RNA–Protein interactions for RNA: ENST00000509602.1

CAST-227, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-227ENST00000509602 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
CAST-227ENST00000509602 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
CAST-227ENST00000509602 E2F4Q16254 413 aa12.58□□□□□ -0.4
CAST-227ENST00000509602 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
CAST-227ENST00000509602 DDX12PQ92771 950 aa12.54□□□□□ -0.4
CAST-227ENST00000509602 PDIA6Q15084 440 aa12.53□□□□□ -0.4
CAST-227ENST00000509602 NBR1Q14596 966 aa12.51□□□□□ -0.41
CAST-227ENST00000509602 WNT2BQ93097 391 aa12.51□□□□□ -0.41
CAST-227ENST00000509602 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
CAST-227ENST00000509602 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
CAST-227ENST00000509602 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
CAST-227ENST00000509602 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
CAST-227ENST00000509602 PTPN5P54829 565 aa12.5□□□□□ -0.41
CAST-227ENST00000509602 C6orf132Q5T0Z8 1188 aa12.5□□□□□ -0.41
CAST-227ENST00000509602 MAP3K7O43318 606 aa12.48□□□□□ -0.41
CAST-227ENST00000509602 COL9A1P20849 921 aa12.47□□□□□ -0.41
CAST-227ENST00000509602 PROX2Q3B8N5 592 aa12.47□□□□□ -0.41
CAST-227ENST00000509602 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
CAST-227ENST00000509602 ANKK1Q8NFD2 765 aa12.45□□□□□ -0.42
CAST-227ENST00000509602 EN1Q05925 392 aaPredicted RBP12.44□□□□□ -0.42
CAST-227ENST00000509602 ARIH1Q9Y4X5 557 aaPredicted RBP12.44□□□□□ -0.42
CAST-227ENST00000509602 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
CAST-227ENST00000509602 LAPTM4BQ86VI4 370 aa12.43□□□□□ -0.42
CAST-227ENST00000509602 KIAA1468Q9P260 1216 aa12.42□□□□□ -0.42
CAST-227ENST00000509602 GRXCR2A6NFK2 248 aa12.41□□□□□ -0.42
CAST-227ENST00000509602 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
CAST-227ENST00000509602 PACS2Q86VP3 889 aa12.38□□□□□ -0.43
CAST-227ENST00000509602 CERKQ8TCT0 537 aa12.38□□□□□ -0.43
CAST-227ENST00000509602 TSR1Q2NL82 804 aaKnown RBP12.35□□□□□ -0.43
CAST-227ENST00000509602 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
CAST-227ENST00000509602 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
CAST-227ENST00000509602 ZFRQ96KR1 1074 aaKnown RBP12.34□□□□□ -0.43
CAST-227ENST00000509602 SEPT9Q9UHD8 586 aaPredicted RBP12.34□□□□□ -0.43
CAST-227ENST00000509602 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
CAST-227ENST00000509602 SOWAHBA6NEL2 793 aa12.3□□□□□ -0.44
CAST-227ENST00000509602 BCAMP50895 628 aa12.3□□□□□ -0.44
CAST-227ENST00000509602 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
CAST-227ENST00000509602 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
CAST-227ENST00000509602 PRSS12P56730 875 aa12.29□□□□□ -0.44
CAST-227ENST00000509602 P3H3Q8IVL6 736 aa12.29□□□□□ -0.44
CAST-227ENST00000509602 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
CAST-227ENST00000509602 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
CAST-227ENST00000509602 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
CAST-227ENST00000509602 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
CAST-227ENST00000509602 OSBPP22059 807 aa12.25□□□□□ -0.45
CAST-227ENST00000509602 HDGFP51858 240 aaKnown RBP12.24□□□□□ -0.45
CAST-227ENST00000509602 IFFO2Q5TF58 517 aa12.23□□□□□ -0.45
CAST-227ENST00000509602 KCNV2Q8TDN2 545 aa12.23□□□□□ -0.45
CAST-227ENST00000509602 RBM27Q9P2N5 1060 aaKnown RBP12.23□□□□□ -0.45
CAST-227ENST00000509602 TSR3Q9UJK0 312 aaKnown RBP12.23□□□□□ -0.45
CAST-227ENST00000509602 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
CAST-227ENST00000509602 PNMA3Q9UL41 463 aa12.21□□□□□ -0.45
CAST-227ENST00000509602 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
CAST-227ENST00000509602 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
CAST-227ENST00000509602 WBP1LQ9NX94 342 aa12.2□□□□□ -0.46
CAST-227ENST00000509602 TATDN2Q93075 761 aa12.19□□□□□ -0.46
CAST-227ENST00000509602 PPP4CP60510 307 aa12.18□□□□□ -0.46
CAST-227ENST00000509602 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
CAST-227ENST00000509602 SMAPO00193 183 aa12.17□□□□□ -0.46
CAST-227ENST00000509602 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
CAST-227ENST00000509602 RNF40O75150 1001 aa12.15□□□□□ -0.46
CAST-227ENST00000509602 NUDT18Q6ZVK8 323 aa12.15□□□□□ -0.46
CAST-227ENST00000509602 SAMD7Q7Z3H4 446 aa12.15□□□□□ -0.46
CAST-227ENST00000509602 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
CAST-227ENST00000509602 A0A0G2JS52 829 aa12.14□□□□□ -0.47
CAST-227ENST00000509602 RGS20O76081 388 aa12.14□□□□□ -0.47
CAST-227ENST00000509602 ITGBL1O95965 494 aaPredicted RBP12.14□□□□□ -0.47
CAST-227ENST00000509602 KCNC4Q03721 635 aa12.14□□□□□ -0.47
CAST-227ENST00000509602 MLLT3P42568 568 aaPredicted RBP12.13□□□□□ -0.47
CAST-227ENST00000509602 FAM198AQ9UFP1 575 aa12.13□□□□□ -0.47
CAST-227ENST00000509602 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
CAST-227ENST00000509602 NUTM2FA1L443 756 aa12.09□□□□□ -0.47
CAST-227ENST00000509602 SLF2Q8IX21 1173 aa12.07□□□□□ -0.48
CAST-227ENST00000509602 NPDC1Q9NQX5 325 aaPredicted RBP12.07□□□□□ -0.48
CAST-227ENST00000509602 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
CAST-227ENST00000509602 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
CAST-227ENST00000509602 SMYD5Q6GMV2 418 aa12.05□□□□□ -0.48
CAST-227ENST00000509602 C3orf80F5H4A9 247 aa12.03□□□□□ -0.48
CAST-227ENST00000509602 PTGDRQ13258 359 aa12.03□□□□□ -0.48
CAST-227ENST00000509602 RBM46Q8TBY0 533 aaKnown RBP12.03□□□□□ -0.48
CAST-227ENST00000509602 SEMA3EO15041 775 aa12.02□□□□□ -0.49
CAST-227ENST00000509602 FCHSD2O94868 740 aa12.01□□□□□ -0.49
CAST-227ENST00000509602 SWT1Q5T5J6 900 aaKnown RBP12.01□□□□□ -0.49
CAST-227ENST00000509602 PRR14Q9BWN1 585 aa12□□□□□ -0.49
CAST-227ENST00000509602 IL21Q9HBE4 155 aa11.99□□□□□ -0.49
CAST-227ENST00000509602 DNAJB2P25686 324 aa11.98□□□□□ -0.49
CAST-227ENST00000509602 EYA1Q99502 592 aa11.97□□□□□ -0.49
CAST-227ENST00000509602 IRX2Q9BZI1 471 aaPredicted RBP11.97□□□□□ -0.49
CAST-227ENST00000509602 MTRQ99707 1265 aa11.96□□□□□ -0.49
CAST-227ENST00000509602 TJAP1Q5JTD0 557 aa11.94□□□□□ -0.5
CAST-227ENST00000509602 ADGRG1Q9Y653 693 aa11.93□□□□□ -0.5
CAST-227ENST00000509602 APLP1P51693 650 aa11.92□□□□□ -0.5
CAST-227ENST00000509602 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
CAST-227ENST00000509602 HIC1Q14526 733 aa11.91□□□□□ -0.5
CAST-227ENST00000509602 OATP04181 439 aa11.9□□□□□ -0.5
CAST-227ENST00000509602 TMEM134Q9H6X4 195 aa11.9□□□□□ -0.5
CAST-227ENST00000509602 GGCXP38435 758 aa11.89□□□□□ -0.51
CAST-227ENST00000509602 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
CAST-227ENST00000509602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.88□□□□□ -0.51
CAST-227ENST00000509602 RCCD1A6NED2 376 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms