RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
LIN54-207ENST00000508171 MYT1Q01538 1121 aa14.91□□□□□ -0.02
LIN54-207ENST00000508171 ROCK2O75116 1388 aaKnown RBP14.89□□□□□ -0.03
LIN54-207ENST00000508171 CCDC144AA2RUR9 1427 aa14.88□□□□□ -0.03
LIN54-207ENST00000508171 PLA2R1Q13018 1463 aa14.88□□□□□ -0.03
LIN54-207ENST00000508171 NBPF1Q3BBV0 1214 aa14.88□□□□□ -0.03
LIN54-207ENST00000508171 PLEKHH2Q8IVE3 1493 aa14.87□□□□□ -0.03
LIN54-207ENST00000508171 ABCC2Q92887 1545 aa14.87□□□□□ -0.03
LIN54-207ENST00000508171 MYO5CQ9NQX4 1742 aa14.87□□□□□ -0.03
LIN54-207ENST00000508171 PNISRQ8TF01 805 aaKnown RBP14.87□□□□□ -0.03
LIN54-207ENST00000508171 TMC1Q8TDI8 760 aa14.86□□□□□ -0.03
LIN54-207ENST00000508171 PPP4R2Q9NY27 417 aa14.86□□□□□ -0.03
LIN54-207ENST00000508171 MAST1Q9Y2H9 1570 aa14.86□□□□□ -0.03
LIN54-207ENST00000508171 ERICH6BQ5W0A0 696 aa14.85□□□□□ -0.03
LIN54-207ENST00000508171 PRAG1Q86YV5 1406 aa14.85□□□□□ -0.03
LIN54-207ENST00000508171 UNC13BO14795 1591 aa14.85□□□□□ -0.03
LIN54-207ENST00000508171 TRPM1Q7Z4N2 1603 aa14.84□□□□□ -0.03
LIN54-207ENST00000508171 B4GALNT3Q6L9W6 998 aa14.83□□□□□ -0.03
LIN54-207ENST00000508171 A2MP01023 1474 aa14.82□□□□□ -0.04
LIN54-207ENST00000508171 PLXNC1O60486 1568 aa14.82□□□□□ -0.04
LIN54-207ENST00000508171 SMG6Q86US8 1419 aaKnown RBP14.81□□□□□ -0.04
LIN54-207ENST00000508171 IQGAP3Q86VI3 1631 aa14.81□□□□□ -0.04
LIN54-207ENST00000508171 PLCH2O75038 1416 aa14.8□□□□□ -0.04
LIN54-207ENST00000508171 ZCCHC11Q5TAX3 1644 aaKnown RBP14.8□□□□□ -0.04
LIN54-207ENST00000508171 E9PCH4 1651 aa14.8□□□□□ -0.04
LIN54-207ENST00000508171 EFCAB2Q5VUJ9 269 aa14.79□□□□□ -0.04
LIN54-207ENST00000508171 ANP32EQ9BTT0 268 aa14.79□□□□□ -0.04
LIN54-207ENST00000508171 DUOX2Q9NRD8 1548 aa14.79□□□□□ -0.04
LIN54-207ENST00000508171 NUDCQ9Y266 331 aa14.79□□□□□ -0.04
LIN54-207ENST00000508171 MYBBP1AQ9BQG0 1328 aaKnown RBP14.79□□□□□ -0.04
LIN54-207ENST00000508171 TRAPPC8Q9Y2L5 1435 aa14.78□□□□□ -0.04
LIN54-207ENST00000508171 RALBP1Q15311 655 aa14.78□□□□□ -0.04
LIN54-207ENST00000508171 PER1O15534 1290 aaPredicted RBP14.77□□□□□ -0.05
LIN54-207ENST00000508171 AFAP1Q8N556 730 aa14.77□□□□□ -0.05
LIN54-207ENST00000508171 TESK2Q96S53 571 aa14.77□□□□□ -0.05
LIN54-207ENST00000508171 BRD4O60885 1362 aaPredicted RBP14.76□□□□□ -0.05
LIN54-207ENST00000508171 GPRASP1Q5JY77 1395 aa14.76□□□□□ -0.05
LIN54-207ENST00000508171 LRPPRCP42704 1394 aaKnown RBP14.76□□□□□ -0.05
LIN54-207ENST00000508171 DISP3Q9P2K9 1392 aa14.75□□□□□ -0.05
LIN54-207ENST00000508171 ERBINQ96RT1 1412 aa14.75□□□□□ -0.05
LIN54-207ENST00000508171 MAGI2Q86UL8 1455 aa14.75□□□□□ -0.05
LIN54-207ENST00000508171 CLASP1Q7Z460 1538 aa14.74□□□□□ -0.05
LIN54-207ENST00000508171 KTN1Q86UP2 1357 aaKnown RBP14.74□□□□□ -0.05
LIN54-207ENST00000508171 ABCC1P33527 1531 aa14.74□□□□□ -0.05
LIN54-207ENST00000508171 ATP10AO60312 1499 aa14.73□□□□□ -0.05
LIN54-207ENST00000508171 PRDM15P57071 1507 aaPredicted RBP14.73□□□□□ -0.05
LIN54-207ENST00000508171 SALL2Q9Y467 1007 aaPredicted RBP14.73□□□□□ -0.05
LIN54-207ENST00000508171 RNF123Q5XPI4 1314 aa14.73□□□□□ -0.05
LIN54-207ENST00000508171 UHRF1BP1LA0JNW5 1464 aa14.73□□□□□ -0.05
LIN54-207ENST00000508171 MSH5O43196 834 aa14.72□□□□□ -0.05
LIN54-207ENST00000508171 PARD3Q8TEW0 1356 aa14.72□□□□□ -0.05
LIN54-207ENST00000508171 CC2D1BQ5T0F9 858 aaKnown RBP14.72□□□□□ -0.05
LIN54-207ENST00000508171 SPAG9O60271 1321 aaKnown RBP14.72□□□□□ -0.05
LIN54-207ENST00000508171 NLRP13Q86W25 1043 aa14.71□□□□□ -0.05
LIN54-207ENST00000508171 PANK3Q9H999 370 aa14.71□□□□□ -0.05
LIN54-207ENST00000508171 COL17A1Q9UMD9 1497 aaPredicted RBP14.71□□□□□ -0.05
LIN54-207ENST00000508171 LAMC1P11047 1609 aa14.7□□□□□ -0.06
LIN54-207ENST00000508171 EIF2AK4Q9P2K8 1649 aaKnown RBP14.68□□□□□ -0.06
LIN54-207ENST00000508171 TMF1P82094 1093 aa14.68□□□□□ -0.06
LIN54-207ENST00000508171 FANCIQ9NVI1 1328 aa14.66□□□□□ -0.06
LIN54-207ENST00000508171 CCDC136Q96JN2 1154 aa14.66□□□□□ -0.06
LIN54-207ENST00000508171 ZFYVE16Q7Z3T8 1539 aa14.65□□□□□ -0.06
LIN54-207ENST00000508171 RTEL1-TNFRSF6BF6WH68 1400 aa14.64□□□□□ -0.07
LIN54-207ENST00000508171 WASHC2CQ9Y4E1 1318 aa14.64□□□□□ -0.07
LIN54-207ENST00000508171 MYT1LQ9UL68 1186 aa14.64□□□□□ -0.07
LIN54-207ENST00000508171 RNF17Q9BXT8 1623 aaKnown RBP14.64□□□□□ -0.07
LIN54-207ENST00000508171 CDCA7LQ96GN5 454 aa14.63□□□□□ -0.07
LIN54-207ENST00000508171 MADDQ8WXG6 1647 aa14.63□□□□□ -0.07
LIN54-207ENST00000508171 KIF3BO15066 747 aa14.62□□□□□ -0.07
LIN54-207ENST00000508171 SPHKAPQ2M3C7 1700 aa14.62□□□□□ -0.07
LIN54-207ENST00000508171 FANCAO15360 1455 aa14.62□□□□□ -0.07
LIN54-207ENST00000508171 WDR7Q9Y4E6 1490 aa14.61□□□□□ -0.07
LIN54-207ENST00000508171 TRPM2O94759 1503 aa14.61□□□□□ -0.07
LIN54-207ENST00000508171 CLTCL1P53675 1640 aa14.61□□□□□ -0.07
LIN54-207ENST00000508171 CEP152O94986 1710 aa14.61□□□□□ -0.07
LIN54-207ENST00000508171 ARAP3Q8WWN8 1544 aa14.61□□□□□ -0.07
LIN54-207ENST00000508171 PTPRTO14522 1441 aa14.61□□□□□ -0.07
LIN54-207ENST00000508171 RCAN3Q9UKA8 241 aa14.6□□□□□ -0.07
LIN54-207ENST00000508171 SCAPERQ9BY12 1400 aa14.6□□□□□ -0.07
LIN54-207ENST00000508171 DEPDC5O75140 1603 aa14.6□□□□□ -0.07
LIN54-207ENST00000508171 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
LIN54-207ENST00000508171 ATP7AQ04656 1500 aa14.59□□□□□ -0.07
LIN54-207ENST00000508171 IQGAP1P46940 1657 aa14.59□□□□□ -0.07
LIN54-207ENST00000508171 ABCA9Q8IUA7 1624 aa14.58□□□□□ -0.08
LIN54-207ENST00000508171 TET3O43151 1660 aa14.58□□□□□ -0.08
LIN54-207ENST00000508171 EXOC6Q8TAG9 804 aa14.58□□□□□ -0.08
LIN54-207ENST00000508171 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
LIN54-207ENST00000508171 KNSTRNQ9Y448 316 aa14.57□□□□□ -0.08
LIN54-207ENST00000508171 ADAMTS8Q9UP79 889 aa14.57□□□□□ -0.08
LIN54-207ENST00000508171 INO80Q9ULG1 1556 aaPredicted RBP14.57□□□□□ -0.08
LIN54-207ENST00000508171 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
LIN54-207ENST00000508171 KANK1Q14678 1352 aa14.56□□□□□ -0.08
LIN54-207ENST00000508171 SCAF11Q99590 1463 aaKnown RBP14.56□□□□□ -0.08
LIN54-207ENST00000508171 UGGT1Q9NYU2 1555 aa14.55□□□□□ -0.08
LIN54-207ENST00000508171 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
LIN54-207ENST00000508171 VWDEQ8N2E2 1590 aa14.55□□□□□ -0.08
LIN54-207ENST00000508171 BLMP54132 1417 aaPredicted RBP14.54□□□□□ -0.08
LIN54-207ENST00000508171 PPP2R1AP30153 589 aa14.54□□□□□ -0.08
LIN54-207ENST00000508171 CFAP70Q5T0N1 1121 aa14.54□□□□□ -0.08
LIN54-207ENST00000508171 STAC3Q96MF2 364 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms