RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
LINC01088-205ENST00000509088 PDIA6Q15084 440 aa13.18□□□□□ -0.3
LINC01088-205ENST00000509088 THSD4Q6ZMP0 1018 aa13.18□□□□□ -0.3
LINC01088-205ENST00000509088 EPAS1Q99814 870 aa13.18□□□□□ -0.3
LINC01088-205ENST00000509088 MRPL50Q8N5N7 158 aaKnown RBP13.17□□□□□ -0.3
LINC01088-205ENST00000509088 DDX12PQ92771 950 aa13.17□□□□□ -0.3
LINC01088-205ENST00000509088 C6orf132Q5T0Z8 1188 aa13.16□□□□□ -0.3
LINC01088-205ENST00000509088 PTPN5P54829 565 aa13.15□□□□□ -0.3
LINC01088-205ENST00000509088 RABGEF1Q9UJ41 708 aa13.15□□□□□ -0.3
LINC01088-205ENST00000509088 NBPF3Q9H094 633 aa13.13□□□□□ -0.31
LINC01088-205ENST00000509088 WNT2BQ93097 391 aa13.12□□□□□ -0.31
LINC01088-205ENST00000509088 ARIH1Q9Y4X5 557 aaPredicted RBP13.12□□□□□ -0.31
LINC01088-205ENST00000509088 E2F4Q16254 413 aa13.11□□□□□ -0.31
LINC01088-205ENST00000509088 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
LINC01088-205ENST00000509088 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
LINC01088-205ENST00000509088 EN1Q05925 392 aaPredicted RBP13.09□□□□□ -0.31
LINC01088-205ENST00000509088 NBR1Q14596 966 aa13.08□□□□□ -0.32
LINC01088-205ENST00000509088 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.32
LINC01088-205ENST00000509088 KIAA1468Q9P260 1216 aa13.08□□□□□ -0.32
LINC01088-205ENST00000509088 GOLGA8CPA6NN73 597 aa13.07□□□□□ -0.32
LINC01088-205ENST00000509088 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
LINC01088-205ENST00000509088 ONECUT3O60422 494 aaPredicted RBP13.06□□□□□ -0.32
LINC01088-205ENST00000509088 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
LINC01088-205ENST00000509088 LAPTM4BQ86VI4 370 aa13.03□□□□□ -0.32
LINC01088-205ENST00000509088 SEPT9Q9UHD8 586 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-205ENST00000509088 MAP3K7O43318 606 aa13.01□□□□□ -0.33
LINC01088-205ENST00000509088 BCAMP50895 628 aa13.01□□□□□ -0.33
LINC01088-205ENST00000509088 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
LINC01088-205ENST00000509088 ANKK1Q8NFD2 765 aa13□□□□□ -0.33
LINC01088-205ENST00000509088 ZFRQ96KR1 1074 aaKnown RBP13□□□□□ -0.33
LINC01088-205ENST00000509088 WDR70Q9NW82 654 aa13□□□□□ -0.33
LINC01088-205ENST00000509088 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
LINC01088-205ENST00000509088 SOWAHBA6NEL2 793 aa12.98□□□□□ -0.33
LINC01088-205ENST00000509088 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
LINC01088-205ENST00000509088 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
LINC01088-205ENST00000509088 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
LINC01088-205ENST00000509088 OSBPP22059 807 aa12.96□□□□□ -0.33
LINC01088-205ENST00000509088 C3orf80F5H4A9 247 aa12.95□□□□□ -0.34
LINC01088-205ENST00000509088 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
LINC01088-205ENST00000509088 CDHR5Q9HBB8 845 aa12.94□□□□□ -0.34
LINC01088-205ENST00000509088 CDCA7LQ96GN5 454 aa12.92□□□□□ -0.34
LINC01088-205ENST00000509088 WBP1LQ9NX94 342 aa12.91□□□□□ -0.34
LINC01088-205ENST00000509088 PRSS12P56730 875 aa12.9□□□□□ -0.34
LINC01088-205ENST00000509088 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
LINC01088-205ENST00000509088 A0A0G2JS52 829 aa12.88□□□□□ -0.35
LINC01088-205ENST00000509088 SMAPO00193 183 aa12.88□□□□□ -0.35
LINC01088-205ENST00000509088 PACS2Q86VP3 889 aa12.87□□□□□ -0.35
LINC01088-205ENST00000509088 CERKQ8TCT0 537 aa12.86□□□□□ -0.35
LINC01088-205ENST00000509088 KCNV2Q8TDN2 545 aa12.86□□□□□ -0.35
LINC01088-205ENST00000509088 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
LINC01088-205ENST00000509088 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.85□□□□□ -0.35
LINC01088-205ENST00000509088 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
LINC01088-205ENST00000509088 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
LINC01088-205ENST00000509088 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
LINC01088-205ENST00000509088 MLLT3P42568 568 aaPredicted RBP12.82□□□□□ -0.36
LINC01088-205ENST00000509088 TTC13Q8NBP0 860 aa12.82□□□□□ -0.36
LINC01088-205ENST00000509088 TSR3Q9UJK0 312 aaKnown RBP12.82□□□□□ -0.36
LINC01088-205ENST00000509088 TATDN2Q93075 761 aa12.81□□□□□ -0.36
LINC01088-205ENST00000509088 RBM27Q9P2N5 1060 aaKnown RBP12.81□□□□□ -0.36
LINC01088-205ENST00000509088 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
LINC01088-205ENST00000509088 ARHGEF1Q92888 912 aaKnown RBP12.8□□□□□ -0.36
LINC01088-205ENST00000509088 PNMA3Q9UL41 463 aa12.79□□□□□ -0.36
LINC01088-205ENST00000509088 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
LINC01088-205ENST00000509088 RGS20O76081 388 aa12.77□□□□□ -0.37
LINC01088-205ENST00000509088 NUDT18Q6ZVK8 323 aa12.76□□□□□ -0.37
LINC01088-205ENST00000509088 PADI6Q6TGC4 694 aa12.75□□□□□ -0.37
LINC01088-205ENST00000509088 PPP4CP60510 307 aa12.71□□□□□ -0.37
LINC01088-205ENST00000509088 KCNC4Q03721 635 aa12.71□□□□□ -0.37
LINC01088-205ENST00000509088 TJAP1Q5JTD0 557 aa12.69□□□□□ -0.38
LINC01088-205ENST00000509088 EYA1Q99502 592 aa12.67□□□□□ -0.38
LINC01088-205ENST00000509088 PTGDRQ13258 359 aa12.66□□□□□ -0.38
LINC01088-205ENST00000509088 SWT1Q5T5J6 900 aaKnown RBP12.64□□□□□ -0.39
LINC01088-205ENST00000509088 APLP1P51693 650 aa12.63□□□□□ -0.39
LINC01088-205ENST00000509088 SEMA3EO15041 775 aa12.62□□□□□ -0.39
LINC01088-205ENST00000509088 MTRQ99707 1265 aa12.62□□□□□ -0.39
LINC01088-205ENST00000509088 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
LINC01088-205ENST00000509088 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
LINC01088-205ENST00000509088 RNF40O75150 1001 aa12.59□□□□□ -0.39
LINC01088-205ENST00000509088 ZNF516Q92618 1163 aa12.58□□□□□ -0.4
LINC01088-205ENST00000509088 IRX2Q9BZI1 471 aaPredicted RBP12.58□□□□□ -0.4
LINC01088-205ENST00000509088 IL21Q9HBE4 155 aa12.56□□□□□ -0.4
LINC01088-205ENST00000509088 ADGRG1Q9Y653 693 aa12.56□□□□□ -0.4
LINC01088-205ENST00000509088 FAM161AQ3B820 660 aa12.55□□□□□ -0.4
LINC01088-205ENST00000509088 HDGFP51858 240 aaKnown RBP12.54□□□□□ -0.4
LINC01088-205ENST00000509088 SLF2Q8IX21 1173 aa12.54□□□□□ -0.4
LINC01088-205ENST00000509088 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
LINC01088-205ENST00000509088 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
LINC01088-205ENST00000509088 NKX2-3Q8TAU0 364 aa12.51□□□□□ -0.41
LINC01088-205ENST00000509088 TMEM134Q9H6X4 195 aa12.51□□□□□ -0.41
LINC01088-205ENST00000509088 DNAJB2P25686 324 aa12.5□□□□□ -0.41
LINC01088-205ENST00000509088 PPP1R18Q6NYC8 613 aa12.49□□□□□ -0.41
LINC01088-205ENST00000509088 FCHSD2O94868 740 aa12.48□□□□□ -0.41
LINC01088-205ENST00000509088 RCCD1A6NED2 376 aa12.47□□□□□ -0.41
LINC01088-205ENST00000509088 COPS2P61201 443 aa12.47□□□□□ -0.41
LINC01088-205ENST00000509088 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
LINC01088-205ENST00000509088 NECTIN2Q92692 538 aa12.47□□□□□ -0.41
LINC01088-205ENST00000509088 GPR37O15354 613 aa12.46□□□□□ -0.41
LINC01088-205ENST00000509088 RBM26Q5T8P6 1007 aaKnown RBP12.46□□□□□ -0.41
LINC01088-205ENST00000509088 PXYLP1Q8TE99 480 aa12.43□□□□□ -0.42
LINC01088-205ENST00000509088 FECHP22830 423 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms