RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
SSBP2-214ENST00000510060 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.33
SSBP2-214ENST00000510060 MAP3K7O43318 606 aa13.01□□□□□ -0.33
SSBP2-214ENST00000510060 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
SSBP2-214ENST00000510060 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
SSBP2-214ENST00000510060 C6orf132Q5T0Z8 1188 aa13□□□□□ -0.33
SSBP2-214ENST00000510060 DMRTA1Q5VZB9 504 aa13□□□□□ -0.33
SSBP2-214ENST00000510060 ADGRD1Q6QNK2 874 aa13□□□□□ -0.33
SSBP2-214ENST00000510060 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
SSBP2-214ENST00000510060 OSBPP22059 807 aa12.97□□□□□ -0.33
SSBP2-214ENST00000510060 SMYD5Q6GMV2 418 aa12.96□□□□□ -0.33
SSBP2-214ENST00000510060 ZBED2Q9BTP6 218 aa12.96□□□□□ -0.33
SSBP2-214ENST00000510060 SEMA3EO15041 775 aa12.95□□□□□ -0.34
SSBP2-214ENST00000510060 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
SSBP2-214ENST00000510060 MLLT3P42568 568 aaPredicted RBP12.94□□□□□ -0.34
SSBP2-214ENST00000510060 STAC3Q96MF2 364 aa12.94□□□□□ -0.34
SSBP2-214ENST00000510060 VPS9D1Q9Y2B5 631 aa12.94□□□□□ -0.34
SSBP2-214ENST00000510060 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
SSBP2-214ENST00000510060 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
SSBP2-214ENST00000510060 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
SSBP2-214ENST00000510060 COL9A1P20849 921 aa12.91□□□□□ -0.34
SSBP2-214ENST00000510060 TSR1Q2NL82 804 aaKnown RBP12.91□□□□□ -0.34
SSBP2-214ENST00000510060 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
SSBP2-214ENST00000510060 HRO43593 1189 aa12.89□□□□□ -0.35
SSBP2-214ENST00000510060 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
SSBP2-214ENST00000510060 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
SSBP2-214ENST00000510060 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
SSBP2-214ENST00000510060 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
SSBP2-214ENST00000510060 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
SSBP2-214ENST00000510060 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
SSBP2-214ENST00000510060 TRIM6-TRIM34B2RNG4 842 aa12.84□□□□□ -0.35
SSBP2-214ENST00000510060 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
SSBP2-214ENST00000510060 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
SSBP2-214ENST00000510060 BHMG1C9JSJ3 638 aaPredicted RBP12.82□□□□□ -0.36
SSBP2-214ENST00000510060 PRSS12P56730 875 aa12.82□□□□□ -0.36
SSBP2-214ENST00000510060 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
SSBP2-214ENST00000510060 CDHR5Q9HBB8 845 aa12.82□□□□□ -0.36
SSBP2-214ENST00000510060 PACS2Q86VP3 889 aa12.81□□□□□ -0.36
SSBP2-214ENST00000510060 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
SSBP2-214ENST00000510060 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
SSBP2-214ENST00000510060 KIAA1468Q9P260 1216 aa12.8□□□□□ -0.36
SSBP2-214ENST00000510060 GOLGA8CPA6NN73 597 aa12.79□□□□□ -0.36
SSBP2-214ENST00000510060 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
SSBP2-214ENST00000510060 FCHSD2O94868 740 aa12.76□□□□□ -0.37
SSBP2-214ENST00000510060 PTGDRQ13258 359 aa12.76□□□□□ -0.37
SSBP2-214ENST00000510060 NPDC1Q9NQX5 325 aaPredicted RBP12.76□□□□□ -0.37
SSBP2-214ENST00000510060 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
SSBP2-214ENST00000510060 NBPF26B4DH59 902 aa12.75□□□□□ -0.37
SSBP2-214ENST00000510060 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
SSBP2-214ENST00000510060 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
SSBP2-214ENST00000510060 PADI6Q6TGC4 694 aa12.71□□□□□ -0.37
SSBP2-214ENST00000510060 HIC1Q14526 733 aa12.7□□□□□ -0.38
SSBP2-214ENST00000510060 TTC13Q8NBP0 860 aa12.7□□□□□ -0.38
SSBP2-214ENST00000510060 ANKK1Q8NFD2 765 aa12.7□□□□□ -0.38
SSBP2-214ENST00000510060 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
SSBP2-214ENST00000510060 GPIHBP1Q8IV16 184 aa12.69□□□□□ -0.38
SSBP2-214ENST00000510060 WNT2BQ93097 391 aa12.69□□□□□ -0.38
SSBP2-214ENST00000510060 SEPT9Q9UHD8 586 aaPredicted RBP12.69□□□□□ -0.38
SSBP2-214ENST00000510060 TATDN2Q93075 761 aa12.68□□□□□ -0.38
SSBP2-214ENST00000510060 HCSTQ9UBK5 93 aa12.68□□□□□ -0.38
SSBP2-214ENST00000510060 FAM198AQ9UFP1 575 aa12.68□□□□□ -0.38
SSBP2-214ENST00000510060 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
SSBP2-214ENST00000510060 ZFRQ96KR1 1074 aaKnown RBP12.67□□□□□ -0.38
SSBP2-214ENST00000510060 THSD4Q6ZMP0 1018 aa12.64□□□□□ -0.39
SSBP2-214ENST00000510060 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
SSBP2-214ENST00000510060 GNPATO15228 680 aa12.63□□□□□ -0.39
SSBP2-214ENST00000510060 HDGFP51858 240 aaKnown RBP12.62□□□□□ -0.39
SSBP2-214ENST00000510060 SMAPO00193 183 aa12.61□□□□□ -0.39
SSBP2-214ENST00000510060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSBP2-214ENST00000510060 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
SSBP2-214ENST00000510060 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
SSBP2-214ENST00000510060 SOWAHBA6NEL2 793 aa12.6□□□□□ -0.39
SSBP2-214ENST00000510060 GPR37O15354 613 aa12.6□□□□□ -0.39
SSBP2-214ENST00000510060 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.59□□□□□ -0.39
SSBP2-214ENST00000510060 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
SSBP2-214ENST00000510060 ADGRG1Q9Y653 693 aa12.58□□□□□ -0.4
SSBP2-214ENST00000510060 OATP04181 439 aa12.57□□□□□ -0.4
SSBP2-214ENST00000510060 SLC4A3P48751 1232 aa12.57□□□□□ -0.4
SSBP2-214ENST00000510060 EYA1Q99502 592 aa12.57□□□□□ -0.4
SSBP2-214ENST00000510060 PTPN5P54829 565 aa12.56□□□□□ -0.4
SSBP2-214ENST00000510060 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
SSBP2-214ENST00000510060 NYAP1Q6ZVC0 841 aa12.55□□□□□ -0.4
SSBP2-214ENST00000510060 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
SSBP2-214ENST00000510060 BCAMP50895 628 aa12.54□□□□□ -0.4
SSBP2-214ENST00000510060 BCANQ96GW7 911 aa12.54□□□□□ -0.4
SSBP2-214ENST00000510060 DNAJB2P25686 324 aa12.53□□□□□ -0.4
SSBP2-214ENST00000510060 SAMD7Q7Z3H4 446 aa12.53□□□□□ -0.4
SSBP2-214ENST00000510060 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
SSBP2-214ENST00000510060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.51□□□□□ -0.41
SSBP2-214ENST00000510060 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
SSBP2-214ENST00000510060 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
SSBP2-214ENST00000510060 FECHP22830 423 aa12.49□□□□□ -0.41
SSBP2-214ENST00000510060 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
SSBP2-214ENST00000510060 PXYLP1Q8TE99 480 aa12.49□□□□□ -0.41
SSBP2-214ENST00000510060 RCCD1A6NED2 376 aa12.48□□□□□ -0.41
SSBP2-214ENST00000510060 PPP4CP60510 307 aa12.48□□□□□ -0.41
SSBP2-214ENST00000510060 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
SSBP2-214ENST00000510060 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
SSBP2-214ENST00000510060 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
SSBP2-214ENST00000510060 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms