RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 CCDC180Q9P1Z9 1646 aa7.58□□□□□ -1.2
UBE2D3-226ENST00000508635 TBC1D12O60347 775 aa7.57□□□□□ -1.2
UBE2D3-226ENST00000508635 GFRA3O60609 400 aa7.57□□□□□ -1.2
UBE2D3-226ENST00000508635 MRPL50Q8N5N7 158 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-226ENST00000508635 LCE2BO14633 110 aa7.56□□□□□ -1.2
UBE2D3-226ENST00000508635 UPF1Q92900 1129 aaKnown RBP eCLIP7.56□□□□□ -1.2
UBE2D3-226ENST00000508635 NYAP1Q6ZVC0 841 aa7.55□□□□□ -1.2
UBE2D3-226ENST00000508635 KCNV2Q8TDN2 545 aa7.55□□□□□ -1.2
UBE2D3-226ENST00000508635 ZNF787Q6DD87 383 aa7.54□□□□□ -1.2
UBE2D3-226ENST00000508635 NBPF3Q9H094 633 aa7.54□□□□□ -1.2
UBE2D3-226ENST00000508635 EMILIN3Q9NT22 766 aa7.54□□□□□ -1.2
UBE2D3-226ENST00000508635 ABCC9O60706 1549 aa7.53□□□□□ -1.2
UBE2D3-226ENST00000508635 CAMK2BQ13554 666 aa7.53□□□□□ -1.2
UBE2D3-226ENST00000508635 OXER1Q8TDS5 423 aa7.53□□□□□ -1.2
UBE2D3-226ENST00000508635 NRG2O14511 850 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-226ENST00000508635 DPYSL4O14531 572 aa7.51□□□□□ -1.21
UBE2D3-226ENST00000508635 KCNC4Q03721 635 aa7.51□□□□□ -1.21
UBE2D3-226ENST00000508635 P3H3Q8IVL6 736 aa7.51□□□□□ -1.21
UBE2D3-226ENST00000508635 BCL2L12Q9HB09 334 aa7.51□□□□□ -1.21
UBE2D3-226ENST00000508635 MAP3K9P80192 1104 aa7.49□□□□□ -1.21
UBE2D3-226ENST00000508635 ZNF775Q96BV0 537 aaPredicted RBP7.49□□□□□ -1.21
UBE2D3-226ENST00000508635 PTPREP23469 700 aa7.48□□□□□ -1.21
UBE2D3-226ENST00000508635 ANKK1Q8NFD2 765 aa7.47□□□□□ -1.21
UBE2D3-226ENST00000508635 ARHGEF1Q92888 912 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-226ENST00000508635 ZBED2Q9BTP6 218 aa7.47□□□□□ -1.21
UBE2D3-226ENST00000508635 ANO8Q9HCE9 1232 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-226ENST00000508635 EVI5O60447 810 aa7.43□□□□□ -1.22
UBE2D3-226ENST00000508635 NBR1Q14596 966 aa7.43□□□□□ -1.22
UBE2D3-226ENST00000508635 ZNF454Q8N9F8 522 aa7.43□□□□□ -1.22
UBE2D3-226ENST00000508635 ARIH1Q9Y4X5 557 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-226ENST00000508635 SEMA3EO15041 775 aa7.42□□□□□ -1.22
UBE2D3-226ENST00000508635 FOSBP53539 338 aa7.42□□□□□ -1.22
UBE2D3-226ENST00000508635 PDIA6Q15084 440 aa7.41□□□□□ -1.22
UBE2D3-226ENST00000508635 SOWAHBA6NEL2 793 aa7.39□□□□□ -1.23
UBE2D3-226ENST00000508635 SPDYE16A6NNV3 312 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-226ENST00000508635 LAPTM4BQ86VI4 370 aa7.39□□□□□ -1.23
UBE2D3-226ENST00000508635 DDX12PQ92771 950 aa7.39□□□□□ -1.23
UBE2D3-226ENST00000508635 BCANQ96GW7 911 aa7.39□□□□□ -1.23
UBE2D3-226ENST00000508635 V9GY48 417 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-226ENST00000508635 GRXCR2A6NFK2 248 aa7.38□□□□□ -1.23
UBE2D3-226ENST00000508635 MLLT3P42568 568 aaPredicted RBP7.38□□□□□ -1.23
UBE2D3-226ENST00000508635 ADAM33Q9BZ11 813 aa7.38□□□□□ -1.23
UBE2D3-226ENST00000508635 RABGEF1Q9UJ41 708 aa7.38□□□□□ -1.23
UBE2D3-226ENST00000508635 PRKD2Q9BZL6 878 aa7.37□□□□□ -1.23
UBE2D3-226ENST00000508635 TESPA1A2RU30 521 aaPredicted RBP7.34□□□□□ -1.23
UBE2D3-226ENST00000508635 BCAMP50895 628 aa7.34□□□□□ -1.23
UBE2D3-226ENST00000508635 JPH4Q96JJ6 628 aa7.34□□□□□ -1.23
UBE2D3-226ENST00000508635 PCDHGA10Q9Y5H3 936 aa7.34□□□□□ -1.23
UBE2D3-226ENST00000508635 COL9A1P20849 921 aa7.32□□□□□ -1.24
UBE2D3-226ENST00000508635 ZDHHC16Q969W1 377 aa7.32□□□□□ -1.24
UBE2D3-226ENST00000508635 WBP1LQ9NX94 342 aa7.32□□□□□ -1.24
UBE2D3-226ENST00000508635 PDZRN3Q9UPQ7 1066 aa7.32□□□□□ -1.24
UBE2D3-226ENST00000508635 RBM33Q96EV2 1170 aaKnown RBP7.31□□□□□ -1.24
UBE2D3-226ENST00000508635 PPP1R3GB7ZBB8 358 aa7.3□□□□□ -1.24
UBE2D3-226ENST00000508635 PHF14O94880 888 aa7.3□□□□□ -1.24
UBE2D3-226ENST00000508635 SMYD5Q6GMV2 418 aa7.3□□□□□ -1.24
UBE2D3-226ENST00000508635 TULP1O00294 542 aaPredicted RBP7.29□□□□□ -1.24
UBE2D3-226ENST00000508635 OSBPP22059 807 aa7.29□□□□□ -1.24
UBE2D3-226ENST00000508635 PRIM1P49642 420 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-226ENST00000508635 RBM26Q5T8P6 1007 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-226ENST00000508635 TYW1BQ6NUM6 668 aa7.29□□□□□ -1.24
UBE2D3-226ENST00000508635 TREML4Q6UXN2 200 aa7.29□□□□□ -1.24
UBE2D3-226ENST00000508635 ZFRQ96KR1 1074 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-226ENST00000508635 PROX2Q3B8N5 592 aa7.28□□□□□ -1.24
UBE2D3-226ENST00000508635 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.28□□□□□ -1.24
UBE2D3-226ENST00000508635 EPAS1Q99814 870 aa7.28□□□□□ -1.24
UBE2D3-226ENST00000508635 STK17AQ9UEE5 414 aa7.28□□□□□ -1.24
UBE2D3-226ENST00000508635 TSR3Q9UJK0 312 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-226ENST00000508635 MAP3K7O43318 606 aa7.27□□□□□ -1.25
UBE2D3-226ENST00000508635 ONECUT3O60422 494 aaPredicted RBP7.26□□□□□ -1.25
UBE2D3-226ENST00000508635 LMOD2Q6P5Q4 547 aa7.26□□□□□ -1.25
UBE2D3-226ENST00000508635 NUTM2FA1L443 756 aa7.25□□□□□ -1.25
UBE2D3-226ENST00000508635 EN1Q05925 392 aaPredicted RBP7.25□□□□□ -1.25
UBE2D3-226ENST00000508635 TSR1Q2NL82 804 aaKnown RBP7.25□□□□□ -1.25
UBE2D3-226ENST00000508635 FBXW7Q969H0 707 aa7.25□□□□□ -1.25
UBE2D3-226ENST00000508635 C6orf132Q5T0Z8 1188 aa7.23□□□□□ -1.25
UBE2D3-226ENST00000508635 CDHR5Q9HBB8 845 aa7.23□□□□□ -1.25
UBE2D3-226ENST00000508635 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-226ENST00000508635 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
UBE2D3-226ENST00000508635 PPP1R18Q6NYC8 613 aa7.22□□□□□ -1.25
UBE2D3-226ENST00000508635 GPIHBP1Q8IV16 184 aa7.21□□□□□ -1.26
UBE2D3-226ENST00000508635 LRCH3Q96II8 777 aa7.21□□□□□ -1.26
UBE2D3-226ENST00000508635 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-226ENST00000508635 HPS5Q9UPZ3 1129 aa7.21□□□□□ -1.26
UBE2D3-226ENST00000508635 C3orf80F5H4A9 247 aa7.2□□□□□ -1.26
UBE2D3-226ENST00000508635 DGAT1O75907 488 aa7.2□□□□□ -1.26
UBE2D3-226ENST00000508635 FAM98CQ17RN3 349 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-226ENST00000508635 KIAA1468Q9P260 1216 aa7.2□□□□□ -1.26
UBE2D3-226ENST00000508635 RB1CC1Q8TDY2 1594 aa7.2□□□□□ -1.26
UBE2D3-226ENST00000508635 PKDCCQ504Y2 493 aa7.19□□□□□ -1.26
UBE2D3-226ENST00000508635 TJAP1Q5JTD0 557 aa7.19□□□□□ -1.26
UBE2D3-226ENST00000508635 INSM1Q01101 510 aaPredicted RBP7.18□□□□□ -1.26
UBE2D3-226ENST00000508635 IL21Q9HBE4 155 aa7.18□□□□□ -1.26
UBE2D3-226ENST00000508635 NPDC1Q9NQX5 325 aaPredicted RBP7.18□□□□□ -1.26
UBE2D3-226ENST00000508635 GGCXP38435 758 aa7.17□□□□□ -1.26
UBE2D3-226ENST00000508635 MYT1Q01538 1121 aa7.17□□□□□ -1.26
UBE2D3-226ENST00000508635 TPRNQ4KMQ1 711 aa7.17□□□□□ -1.26
UBE2D3-226ENST00000508635 ZC3H15Q8WU90 426 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-226ENST00000508635 FAM198AQ9UFP1 575 aa7.17□□□□□ -1.26
UBE2D3-226ENST00000508635 NACADO15069 1562 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms