RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 BCORL1Q5H9F3 1711 aa10.3□□□□□ -0.76
TNPO1-204ENST00000506351 TET3O43151 1660 aa10.3□□□□□ -0.76
TNPO1-204ENST00000506351 SPATA31E1Q6ZUB1 1445 aa10.3□□□□□ -0.76
TNPO1-204ENST00000506351 PLA2R1Q13018 1463 aa10.28□□□□□ -0.76
TNPO1-204ENST00000506351 WASHC2AQ641Q2 1341 aa10.28□□□□□ -0.76
TNPO1-204ENST00000506351 VWDEQ8N2E2 1590 aa10.27□□□□□ -0.76
TNPO1-204ENST00000506351 MROH1Q8NDA8 1641 aa10.27□□□□□ -0.77
TNPO1-204ENST00000506351 ATP10AO60312 1499 aa10.27□□□□□ -0.77
TNPO1-204ENST00000506351 SPAG9O60271 1321 aaKnown RBP10.27□□□□□ -0.77
TNPO1-204ENST00000506351 CCDC144AA2RUR9 1427 aa10.27□□□□□ -0.77
TNPO1-204ENST00000506351 CNTLNQ9NXG0 1405 aa10.27□□□□□ -0.77
TNPO1-204ENST00000506351 PRDM15P57071 1507 aaPredicted RBP10.27□□□□□ -0.77
TNPO1-204ENST00000506351 LAMC1P11047 1609 aa10.26□□□□□ -0.77
TNPO1-204ENST00000506351 CCDC7Q96M83 1385 aa10.26□□□□□ -0.77
TNPO1-204ENST00000506351 SCAPERQ9BY12 1400 aa10.25□□□□□ -0.77
TNPO1-204ENST00000506351 RNF17Q9BXT8 1623 aaKnown RBP10.25□□□□□ -0.77
TNPO1-204ENST00000506351 TRPM2O94759 1503 aa10.25□□□□□ -0.77
TNPO1-204ENST00000506351 GTF3C3Q9Y5Q9 886 aa10.25□□□□□ -0.77
TNPO1-204ENST00000506351 HECW2Q9P2P5 1572 aa10.24□□□□□ -0.77
TNPO1-204ENST00000506351 ANP32CO43423 234 aa10.24□□□□□ -0.77
TNPO1-204ENST00000506351 MAP3K4Q9Y6R4 1608 aa10.24□□□□□ -0.77
TNPO1-204ENST00000506351 AFAP1Q8N556 730 aa10.24□□□□□ -0.77
TNPO1-204ENST00000506351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.24□□□□□ -0.774e-9■■□□□ 12.1
TNPO1-204ENST00000506351 A2MP01023 1474 aa10.24□□□□□ -0.77
TNPO1-204ENST00000506351 ZNF518AQ6AHZ1 1483 aa10.24□□□□□ -0.77
TNPO1-204ENST00000506351 USP47Q96K76 1375 aa10.24□□□□□ -0.77
TNPO1-204ENST00000506351 CLTCL1P53675 1640 aa10.24□□□□□ -0.77
TNPO1-204ENST00000506351 CCER2I3L3R5 266 aa10.23□□□□□ -0.77
TNPO1-204ENST00000506351 RIMBP3CA6NJZ7 1639 aa10.23□□□□□ -0.77
TNPO1-204ENST00000506351 RIMBP3BA6NNM3 1639 aa10.23□□□□□ -0.77
TNPO1-204ENST00000506351 RIMBP3Q9UFD9 1639 aa10.23□□□□□ -0.77
TNPO1-204ENST00000506351 NPM1P06748 294 aaKnown RBP eCLIP10.23□□□□□ -0.77
TNPO1-204ENST00000506351 PRAG1Q86YV5 1406 aa10.22□□□□□ -0.77
TNPO1-204ENST00000506351 ABCA6Q8N139 1617 aa10.22□□□□□ -0.77
TNPO1-204ENST00000506351 C11orf95C9JLR9 678 aaPredicted RBP10.22□□□□□ -0.77
TNPO1-204ENST00000506351 ZNF326Q5BKZ1 582 aaKnown RBP10.22□□□□□ -0.77
TNPO1-204ENST00000506351 CD109Q6YHK3 1445 aa10.22□□□□□ -0.77
TNPO1-204ENST00000506351 POGZQ7Z3K3 1410 aa10.22□□□□□ -0.77
TNPO1-204ENST00000506351 RICTORQ6R327 1708 aa10.22□□□□□ -0.77
TNPO1-204ENST00000506351 PPRC1Q5VV67 1664 aaKnown RBP10.21□□□□□ -0.78
TNPO1-204ENST00000506351 MADDQ8WXG6 1647 aa10.21□□□□□ -0.78
TNPO1-204ENST00000506351 KIF1BO60333 1816 aa10.21□□□□□ -0.78
TNPO1-204ENST00000506351 FRMPD1Q5SYB0 1578 aa10.2□□□□□ -0.78
TNPO1-204ENST00000506351 EFCAB6Q5THR3 1501 aa10.2□□□□□ -0.78
TNPO1-204ENST00000506351 KIF7Q2M1P5 1343 aa10.2□□□□□ -0.78
TNPO1-204ENST00000506351 IFT172Q9UG01 1749 aa10.2□□□□□ -0.78
TNPO1-204ENST00000506351 DHX29Q7Z478 1369 aaKnown RBP10.19□□□□□ -0.78
TNPO1-204ENST00000506351 GLI2P10070 1586 aa10.19□□□□□ -0.78
TNPO1-204ENST00000506351 NEURL4Q96JN8 1562 aa10.19□□□□□ -0.78
TNPO1-204ENST00000506351 DCAF11Q8TEB1 546 aa10.19□□□□□ -0.78
TNPO1-204ENST00000506351 NEO1Q92859 1461 aa10.19□□□□□ -0.78
TNPO1-204ENST00000506351 PTPRTO14522 1441 aa10.19□□□□□ -0.78
TNPO1-204ENST00000506351 LMTK2Q8IWU2 1503 aa10.18□□□□□ -0.78
TNPO1-204ENST00000506351 MROH2AA6NES4 1674 aa10.18□□□□□ -0.78
TNPO1-204ENST00000506351 IQGAP1P46940 1657 aa10.18□□□□□ -0.78
TNPO1-204ENST00000506351 MLH3Q9UHC1 1453 aa10.18□□□□□ -0.78
TNPO1-204ENST00000506351 KANK1Q14678 1352 aa10.17□□□□□ -0.78
TNPO1-204ENST00000506351 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
TNPO1-204ENST00000506351 ROCK2O75116 1388 aaKnown RBP10.17□□□□□ -0.78
TNPO1-204ENST00000506351 KIAA1210Q9ULL0 1709 aa10.17□□□□□ -0.78
TNPO1-204ENST00000506351 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
TNPO1-204ENST00000506351 DIP2CQ9Y2E4 1556 aa10.16□□□□□ -0.78
TNPO1-204ENST00000506351 CARD11Q9BXL7 1154 aa10.16□□□□□ -0.78
TNPO1-204ENST00000506351 DIP2BQ9P265 1576 aa10.15□□□□□ -0.78
TNPO1-204ENST00000506351 CAMSAP1Q5T5Y3 1602 aa10.15□□□□□ -0.78
TNPO1-204ENST00000506351 ARID4BQ4LE39 1312 aaPredicted RBP10.15□□□□□ -0.78
TNPO1-204ENST00000506351 MYT1LQ9UL68 1186 aa10.15□□□□□ -0.79
TNPO1-204ENST00000506351 CFAP65Q6ZU64 1925 aaKnown RBP10.14□□□□□ -0.79
TNPO1-204ENST00000506351 ZC3H13Q5T200 1668 aaKnown RBP10.14□□□□□ -0.79
TNPO1-204ENST00000506351 KIF3BO15066 747 aa10.14□□□□□ -0.79
TNPO1-204ENST00000506351 TSPOAP1O95153 1857 aa10.13□□□□□ -0.79
TNPO1-204ENST00000506351 UGGT1Q9NYU2 1555 aa10.13□□□□□ -0.79
TNPO1-204ENST00000506351 RGL3Q3MIN7 710 aa10.13□□□□□ -0.79
TNPO1-204ENST00000506351 SIGLEC1Q9BZZ2 1709 aa10.12□□□□□ -0.79
TNPO1-204ENST00000506351 PPLO60437 1756 aa10.12□□□□□ -0.79
TNPO1-204ENST00000506351 COL17A1Q9UMD9 1497 aaPredicted RBP10.11□□□□□ -0.79
TNPO1-204ENST00000506351 ABCC3O15438 1527 aa10.11□□□□□ -0.79
TNPO1-204ENST00000506351 PRKRIP1Q9H875 184 aaPredicted RBP10.11□□□□□ -0.79
TNPO1-204ENST00000506351 ADGRB3O60242 1522 aa10.11□□□□□ -0.79
TNPO1-204ENST00000506351 ZMYM4Q5VZL5 1548 aa10.11□□□□□ -0.79
TNPO1-204ENST00000506351 MYOM2P54296 1465 aa10.1□□□□□ -0.79
TNPO1-204ENST00000506351 ST20-MTHFSA0A0A6YYL1 179 aa10.1□□□□□ -0.79
TNPO1-204ENST00000506351 KIF13AQ9H1H9 1805 aa10.09□□□□□ -0.79
TNPO1-204ENST00000506351 PIK3C2BO00750 1634 aa10.09□□□□□ -0.79
TNPO1-204ENST00000506351 NBPF1Q3BBV0 1214 aa10.09□□□□□ -0.79
TNPO1-204ENST00000506351 CYB5RLQ6IPT4 315 aa10.07□□□□□ -0.8
TNPO1-204ENST00000506351 POLR3GLQ9BT43 218 aa10.07□□□□□ -0.8
TNPO1-204ENST00000506351 NPATQ14207 1427 aa10.07□□□□□ -0.8
TNPO1-204ENST00000506351 MYOM1P52179 1685 aa10.06□□□□□ -0.8
TNPO1-204ENST00000506351 SYNMO15061 1565 aa10.06□□□□□ -0.8
TNPO1-204ENST00000506351 MYO3AQ8NEV4 1616 aa10.06□□□□□ -0.8
TNPO1-204ENST00000506351 MYO5BQ9ULV0 1848 aa10.06□□□□□ -0.8
TNPO1-204ENST00000506351 CCDC184Q52MB2 194 aa10.06□□□□□ -0.8
TNPO1-204ENST00000506351 PREX1Q8TCU6 1659 aa10.05□□□□□ -0.8
TNPO1-204ENST00000506351 STAC3Q96MF2 364 aa10.05□□□□□ -0.8
TNPO1-204ENST00000506351 NRXN1Q9ULB1 1477 aa10.05□□□□□ -0.8
TNPO1-204ENST00000506351 RAPGEF3O95398 923 aa10.05□□□□□ -0.8
TNPO1-204ENST00000506351 YEATS2Q9ULM3 1422 aa10.05□□□□□ -0.8
TNPO1-204ENST00000506351 KDM5AP29375 1690 aaKnown RBP10.05□□□□□ -0.8
TNPO1-204ENST00000506351 SCAF11Q99590 1463 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms