RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
TRIO-208ENST00000506611 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
TRIO-208ENST00000506611 EPAS1Q99814 870 aa11.27□□□□□ -0.61
TRIO-208ENST00000506611 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
TRIO-208ENST00000506611 NBR1Q14596 966 aa11.25□□□□□ -0.61
TRIO-208ENST00000506611 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
TRIO-208ENST00000506611 SLC4A5Q9BY07 1137 aa11.24□□□□□ -0.61
TRIO-208ENST00000506611 KDM2AQ9Y2K7 1162 aa11.24□□□□□ -0.61
TRIO-208ENST00000506611 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
TRIO-208ENST00000506611 C6orf132Q5T0Z8 1188 aa11.23□□□□□ -0.61
TRIO-208ENST00000506611 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
TRIO-208ENST00000506611 KCNH8Q96L42 1107 aa11.23□□□□□ -0.61
TRIO-208ENST00000506611 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
TRIO-208ENST00000506611 PPP1R3GB7ZBB8 358 aa11.22□□□□□ -0.61
TRIO-208ENST00000506611 BHMG1C9JSJ3 638 aaPredicted RBP11.22□□□□□ -0.61
TRIO-208ENST00000506611 EN1Q05925 392 aaPredicted RBP11.22□□□□□ -0.61
TRIO-208ENST00000506611 PROX2Q3B8N5 592 aa11.22□□□□□ -0.61
TRIO-208ENST00000506611 OSBPP22059 807 aa11.21□□□□□ -0.61
TRIO-208ENST00000506611 MLLT3P42568 568 aaPredicted RBP11.19□□□□□ -0.62
TRIO-208ENST00000506611 MAP3K7O43318 606 aa11.17□□□□□ -0.62
TRIO-208ENST00000506611 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
TRIO-208ENST00000506611 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
TRIO-208ENST00000506611 SEMA3EO15041 775 aa11.12□□□□□ -0.63
TRIO-208ENST00000506611 RABGEF1Q9UJ41 708 aa11.11□□□□□ -0.63
TRIO-208ENST00000506611 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
TRIO-208ENST00000506611 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
TRIO-208ENST00000506611 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
TRIO-208ENST00000506611 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
TRIO-208ENST00000506611 TSKSQ9UJT2 592 aa11.1□□□□□ -0.63
TRIO-208ENST00000506611 C3orf80F5H4A9 247 aa11.08□□□□□ -0.64
TRIO-208ENST00000506611 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
TRIO-208ENST00000506611 MRPL50Q8N5N7 158 aaKnown RBP11.07□□□□□ -0.64
TRIO-208ENST00000506611 ONECUT3O60422 494 aaPredicted RBP11.06□□□□□ -0.64
TRIO-208ENST00000506611 STAC3Q96MF2 364 aa11.06□□□□□ -0.64
TRIO-208ENST00000506611 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
TRIO-208ENST00000506611 VSIG10Q8N0Z9 540 aa11.05□□□□□ -0.64
TRIO-208ENST00000506611 CDCA7LQ96GN5 454 aa11.05□□□□□ -0.64
TRIO-208ENST00000506611 SEPT9Q9UHD8 586 aaPredicted RBP11.05□□□□□ -0.64
TRIO-208ENST00000506611 PRSS12P56730 875 aa11.04□□□□□ -0.64
TRIO-208ENST00000506611 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
TRIO-208ENST00000506611 THSD4Q6ZMP0 1018 aa11.02□□□□□ -0.65
TRIO-208ENST00000506611 WNT2BQ93097 391 aa11.02□□□□□ -0.65
TRIO-208ENST00000506611 HCSTQ9UBK5 93 aa11.02□□□□□ -0.65
TRIO-208ENST00000506611 LAPTM4BQ86VI4 370 aa11□□□□□ -0.65
TRIO-208ENST00000506611 CERKQ8TCT0 537 aa11□□□□□ -0.65
TRIO-208ENST00000506611 TTC13Q8NBP0 860 aa10.99□□□□□ -0.65
TRIO-208ENST00000506611 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
TRIO-208ENST00000506611 SMAPO00193 183 aa10.98□□□□□ -0.65
TRIO-208ENST00000506611 PTPN5P54829 565 aa10.98□□□□□ -0.65
TRIO-208ENST00000506611 GOLGA8CPA6NN73 597 aa10.97□□□□□ -0.65
TRIO-208ENST00000506611 BCAMP50895 628 aa10.97□□□□□ -0.65
TRIO-208ENST00000506611 PTGDRQ13258 359 aa10.97□□□□□ -0.65
TRIO-208ENST00000506611 PADI6Q6TGC4 694 aa10.97□□□□□ -0.65
TRIO-208ENST00000506611 PACS2Q86VP3 889 aa10.97□□□□□ -0.65
TRIO-208ENST00000506611 FAM98CQ17RN3 349 aaKnown RBP10.96□□□□□ -0.65
TRIO-208ENST00000506611 RBM27Q9P2N5 1060 aaKnown RBP10.96□□□□□ -0.65
TRIO-208ENST00000506611 RBM26Q5T8P6 1007 aaKnown RBP10.95□□□□□ -0.66
TRIO-208ENST00000506611 TATDN2Q93075 761 aa10.94□□□□□ -0.66
TRIO-208ENST00000506611 SOWAHBA6NEL2 793 aa10.93□□□□□ -0.66
TRIO-208ENST00000506611 ANKK1Q8NFD2 765 aa10.93□□□□□ -0.66
TRIO-208ENST00000506611 NUDT18Q6ZVK8 323 aa10.92□□□□□ -0.66
TRIO-208ENST00000506611 PNMA3Q9UL41 463 aa10.92□□□□□ -0.66
TRIO-208ENST00000506611 NUTM2FA1L443 756 aa10.91□□□□□ -0.66
TRIO-208ENST00000506611 NBPF26B4DH59 902 aa10.9□□□□□ -0.66
TRIO-208ENST00000506611 GPR37O15354 613 aa10.9□□□□□ -0.66
TRIO-208ENST00000506611 WBP1LQ9NX94 342 aa10.88□□□□□ -0.67
TRIO-208ENST00000506611 FAM161AQ3B820 660 aa10.87□□□□□ -0.67
TRIO-208ENST00000506611 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
TRIO-208ENST00000506611 EYA1Q99502 592 aa10.87□□□□□ -0.67
TRIO-208ENST00000506611 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
TRIO-208ENST00000506611 PLA2G2EQ9NZK7 142 aa10.86□□□□□ -0.67
TRIO-208ENST00000506611 LRCH3Q96II8 777 aa10.85□□□□□ -0.67
TRIO-208ENST00000506611 FCHSD2O94868 740 aa10.84□□□□□ -0.67
TRIO-208ENST00000506611 FECHP22830 423 aa10.84□□□□□ -0.67
TRIO-208ENST00000506611 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
TRIO-208ENST00000506611 SMYD5Q6GMV2 418 aa10.83□□□□□ -0.68
TRIO-208ENST00000506611 HPS5Q9UPZ3 1129 aa10.83□□□□□ -0.68
TRIO-208ENST00000506611 TSR3Q9UJK0 312 aaKnown RBP10.82□□□□□ -0.68
TRIO-208ENST00000506611 HIC1Q14526 733 aa10.79□□□□□ -0.68
TRIO-208ENST00000506611 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
TRIO-208ENST00000506611 GNPATO15228 680 aa10.76□□□□□ -0.69
TRIO-208ENST00000506611 GPIHBP1Q8IV16 184 aa10.76□□□□□ -0.69
TRIO-208ENST00000506611 PPP4CP60510 307 aa10.75□□□□□ -0.69
TRIO-208ENST00000506611 ITGBL1O95965 494 aaPredicted RBP10.74□□□□□ -0.69
TRIO-208ENST00000506611 NYAP1Q6ZVC0 841 aa10.74□□□□□ -0.69
TRIO-208ENST00000506611 PXYLP1Q8TE99 480 aa10.74□□□□□ -0.69
TRIO-208ENST00000506611 RCCD1A6NED2 376 aa10.73□□□□□ -0.69
TRIO-208ENST00000506611 RNF40O75150 1001 aa10.73□□□□□ -0.69
TRIO-208ENST00000506611 RBM46Q8TBY0 533 aaKnown RBP10.73□□□□□ -0.69
TRIO-208ENST00000506611 TMEM134Q9H6X4 195 aa10.73□□□□□ -0.69
TRIO-208ENST00000506611 DNAJB2P25686 324 aa10.72□□□□□ -0.69
TRIO-208ENST00000506611 APLP1P51693 650 aa10.72□□□□□ -0.69
TRIO-208ENST00000506611 IFFO2Q5TF58 517 aa10.72□□□□□ -0.69
TRIO-208ENST00000506611 METTL3Q86U44 580 aaKnown RBP10.72□□□□□ -0.69
TRIO-208ENST00000506611 PHOX2BQ99453 314 aa10.71□□□□□ -0.69
TRIO-208ENST00000506611 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRIO-208ENST00000506611 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
TRIO-208ENST00000506611 SLF2Q8IX21 1173 aa10.68□□□□□ -0.7
TRIO-208ENST00000506611 NLRP7Q8WX94 980 aa10.68□□□□□ -0.7
TRIO-208ENST00000506611 OATP04181 439 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms