RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 TK2O00142 265 aa4.01□□□□□ -1.77
SMN2-208ENST00000508258 CAMK2BQ13554 666 aa4.01□□□□□ -1.77
SMN2-208ENST00000508258 PHF14O94880 888 aa4□□□□□ -1.77
SMN2-208ENST00000508258 TYW1BQ6NUM6 668 aa4□□□□□ -1.77
SMN2-208ENST00000508258 FBXW7Q969H0 707 aa4□□□□□ -1.77
SMN2-208ENST00000508258 KCTD12Q96CX2 325 aaKnown RBP4□□□□□ -1.77
SMN2-208ENST00000508258 GRXCR2A6NFK2 248 aa3.99□□□□□ -1.77
SMN2-208ENST00000508258 MAP3K7O43318 606 aa3.99□□□□□ -1.77
SMN2-208ENST00000508258 MRPL50Q8N5N7 158 aaKnown RBP3.99□□□□□ -1.77
SMN2-208ENST00000508258 EPAS1Q99814 870 aa3.99□□□□□ -1.77
SMN2-208ENST00000508258 VPS9D1Q9Y2B5 631 aa3.99□□□□□ -1.77
SMN2-208ENST00000508258 SPDYE16A6NNV3 312 aaPredicted RBP3.98□□□□□ -1.77
SMN2-208ENST00000508258 PPP1R3GB7ZBB8 358 aa3.98□□□□□ -1.77
SMN2-208ENST00000508258 PTPN5P54829 565 aa3.98□□□□□ -1.77
SMN2-208ENST00000508258 PDIA6Q15084 440 aa3.98□□□□□ -1.77
SMN2-208ENST00000508258 ZBED2Q9BTP6 218 aa3.98□□□□□ -1.77
SMN2-208ENST00000508258 NBPF3Q9H094 633 aa3.98□□□□□ -1.77
SMN2-208ENST00000508258 HRO43593 1189 aa3.97□□□□□ -1.77
SMN2-208ENST00000508258 COL9A1P20849 921 aa3.97□□□□□ -1.77
SMN2-208ENST00000508258 PROX2Q3B8N5 592 aa3.97□□□□□ -1.77
SMN2-208ENST00000508258 C6orf132Q5T0Z8 1188 aa3.97□□□□□ -1.77
SMN2-208ENST00000508258 HCSTQ9UBK5 93 aa3.97□□□□□ -1.77
SMN2-208ENST00000508258 P3H3Q8IVL6 736 aa3.96□□□□□ -1.78
SMN2-208ENST00000508258 WNT2BQ93097 391 aa3.96□□□□□ -1.78
SMN2-208ENST00000508258 EN1Q05925 392 aaPredicted RBP3.95□□□□□ -1.78
SMN2-208ENST00000508258 TSR1Q2NL82 804 aaKnown RBP3.95□□□□□ -1.78
SMN2-208ENST00000508258 SLC4A5Q9BY07 1137 aa3.95□□□□□ -1.78
SMN2-208ENST00000508258 KIAA1468Q9P260 1216 aa3.95□□□□□ -1.78
SMN2-208ENST00000508258 ANKK1Q8NFD2 765 aa3.94□□□□□ -1.78
SMN2-208ENST00000508258 SEPT9Q9UHD8 586 aaPredicted RBP3.94□□□□□ -1.78
SMN2-208ENST00000508258 RABGEF1Q9UJ41 708 aa3.94□□□□□ -1.78
SMN2-208ENST00000508258 BHMG1C9JSJ3 638 aaPredicted RBP3.93□□□□□ -1.78
SMN2-208ENST00000508258 KCNV2Q8TDN2 545 aa3.93□□□□□ -1.78
SMN2-208ENST00000508258 PLA2G2EQ9NZK7 142 aa3.93□□□□□ -1.78
SMN2-208ENST00000508258 ARIH1Q9Y4X5 557 aaPredicted RBP3.93□□□□□ -1.78
SMN2-208ENST00000508258 TRIM6-TRIM34B2RNG4 842 aa3.92□□□□□ -1.78
SMN2-208ENST00000508258 THSD4Q6ZMP0 1018 aa3.92□□□□□ -1.78
SMN2-208ENST00000508258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMN2-208ENST00000508258 PACS2Q86VP3 889 aa3.92□□□□□ -1.78
SMN2-208ENST00000508258 ARHGEF1Q92888 912 aaKnown RBP3.92□□□□□ -1.78
SMN2-208ENST00000508258 RNF40O75150 1001 aa3.91□□□□□ -1.78
SMN2-208ENST00000508258 OSBPP22059 807 aa3.91□□□□□ -1.78
SMN2-208ENST00000508258 BCAMP50895 628 aa3.91□□□□□ -1.78
SMN2-208ENST00000508258 CDCA7LQ96GN5 454 aa3.91□□□□□ -1.78
SMN2-208ENST00000508258 ZFRQ96KR1 1074 aaKnown RBP3.91□□□□□ -1.78
SMN2-208ENST00000508258 CDHR5Q9HBB8 845 aa3.91□□□□□ -1.78
SMN2-208ENST00000508258 SMAPO00193 183 aa3.9□□□□□ -1.79
SMN2-208ENST00000508258 MLLT3P42568 568 aaPredicted RBP3.9□□□□□ -1.79
SMN2-208ENST00000508258 PRIM1P49642 420 aaKnown RBP3.9□□□□□ -1.79
SMN2-208ENST00000508258 PRSS12P56730 875 aa3.9□□□□□ -1.79
SMN2-208ENST00000508258 FAM98CQ17RN3 349 aaKnown RBP3.9□□□□□ -1.79
SMN2-208ENST00000508258 LAPTM4BQ86VI4 370 aa3.9□□□□□ -1.79
SMN2-208ENST00000508258 CERKQ8TCT0 537 aa3.9□□□□□ -1.79
SMN2-208ENST00000508258 LRCH3Q96II8 777 aa3.9□□□□□ -1.79
SMN2-208ENST00000508258 TSKSQ9UJT2 592 aa3.9□□□□□ -1.79
SMN2-208ENST00000508258 NUTM2FA1L443 756 aa3.89□□□□□ -1.79
SMN2-208ENST00000508258 NBPF26B4DH59 902 aa3.89□□□□□ -1.79
SMN2-208ENST00000508258 ONECUT3O60422 494 aaPredicted RBP3.89□□□□□ -1.79
SMN2-208ENST00000508258 HDGFP51858 240 aaKnown RBP3.89□□□□□ -1.79
SMN2-208ENST00000508258 LMOD2Q6P5Q4 547 aa3.89□□□□□ -1.79
SMN2-208ENST00000508258 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.89□□□□□ -1.79
SMN2-208ENST00000508258 PNMA3Q9UL41 463 aa3.89□□□□□ -1.79
SMN2-208ENST00000508258 SOWAHBA6NEL2 793 aa3.88□□□□□ -1.79
SMN2-208ENST00000508258 SEMA3EO15041 775 aa3.88□□□□□ -1.79
SMN2-208ENST00000508258 NUDT18Q6ZVK8 323 aa3.88□□□□□ -1.79
SMN2-208ENST00000508258 HPS5Q9UPZ3 1129 aa3.88□□□□□ -1.79
SMN2-208ENST00000508258 TMEM132AQ24JP5 1023 aa3.87□□□□□ -1.79
SMN2-208ENST00000508258 PADI6Q6TGC4 694 aa3.87□□□□□ -1.79
SMN2-208ENST00000508258 TATDN2Q93075 761 aa3.87□□□□□ -1.79
SMN2-208ENST00000508258 WBP1LQ9NX94 342 aa3.87□□□□□ -1.79
SMN2-208ENST00000508258 TESPA1A2RU30 521 aaPredicted RBP3.86□□□□□ -1.79
SMN2-208ENST00000508258 PPP4CP60510 307 aa3.86□□□□□ -1.79
SMN2-208ENST00000508258 SAMD7Q7Z3H4 446 aa3.86□□□□□ -1.79
SMN2-208ENST00000508258 FAM198AQ9UFP1 575 aa3.86□□□□□ -1.79
SMN2-208ENST00000508258 TSR3Q9UJK0 312 aaKnown RBP3.86□□□□□ -1.79
SMN2-208ENST00000508258 GTF3C3Q9Y5Q9 886 aa3.86□□□□□ -1.79
SMN2-208ENST00000508258 C3orf80F5H4A9 247 aa3.85□□□□□ -1.79
SMN2-208ENST00000508258 SLC4A3P48751 1232 aa3.85□□□□□ -1.79
SMN2-208ENST00000508258 SMYD5Q6GMV2 418 aa3.85□□□□□ -1.79
SMN2-208ENST00000508258 RBM27Q9P2N5 1060 aaKnown RBP3.85□□□□□ -1.79
SMN2-208ENST00000508258 FCHSD2O94868 740 aa3.84□□□□□ -1.79
SMN2-208ENST00000508258 RBM26Q5T8P6 1007 aaKnown RBP3.84□□□□□ -1.79
SMN2-208ENST00000508258 NYAP1Q6ZVC0 841 aa3.84□□□□□ -1.79
SMN2-208ENST00000508258 ZC3H15Q8WU90 426 aaKnown RBP3.84□□□□□ -1.79
SMN2-208ENST00000508258 NPDC1Q9NQX5 325 aaPredicted RBP3.84□□□□□ -1.79
SMN2-208ENST00000508258 TIMELESSQ9UNS1 1208 aa3.84□□□□□ -1.79
SMN2-208ENST00000508258 TULP1O00294 542 aaPredicted RBP3.83□□□□□ -1.8
SMN2-208ENST00000508258 PTGDRQ13258 359 aa3.83□□□□□ -1.8
SMN2-208ENST00000508258 FAM161AQ3B820 660 aa3.83□□□□□ -1.8
SMN2-208ENST00000508258 SWT1Q5T5J6 900 aaKnown RBP3.83□□□□□ -1.8
SMN2-208ENST00000508258 BRPF1P55201 1214 aaPredicted RBP3.82□□□□□ -1.8
SMN2-208ENST00000508258 KCNC4Q03721 635 aa3.82□□□□□ -1.8
SMN2-208ENST00000508258 SLF2Q8IX21 1173 aa3.82□□□□□ -1.8
SMN2-208ENST00000508258 RBM46Q8TBY0 533 aaKnown RBP3.82□□□□□ -1.8
SMN2-208ENST00000508258 ZMYND10O75800 440 aa3.81□□□□□ -1.8
SMN2-208ENST00000508258 ERICH6Q7L0X2 663 aa3.81□□□□□ -1.8
SMN2-208ENST00000508258 NECTIN2Q92692 538 aa3.81□□□□□ -1.8
SMN2-208ENST00000508258 A0A0G2JS52 829 aa3.8□□□□□ -1.8
SMN2-208ENST00000508258 ITGBL1O95965 494 aaPredicted RBP3.8□□□□□ -1.8
SMN2-208ENST00000508258 DNAJB2P25686 324 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms