RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, humanhuman

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-205ENST00000507316 PKDCCQ504Y2 493 aa9.03□□□□□ -0.96
TUSC3-205ENST00000507316 PROX2Q3B8N5 592 aa9□□□□□ -0.97
TUSC3-205ENST00000507316 LAPTM4BQ86VI4 370 aa9□□□□□ -0.97
TUSC3-205ENST00000507316 ADAM33Q9BZ11 813 aa8.99□□□□□ -0.97
TUSC3-205ENST00000507316 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.98□□□□□ -0.97
TUSC3-205ENST00000507316 TSR3Q9UJK0 312 aaKnown RBP8.98□□□□□ -0.97
TUSC3-205ENST00000507316 HPS5Q9UPZ3 1129 aa8.98□□□□□ -0.97
TUSC3-205ENST00000507316 WIPF1O43516 503 aa8.97□□□□□ -0.97
TUSC3-205ENST00000507316 DGAT1O75907 488 aa8.97□□□□□ -0.97
TUSC3-205ENST00000507316 DSG2Q14126 1118 aa8.96□□□□□ -0.98
TUSC3-205ENST00000507316 TJAP1Q5JTD0 557 aa8.96□□□□□ -0.98
TUSC3-205ENST00000507316 AMER1Q5JTC6 1135 aaPredicted RBP8.95□□□□□ -0.98
TUSC3-205ENST00000507316 UPF1Q92900 1129 aaKnown RBP eCLIP8.95□□□□□ -0.98
TUSC3-205ENST00000507316 ZDHHC16Q969W1 377 aa8.95□□□□□ -0.98
TUSC3-205ENST00000507316 TRIM67Q6ZTA4 783 aa8.94□□□□□ -0.98
TUSC3-205ENST00000507316 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
TUSC3-205ENST00000507316 DCAF8L2P0C7V8 631 aa8.93□□□□□ -0.98
TUSC3-205ENST00000507316 OXER1Q8TDS5 423 aa8.93□□□□□ -0.98
TUSC3-205ENST00000507316 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.92□□□□□ -0.98
TUSC3-205ENST00000507316 PPP1R37O75864 691 aa8.91□□□□□ -0.98
TUSC3-205ENST00000507316 CHGAP10645 457 aaKnown RBP8.91□□□□□ -0.98
TUSC3-205ENST00000507316 JPH4Q96JJ6 628 aa8.91□□□□□ -0.98
TUSC3-205ENST00000507316 GPHNQ9NQX3 736 aaPredicted RBP8.91□□□□□ -0.98
TUSC3-205ENST00000507316 KIAA1468Q9P260 1216 aa8.91□□□□□ -0.98
TUSC3-205ENST00000507316 SEPT9Q9UHD8 586 aaPredicted RBP8.9□□□□□ -0.98
TUSC3-205ENST00000507316 NFX1Q12986 1120 aaKnown RBP8.89□□□□□ -0.99
TUSC3-205ENST00000507316 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
TUSC3-205ENST00000507316 COL9A1P20849 921 aa8.88□□□□□ -0.99
TUSC3-205ENST00000507316 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
TUSC3-205ENST00000507316 ST8SIA5O15466 376 aa8.87□□□□□ -0.99
TUSC3-205ENST00000507316 HS6ST3Q8IZP7 471 aa8.86□□□□□ -0.99
TUSC3-205ENST00000507316 MTRQ99707 1265 aa8.86□□□□□ -0.99
TUSC3-205ENST00000507316 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
TUSC3-205ENST00000507316 FAM187AA6NFU0 413 aa8.84□□□□□ -0.99
TUSC3-205ENST00000507316 PPP4CP60510 307 aa8.84□□□□□ -0.99
TUSC3-205ENST00000507316 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
TUSC3-205ENST00000507316 ANO8Q9HCE9 1232 aaPredicted RBP8.84□□□□□ -0.99
TUSC3-205ENST00000507316 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
TUSC3-205ENST00000507316 SLC24A1O60721 1099 aa8.81□□□□□ -1
TUSC3-205ENST00000507316 FAM98CQ17RN3 349 aaKnown RBP8.81□□□□□ -1
TUSC3-205ENST00000507316 FAM181BA6NEQ2 426 aa8.8□□□□□ -1
TUSC3-205ENST00000507316 NKX2-3Q8TAU0 364 aa8.8□□□□□ -1
TUSC3-205ENST00000507316 GGCXP38435 758 aa8.79□□□□□ -1
TUSC3-205ENST00000507316 PRR20EP86478 221 aa8.78□□□□□ -1
TUSC3-205ENST00000507316 PRR20CP86479 221 aa8.78□□□□□ -1
TUSC3-205ENST00000507316 PRR20DP86480 221 aa8.78□□□□□ -1
TUSC3-205ENST00000507316 PRR20BP86481 221 aa8.78□□□□□ -1
TUSC3-205ENST00000507316 PRR20AP86496 221 aa8.78□□□□□ -1
TUSC3-205ENST00000507316 LCE2CQ5TA81 110 aa8.78□□□□□ -1
TUSC3-205ENST00000507316 ONECUT3O60422 494 aaPredicted RBP8.77□□□□□ -1.01
TUSC3-205ENST00000507316 EVI5O60447 810 aa8.77□□□□□ -1.01
TUSC3-205ENST00000507316 C11orf95C9JLR9 678 aaPredicted RBP8.76□□□□□ -1.01
TUSC3-205ENST00000507316 SLC19A1P41440 591 aa8.76□□□□□ -1.01
TUSC3-205ENST00000507316 DACH1Q9UI36 760 aa8.75□□□□□ -1.01
TUSC3-205ENST00000507316 RYDENQ9NUL5 291 aaKnown RBP8.74□□□□□ -1.01
TUSC3-205ENST00000507316 TMUB1Q9BVT8 246 aa8.73□□□□□ -1.01
TUSC3-205ENST00000507316 GMPR2Q9P2T1 348 aaKnown RBP8.73□□□□□ -1.01
TUSC3-205ENST00000507316 SPRYD7Q5W111 196 aa8.72□□□□□ -1.01
TUSC3-205ENST00000507316 ZNF598Q86UK7 904 aaKnown RBP8.72□□□□□ -1.01
TUSC3-205ENST00000507316 TNFRSF10AO00220 468 aa8.71□□□□□ -1.02
TUSC3-205ENST00000507316 NKX1-1Q15270 411 aaPredicted RBP8.71□□□□□ -1.02
TUSC3-205ENST00000507316 EMID1Q96A84 441 aaPredicted RBP8.71□□□□□ -1.02
TUSC3-205ENST00000507316 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
TUSC3-205ENST00000507316 TRIM6-TRIM34B2RNG4 842 aa8.69□□□□□ -1.02
TUSC3-205ENST00000507316 DNAJC5Q9H3Z4 198 aa8.68□□□□□ -1.02
TUSC3-205ENST00000507316 GDF9O60383 454 aa8.67□□□□□ -1.02
TUSC3-205ENST00000507316 TERTO14746 1132 aaKnown RBP8.66□□□□□ -1.02
TUSC3-205ENST00000507316 ZNF697Q5TEC3 545 aa8.65□□□□□ -1.02
TUSC3-205ENST00000507316 SAMD7Q7Z3H4 446 aa8.64□□□□□ -1.03
TUSC3-205ENST00000507316 ZSCAN1Q8NBB4 408 aa8.63□□□□□ -1.03
TUSC3-205ENST00000507316 RNF223E7ERA6 249 aa8.62□□□□□ -1.03
TUSC3-205ENST00000507316 TYW1BQ6NUM6 668 aa8.62□□□□□ -1.03
TUSC3-205ENST00000507316 CRIPAKQ8N1N5 446 aa8.62□□□□□ -1.03
TUSC3-205ENST00000507316 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
TUSC3-205ENST00000507316 GTPBP6O43824 516 aaPredicted RBP8.61□□□□□ -1.03
TUSC3-205ENST00000507316 PPP1R15BQ5SWA1 713 aa8.61□□□□□ -1.03
TUSC3-205ENST00000507316 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
TUSC3-205ENST00000507316 APLP1P51693 650 aa8.6□□□□□ -1.03
TUSC3-205ENST00000507316 COPS2P61201 443 aa8.6□□□□□ -1.03
TUSC3-205ENST00000507316 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
TUSC3-205ENST00000507316 KCTD17Q8N5Z5 321 aa8.6□□□□□ -1.03
TUSC3-205ENST00000507316 ERICH6Q7L0X2 663 aa8.59□□□□□ -1.03
TUSC3-205ENST00000507316 AXIN1O15169 862 aa8.58□□□□□ -1.04
TUSC3-205ENST00000507316 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
TUSC3-205ENST00000507316 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
TUSC3-205ENST00000507316 PHF14O94880 888 aa8.55□□□□□ -1.04
TUSC3-205ENST00000507316 XP32Q5T750 250 aa8.55□□□□□ -1.04
TUSC3-205ENST00000507316 PACS2Q86VP3 889 aa8.55□□□□□ -1.04
TUSC3-205ENST00000507316 BBXQ8WY36 941 aaPredicted RBP8.55□□□□□ -1.04
TUSC3-205ENST00000507316 KRTAP4-8Q9BYQ9 185 aa8.55□□□□□ -1.04
TUSC3-205ENST00000507316 PDE4AP27815 886 aa8.54□□□□□ -1.04
TUSC3-205ENST00000507316 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.54□□□□□ -1.04
TUSC3-205ENST00000507316 ZPR1O75312 459 aa8.53□□□□□ -1.04
TUSC3-205ENST00000507316 SNRPBP14678 240 aaKnown RBP8.53□□□□□ -1.04
TUSC3-205ENST00000507316 TSKSQ9UJT2 592 aa8.53□□□□□ -1.04
TUSC3-205ENST00000507316 SMAPO00193 183 aa8.52□□□□□ -1.05
TUSC3-205ENST00000507316 RNF40O75150 1001 aa8.52□□□□□ -1.05
TUSC3-205ENST00000507316 AVPP01185 164 aa8.52□□□□□ -1.05
TUSC3-205ENST00000507316 LARP6Q9BRS8 491 aaKnown RBP8.52□□□□□ -1.05
TUSC3-205ENST00000507316 CRISPLD2Q9H0B8 497 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms