RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 PPP1R3GB7ZBB8 358 aa9.31□□□□□ -0.92
TOPBP1-205ENST00000506779 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
TOPBP1-205ENST00000506779 ANO8Q9HCE9 1232 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-205ENST00000506779 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
TOPBP1-205ENST00000506779 TSR3Q9UJK0 312 aaKnown RBP9.3□□□□□ -0.92
TOPBP1-205ENST00000506779 HPS5Q9UPZ3 1129 aa9.28□□□□□ -0.92
TOPBP1-205ENST00000506779 TJAP1Q5JTD0 557 aa9.27□□□□□ -0.93
TOPBP1-205ENST00000506779 KIAA1468Q9P260 1216 aa9.27□□□□□ -0.93
TOPBP1-205ENST00000506779 COL9A1P20849 921 aa9.26□□□□□ -0.93
TOPBP1-205ENST00000506779 MYT1Q01538 1121 aa9.26□□□□□ -0.93
TOPBP1-205ENST00000506779 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-205ENST00000506779 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-205ENST00000506779 SEPT9Q9UHD8 586 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-205ENST00000506779 LRCH3Q96II8 777 aa9.22□□□□□ -0.93
TOPBP1-205ENST00000506779 PKDCCQ504Y2 493 aa9.21□□□□□ -0.94
TOPBP1-205ENST00000506779 EVI5O60447 810 aa9.2□□□□□ -0.94
TOPBP1-205ENST00000506779 DGAT1O75907 488 aa9.19□□□□□ -0.94
TOPBP1-205ENST00000506779 FAM98CQ17RN3 349 aaKnown RBP9.19□□□□□ -0.94
TOPBP1-205ENST00000506779 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
TOPBP1-205ENST00000506779 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
TOPBP1-205ENST00000506779 IL21Q9HBE4 155 aa9.17□□□□□ -0.94
TOPBP1-205ENST00000506779 PPP4CP60510 307 aa9.16□□□□□ -0.94
TOPBP1-205ENST00000506779 MTRQ99707 1265 aa9.16□□□□□ -0.94
TOPBP1-205ENST00000506779 WFS1O76024 890 aa9.15□□□□□ -0.94
TOPBP1-205ENST00000506779 INSM1Q01101 510 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-205ENST00000506779 PCDHGA10Q9Y5H3 936 aa9.14□□□□□ -0.95
TOPBP1-205ENST00000506779 ZNF516Q92618 1163 aa9.13□□□□□ -0.95
TOPBP1-205ENST00000506779 WIPF1O43516 503 aa9.12□□□□□ -0.95
TOPBP1-205ENST00000506779 PPP1R15BQ5SWA1 713 aa9.1□□□□□ -0.95
TOPBP1-205ENST00000506779 TRIM6-TRIM34B2RNG4 842 aa9.09□□□□□ -0.95
TOPBP1-205ENST00000506779 NKX2-3Q8TAU0 364 aa9.09□□□□□ -0.95
TOPBP1-205ENST00000506779 FBXW7Q969H0 707 aa9.08□□□□□ -0.96
TOPBP1-205ENST00000506779 GGCXP38435 758 aa9.07□□□□□ -0.96
TOPBP1-205ENST00000506779 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
TOPBP1-205ENST00000506779 TYW1BQ6NUM6 668 aa9.06□□□□□ -0.96
TOPBP1-205ENST00000506779 CRISPLD2Q9H0B8 497 aa9.06□□□□□ -0.96
TOPBP1-205ENST00000506779 FAM187AA6NFU0 413 aa9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 PRR20EP86478 221 aa9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 PRR20CP86479 221 aa9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 PRR20DP86480 221 aa9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 PRR20BP86481 221 aa9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 PRR20AP86496 221 aa9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 NFX1Q12986 1120 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 SUZ12Q15022 739 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 TMUB1Q9BVT8 246 aa9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 AAASQ9NRG9 546 aa9.04□□□□□ -0.96
TOPBP1-205ENST00000506779 SLC19A1P41440 591 aa9.03□□□□□ -0.96
TOPBP1-205ENST00000506779 MAP3K9P80192 1104 aa9.02□□□□□ -0.97
TOPBP1-205ENST00000506779 PHF14O94880 888 aa9.01□□□□□ -0.97
TOPBP1-205ENST00000506779 C6orf132Q5T0Z8 1188 aa9.01□□□□□ -0.97
TOPBP1-205ENST00000506779 EMID1Q96A84 441 aaPredicted RBP9□□□□□ -0.97
TOPBP1-205ENST00000506779 SAMD7Q7Z3H4 446 aa8.99□□□□□ -0.97
TOPBP1-205ENST00000506779 SPRYD7Q5W111 196 aa8.98□□□□□ -0.97
TOPBP1-205ENST00000506779 ZNF598Q86UK7 904 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-205ENST00000506779 PACS2Q86VP3 889 aa8.95□□□□□ -0.98
TOPBP1-205ENST00000506779 TNFRSF10AO00220 468 aa8.94□□□□□ -0.98
TOPBP1-205ENST00000506779 ECM2O94769 699 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-205ENST00000506779 APLP1P51693 650 aa8.94□□□□□ -0.98
TOPBP1-205ENST00000506779 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
TOPBP1-205ENST00000506779 DACH1Q9UI36 760 aa8.94□□□□□ -0.98
TOPBP1-205ENST00000506779 C11orf95C9JLR9 678 aaPredicted RBP8.93□□□□□ -0.98
TOPBP1-205ENST00000506779 RGL2O15211 777 aa8.93□□□□□ -0.98
TOPBP1-205ENST00000506779 GDF9O60383 454 aa8.93□□□□□ -0.98
TOPBP1-205ENST00000506779 NCKAP5LQ9HCH0 1330 aa8.92□□□□□ -0.98
TOPBP1-205ENST00000506779 RNF223E7ERA6 249 aa8.92□□□□□ -0.98
TOPBP1-205ENST00000506779 GMPR2Q9P2T1 348 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-205ENST00000506779 TSKSQ9UJT2 592 aa8.92□□□□□ -0.98
TOPBP1-205ENST00000506779 COPS2P61201 443 aa8.91□□□□□ -0.98
TOPBP1-205ENST00000506779 ZNF697Q5TEC3 545 aa8.91□□□□□ -0.98
TOPBP1-205ENST00000506779 FAM181BA6NEQ2 426 aa8.9□□□□□ -0.98
TOPBP1-205ENST00000506779 PDE4AP27815 886 aa8.9□□□□□ -0.98
TOPBP1-205ENST00000506779 EPAS1Q99814 870 aa8.9□□□□□ -0.98
TOPBP1-205ENST00000506779 CRIPAKQ8N1N5 446 aa8.89□□□□□ -0.99
TOPBP1-205ENST00000506779 EMILIN3Q9NT22 766 aa8.88□□□□□ -0.99
TOPBP1-205ENST00000506779 SMAPO00193 183 aa8.87□□□□□ -0.99
TOPBP1-205ENST00000506779 LIAT1Q6ZQX7 453 aa8.87□□□□□ -0.99
TOPBP1-205ENST00000506779 ZPR1O75312 459 aa8.86□□□□□ -0.99
TOPBP1-205ENST00000506779 RBM33Q96EV2 1170 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-205ENST00000506779 TERTO14746 1132 aaKnown RBP8.83□□□□□ -1
TOPBP1-205ENST00000506779 RNF40O75150 1001 aa8.83□□□□□ -1
TOPBP1-205ENST00000506779 ANKLE1Q8NAG6 615 aa8.82□□□□□ -1
TOPBP1-205ENST00000506779 DDX27Q96GQ7 796 aaKnown RBP8.82□□□□□ -1
TOPBP1-205ENST00000506779 LARP6Q9BRS8 491 aaKnown RBP8.82□□□□□ -1
TOPBP1-205ENST00000506779 AXIN1O15169 862 aa8.8□□□□□ -1
TOPBP1-205ENST00000506779 C3orf80F5H4A9 247 aa8.79□□□□□ -1
TOPBP1-205ENST00000506779 PPEF1O14829 653 aaPredicted RBP8.79□□□□□ -1
TOPBP1-205ENST00000506779 AVPP01185 164 aa8.79□□□□□ -1
TOPBP1-205ENST00000506779 HDGFP51858 240 aaKnown RBP8.78□□□□□ -1
TOPBP1-205ENST00000506779 FAM198AQ9UFP1 575 aa8.78□□□□□ -1
TOPBP1-205ENST00000506779 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-205ENST00000506779 TATDN2Q93075 761 aa8.77□□□□□ -1.01
TOPBP1-205ENST00000506779 NECTIN2Q92692 538 aa8.76□□□□□ -1.01
TOPBP1-205ENST00000506779 CDCA7LQ96GN5 454 aa8.76□□□□□ -1.01
TOPBP1-205ENST00000506779 PKD2L1Q9P0L9 805 aa8.76□□□□□ -1.01
TOPBP1-205ENST00000506779 MFSD10Q14728 455 aa8.75□□□□□ -1.01
TOPBP1-205ENST00000506779 CTC1Q2NKJ3 1217 aa8.75□□□□□ -1.01
TOPBP1-205ENST00000506779 TSR1Q2NL82 804 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-205ENST00000506779 ZSCAN1Q8NBB4 408 aa8.75□□□□□ -1.01
TOPBP1-205ENST00000506779 SNRPBP14678 240 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-205ENST00000506779 PRSS12P56730 875 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms