□□□□□ -1.33
PDLIM5-214ENST00000510099 PLA2R1Q13018 1463 aa6.73□□□□□ -1.33
PDLIM5-214ENST00000510099 ATP7AQ04656 1500 aa6.72□□□□□ -1.33
PDLIM5-214ENST00000510099 DDX10Q13206 875 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-214ENST00000510099 ZNF579Q8NAF0 562 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-214ENST00000510099 ADGRL1O94910 1474 aa6.72□□□□□ -1.33
PDLIM5-214ENST00000510099 CNTLNQ9NXG0 1405 aa6.71□□□□□ -1.34
PDLIM5-214ENST00000510099 HIRIP3Q9BW71 556 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-214ENST00000510099 DEPDC5O75140 1603 aa6.71□□□□□ -1.34
PDLIM5-214ENST00000510099 WASHC2AQ641Q2 1341 aa6.71□□□□□ -1.34
PDLIM5-214ENST00000510099 CCDC7Q96M83 1385 aa6.7□□□□□ -1.34
PDLIM5-214ENST00000510099 VWDEQ8N2E2 1590 aa6.7□□□□□ -1.34
PDLIM5-214ENST00000510099 CCDC144AA2RUR9 1427 aa6.7□□□□□ -1.34
PDLIM5-214ENST00000510099 CCER2I3L3R5 266 aa6.7□□□□□ -1.34
PDLIM5-214ENST00000510099 GALR2O43603 387 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-214ENST00000510099 SPAG9O60271 1321 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-214ENST00000510099 PRDM15P57071 1507 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-214ENST00000510099 USP47Q96K76 1375 aa6.69□□□□□ -1.34
PDLIM5-214ENST00000510099 KDM5CP41229 1560 aa6.69□□□□□ -1.34
PDLIM5-214ENST00000510099 CFAP74Q9C0B2 1584 aa6.69□□□□□ -1.34
PDLIM5-214ENST00000510099 EIF2AK4Q9P2K8 1649 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-214ENST00000510099 POGZQ7Z3K3 1410 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 PRAG1Q86YV5 1406 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 SCAPERQ9BY12 1400 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 A2MP01023 1474 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 ZNF518AQ6AHZ1 1483 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 TRPM2O94759 1503 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 ANP32CO43423 234 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 CREBZFQ9NS37 354 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 MROH1Q8NDA8 1641 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 GPRASP1Q5JY77 1395 aa6.68□□□□□ -1.34
PDLIM5-214ENST00000510099 PTPRTO14522 1441 aa6.67□□□□□ -1.34
PDLIM5-214ENST00000510099 POLR1AO95602 1720 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-214ENST00000510099 AFAP1Q8N556 730 aa6.67□□□□□ -1.34
PDLIM5-214ENST00000510099 GTF3C3Q9Y5Q9 886 aa6.67□□□□□ -1.34
PDLIM5-214ENST00000510099 LAMC1P11047 1609 aa6.67□□□□□ -1.34
PDLIM5-214ENST00000510099 KIF7Q2M1P5 1343 aa6.67□□□□□ -1.34
PDLIM5-214ENST00000510099 TET3O43151 1660 aa6.67□□□□□ -1.34
PDLIM5-214ENST00000510099 NEO1Q92859 1461 aa6.66□□□□□ -1.34
PDLIM5-214ENST00000510099 LMTK2Q8IWU2 1503 aa6.66□□□□□ -1.34
PDLIM5-214ENST00000510099 RNF17Q9BXT8 1623 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-214ENST00000510099 OTUD5Q96G74 571 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms