RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 VPS9D1Q9Y2B5 631 aa7.49□□□□□ -1.21
RFC1-209ENST00000504974 PHF14O94880 888 aa7.48□□□□□ -1.21
RFC1-209ENST00000504974 NBR1Q14596 966 aa7.48□□□□□ -1.21
RFC1-209ENST00000504974 PDIA6Q15084 440 aa7.48□□□□□ -1.21
RFC1-209ENST00000504974 TSR1Q2NL82 804 aaKnown RBP7.48□□□□□ -1.21
RFC1-209ENST00000504974 TYW1BQ6NUM6 668 aa7.48□□□□□ -1.21
RFC1-209ENST00000504974 ZBED2Q9BTP6 218 aa7.47□□□□□ -1.21
RFC1-209ENST00000504974 C6orf132Q5T0Z8 1188 aa7.46□□□□□ -1.22
RFC1-209ENST00000504974 MLLT3P42568 568 aaPredicted RBP7.45□□□□□ -1.22
RFC1-209ENST00000504974 TK2O00142 265 aa7.44□□□□□ -1.22
RFC1-209ENST00000504974 PTGER2P43116 358 aa7.44□□□□□ -1.22
RFC1-209ENST00000504974 KCTD12Q96CX2 325 aaKnown RBP7.44□□□□□ -1.22
RFC1-209ENST00000504974 KCNH8Q96L42 1107 aa7.44□□□□□ -1.22
RFC1-209ENST00000504974 MAP3K7O43318 606 aa7.43□□□□□ -1.22
RFC1-209ENST00000504974 SPDYE16A6NNV3 312 aaPredicted RBP7.42□□□□□ -1.22
RFC1-209ENST00000504974 OSBPP22059 807 aa7.42□□□□□ -1.22
RFC1-209ENST00000504974 P3H3Q8IVL6 736 aa7.42□□□□□ -1.22
RFC1-209ENST00000504974 EPAS1Q99814 870 aa7.42□□□□□ -1.22
RFC1-209ENST00000504974 CDHR5Q9HBB8 845 aa7.42□□□□□ -1.22
RFC1-209ENST00000504974 PPP1R3GB7ZBB8 358 aa7.41□□□□□ -1.22
RFC1-209ENST00000504974 BHMG1C9JSJ3 638 aaPredicted RBP7.41□□□□□ -1.22
RFC1-209ENST00000504974 EN1Q05925 392 aaPredicted RBP7.41□□□□□ -1.22
RFC1-209ENST00000504974 FBXW7Q969H0 707 aa7.41□□□□□ -1.22
RFC1-209ENST00000504974 ARIH1Q9Y4X5 557 aaPredicted RBP7.41□□□□□ -1.22
RFC1-209ENST00000504974 C3orf80F5H4A9 247 aa7.4□□□□□ -1.22
RFC1-209ENST00000504974 STAC3Q96MF2 364 aa7.4□□□□□ -1.22
RFC1-209ENST00000504974 KIAA1468Q9P260 1216 aa7.4□□□□□ -1.22
RFC1-209ENST00000504974 SEPT9Q9UHD8 586 aaPredicted RBP7.4□□□□□ -1.22
RFC1-209ENST00000504974 PTPN5P54829 565 aa7.39□□□□□ -1.23
RFC1-209ENST00000504974 FAM198AQ9UFP1 575 aa7.39□□□□□ -1.23
RFC1-209ENST00000504974 SEMA3EO15041 775 aa7.38□□□□□ -1.23
RFC1-209ENST00000504974 SLC4A5Q9BY07 1137 aa7.38□□□□□ -1.23
RFC1-209ENST00000504974 TSKSQ9UJT2 592 aa7.38□□□□□ -1.23
RFC1-209ENST00000504974 SMAPO00193 183 aa7.37□□□□□ -1.23
RFC1-209ENST00000504974 MRPL50Q8N5N7 158 aaKnown RBP7.37□□□□□ -1.23
RFC1-209ENST00000504974 ARHGEF1Q92888 912 aaKnown RBP7.37□□□□□ -1.23
RFC1-209ENST00000504974 TRIM6-TRIM34B2RNG4 842 aa7.35□□□□□ -1.23
RFC1-209ENST00000504974 WNT2BQ93097 391 aa7.35□□□□□ -1.23
RFC1-209ENST00000504974 GOLGA8CPA6NN73 597 aa7.34□□□□□ -1.23
RFC1-209ENST00000504974 RABGEF1Q9UJ41 708 aa7.34□□□□□ -1.23
RFC1-209ENST00000504974 PRKCSHP14314 528 aaPredicted RBP7.33□□□□□ -1.24
RFC1-209ENST00000504974 BCAMP50895 628 aa7.33□□□□□ -1.24
RFC1-209ENST00000504974 TPRNQ4KMQ1 711 aa7.33□□□□□ -1.24
RFC1-209ENST00000504974 CDCA7LQ96GN5 454 aa7.33□□□□□ -1.24
RFC1-209ENST00000504974 NPDC1Q9NQX5 325 aaPredicted RBP7.33□□□□□ -1.24
RFC1-209ENST00000504974 THSD4Q6ZMP0 1018 aa7.32□□□□□ -1.24
RFC1-209ENST00000504974 PRSS12P56730 875 aa7.31□□□□□ -1.24
RFC1-209ENST00000504974 NBPF3Q9H094 633 aa7.31□□□□□ -1.24
RFC1-209ENST00000504974 HCSTQ9UBK5 93 aa7.31□□□□□ -1.24
RFC1-209ENST00000504974 FAM161AQ3B820 660 aa7.3□□□□□ -1.24
RFC1-209ENST00000504974 ZFRQ96KR1 1074 aaKnown RBP7.3□□□□□ -1.24
RFC1-209ENST00000504974 RBM26Q5T8P6 1007 aaKnown RBP7.29□□□□□ -1.24
RFC1-209ENST00000504974 PADI6Q6TGC4 694 aa7.29□□□□□ -1.24
RFC1-209ENST00000504974 NUTM2FA1L443 756 aa7.28□□□□□ -1.24
RFC1-209ENST00000504974 NUDT18Q6ZVK8 323 aa7.27□□□□□ -1.25
RFC1-209ENST00000504974 PACS2Q86VP3 889 aa7.27□□□□□ -1.25
RFC1-209ENST00000504974 PLA2G2EQ9NZK7 142 aa7.27□□□□□ -1.25
RFC1-209ENST00000504974 PNMA3Q9UL41 463 aa7.27□□□□□ -1.25
RFC1-209ENST00000504974 TULP1O00294 542 aaPredicted RBP7.26□□□□□ -1.25
RFC1-209ENST00000504974 ANKK1Q8NFD2 765 aa7.26□□□□□ -1.25
RFC1-209ENST00000504974 TATDN2Q93075 761 aa7.26□□□□□ -1.25
RFC1-209ENST00000504974 WBP1LQ9NX94 342 aa7.26□□□□□ -1.25
RFC1-209ENST00000504974 TESPA1A2RU30 521 aaPredicted RBP7.25□□□□□ -1.25
RFC1-209ENST00000504974 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
RFC1-209ENST00000504974 SAMD7Q7Z3H4 446 aa7.25□□□□□ -1.25
RFC1-209ENST00000504974 SOWAHBA6NEL2 793 aa7.24□□□□□ -1.25
RFC1-209ENST00000504974 ONECUT3O60422 494 aaPredicted RBP7.24□□□□□ -1.25
RFC1-209ENST00000504974 FECHP22830 423 aa7.23□□□□□ -1.25
RFC1-209ENST00000504974 PTGDRQ13258 359 aa7.23□□□□□ -1.25
RFC1-209ENST00000504974 LAPTM4BQ86VI4 370 aa7.23□□□□□ -1.25
RFC1-209ENST00000504974 TTC13Q8NBP0 860 aa7.23□□□□□ -1.25
RFC1-209ENST00000504974 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.22□□□□□ -1.25
RFC1-209ENST00000504974 HPS5Q9UPZ3 1129 aa7.22□□□□□ -1.25
RFC1-209ENST00000504974 LMOD2Q6P5Q4 547 aa7.21□□□□□ -1.26
RFC1-209ENST00000504974 CERKQ8TCT0 537 aa7.21□□□□□ -1.26
RFC1-209ENST00000504974 RNF40O75150 1001 aa7.2□□□□□ -1.26
RFC1-209ENST00000504974 LRCH3Q96II8 777 aa7.2□□□□□ -1.26
RFC1-209ENST00000504974 NBPF26B4DH59 902 aa7.19□□□□□ -1.26
RFC1-209ENST00000504974 SWT1Q5T5J6 900 aaKnown RBP7.19□□□□□ -1.26
RFC1-209ENST00000504974 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.19□□□□□ -1.26
RFC1-209ENST00000504974 SMYD5Q6GMV2 418 aa7.18□□□□□ -1.26
RFC1-209ENST00000504974 NLRP7Q8WX94 980 aa7.18□□□□□ -1.26
RFC1-209ENST00000504974 EYA1Q99502 592 aa7.18□□□□□ -1.26
RFC1-209ENST00000504974 TSR3Q9UJK0 312 aaKnown RBP7.17□□□□□ -1.26
RFC1-209ENST00000504974 ADGRG1Q9Y653 693 aa7.17□□□□□ -1.26
RFC1-209ENST00000504974 GPR37O15354 613 aa7.16□□□□□ -1.26
RFC1-209ENST00000504974 FCHSD2O94868 740 aa7.16□□□□□ -1.26
RFC1-209ENST00000504974 PPP4CP60510 307 aa7.16□□□□□ -1.26
RFC1-209ENST00000504974 RBM27Q9P2N5 1060 aaKnown RBP7.16□□□□□ -1.26
RFC1-209ENST00000504974 APLP1P51693 650 aa7.14□□□□□ -1.27
RFC1-209ENST00000504974 RCCD1A6NED2 376 aa7.13□□□□□ -1.27
RFC1-209ENST00000504974 ZNF516Q92618 1163 aa7.12□□□□□ -1.27
RFC1-209ENST00000504974 PHOX2BQ99453 314 aa7.11□□□□□ -1.27
RFC1-209ENST00000504974 GNPATO15228 680 aa7.1□□□□□ -1.27
RFC1-209ENST00000504974 GPIHBP1Q8IV16 184 aa7.1□□□□□ -1.27
RFC1-209ENST00000504974 HDGFP51858 240 aaKnown RBP7.09□□□□□ -1.27
RFC1-209ENST00000504974 COPS2P61201 443 aa7.09□□□□□ -1.27
RFC1-209ENST00000504974 HIC1Q14526 733 aa7.09□□□□□ -1.27
RFC1-209ENST00000504974 RBM46Q8TBY0 533 aaKnown RBP7.09□□□□□ -1.27
RFC1-209ENST00000504974 PXYLP1Q8TE99 480 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms