RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 WRNQ14191 1432 aaPredicted RBP eCLIP8.77□□□□□ -1
SNX25-203ENST00000504959 SPDYE16A6NNV3 312 aaPredicted RBP8.77□□□□□ -1.01
SNX25-203ENST00000504959 ILDR1Q86SU0 546 aaPredicted RBP8.77□□□□□ -1.01
SNX25-203ENST00000504959 CCDC102AQ96A19 550 aa8.77□□□□□ -1.01
SNX25-203ENST00000504959 APBB1O00213 710 aa8.77□□□□□ -1.01
SNX25-203ENST00000504959 PARP9Q8IXQ6 854 aa8.77□□□□□ -1.01
SNX25-203ENST00000504959 L3MBTL3Q96JM7 780 aaPredicted RBP8.77□□□□□ -1.01
SNX25-203ENST00000504959 EEA1Q15075 1411 aa8.76□□□□□ -1.01
SNX25-203ENST00000504959 HMGXB3Q12766 1538 aa8.76□□□□□ -1.01
SNX25-203ENST00000504959 ST18O60284 1047 aa8.75□□□□□ -1.01
SNX25-203ENST00000504959 DDRGK1Q96HY6 314 aa8.75□□□□□ -1.01
SNX25-203ENST00000504959 MINK1Q8N4C8 1332 aaPredicted RBP8.75□□□□□ -1.01
SNX25-203ENST00000504959 RANGAP1P46060 587 aaPredicted RBP8.74□□□□□ -1.01
SNX25-203ENST00000504959 SOGA1O94964 1423 aa8.74□□□□□ -1.01
SNX25-203ENST00000504959 MAP2K5Q13163 448 aa8.74□□□□□ -1.01
SNX25-203ENST00000504959 SYNJ1O43426 1573 aa8.74□□□□□ -1.01
SNX25-203ENST00000504959 NCAPD3P42695 1498 aa8.73□□□□□ -1.01
SNX25-203ENST00000504959 IRF6O14896 467 aa8.73□□□□□ -1.01
SNX25-203ENST00000504959 AMHR2Q16671 573 aa8.73□□□□□ -1.01
SNX25-203ENST00000504959 ONECUT3O60422 494 aaPredicted RBP8.72□□□□□ -1.01
SNX25-203ENST00000504959 C3orf67Q6ZVT6 689 aa8.72□□□□□ -1.01
SNX25-203ENST00000504959 NUTM2FA1L443 756 aa8.72□□□□□ -1.01
SNX25-203ENST00000504959 GRXCR2A6NFK2 248 aa8.72□□□□□ -1.01
SNX25-203ENST00000504959 SNPHO15079 494 aa8.72□□□□□ -1.01
SNX25-203ENST00000504959 FECHP22830 423 aa8.72□□□□□ -1.01
SNX25-203ENST00000504959 FLIIQ13045 1269 aa8.7□□□□□ -1.02
SNX25-203ENST00000504959 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
SNX25-203ENST00000504959 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
SNX25-203ENST00000504959 FOXK1P85037 733 aa8.7□□□□□ -1.02
SNX25-203ENST00000504959 CLUAP1Q96AJ1 413 aa8.68□□□□□ -1.02
SNX25-203ENST00000504959 GNPATO15228 680 aa8.68□□□□□ -1.02
SNX25-203ENST00000504959 PPARGC1BQ86YN6 1023 aaKnown RBP8.68□□□□□ -1.02
SNX25-203ENST00000504959 TMEM121BQ9BXQ6 578 aaPredicted RBP8.68□□□□□ -1.02
SNX25-203ENST00000504959 TOP2BQ02880 1626 aa8.68□□□□□ -1.02
SNX25-203ENST00000504959 PRDM2Q13029 1718 aa8.68□□□□□ -1.02
SNX25-203ENST00000504959 OSBPP22059 807 aa8.67□□□□□ -1.02
SNX25-203ENST00000504959 GOLGA3Q08378 1498 aa8.67□□□□□ -1.02
SNX25-203ENST00000504959 CDAN1Q8IWY9 1227 aa8.67□□□□□ -1.02
SNX25-203ENST00000504959 TNIKQ9UKE5 1360 aa8.67□□□□□ -1.02
SNX25-203ENST00000504959 BIVM-ERCC5R4GMW8 1640 aa8.66□□□□□ -1.02
SNX25-203ENST00000504959 CEP162Q5TB80 1403 aa8.66□□□□□ -1.02
SNX25-203ENST00000504959 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
SNX25-203ENST00000504959 NPM2Q86SE8 214 aaKnown RBP8.66□□□□□ -1.02
SNX25-203ENST00000504959 MICALL2Q8IY33 904 aa8.66□□□□□ -1.02
SNX25-203ENST00000504959 CCDC82Q8N4S0 544 aa8.66□□□□□ -1.02
SNX25-203ENST00000504959 TMC2Q8TDI7 906 aa8.66□□□□□ -1.02
SNX25-203ENST00000504959 PLPP6Q8IY26 295 aa8.65□□□□□ -1.02
SNX25-203ENST00000504959 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
SNX25-203ENST00000504959 BOLA1Q9Y3E2 137 aa8.65□□□□□ -1.02
SNX25-203ENST00000504959 KIF21BO75037 1637 aa8.65□□□□□ -1.02
SNX25-203ENST00000504959 CEP164Q9UPV0 1460 aa8.65□□□□□ -1.03
SNX25-203ENST00000504959 MS4A1P11836 297 aa8.64□□□□□ -1.03
SNX25-203ENST00000504959 HIC1Q14526 733 aa8.64□□□□□ -1.03
SNX25-203ENST00000504959 G3V3G9 751 aa8.63□□□□□ -1.03
SNX25-203ENST00000504959 GIGYF2Q6Y7W6 1299 aaKnown RBP8.63□□□□□ -1.03
SNX25-203ENST00000504959 TRAK2O60296 914 aa8.62□□□□□ -1.03
SNX25-203ENST00000504959 MAP3K9P80192 1104 aa8.62□□□□□ -1.03
SNX25-203ENST00000504959 REPIN1Q9BWE0 567 aaKnown RBP8.62□□□□□ -1.03
SNX25-203ENST00000504959 CFTRP13569 1480 aa8.62□□□□□ -1.03
SNX25-203ENST00000504959 C2orf72A6NCS6 295 aa8.62□□□□□ -1.03
SNX25-203ENST00000504959 A6NJR5 290 aa8.62□□□□□ -1.03
SNX25-203ENST00000504959 FCHSD2O94868 740 aa8.62□□□□□ -1.03
SNX25-203ENST00000504959 PRIM1P49642 420 aaKnown RBP8.62□□□□□ -1.03
SNX25-203ENST00000504959 DDX12PQ92771 950 aa8.62□□□□□ -1.03
SNX25-203ENST00000504959 PDIA4P13667 645 aaKnown RBP8.61□□□□□ -1.03
SNX25-203ENST00000504959 ZEB1P37275 1124 aaPredicted RBP8.61□□□□□ -1.03
SNX25-203ENST00000504959 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
SNX25-203ENST00000504959 UPF1Q92900 1129 aaKnown RBP eCLIP8.6□□□□□ -1.03
SNX25-203ENST00000504959 KIF3CO14782 793 aa8.6□□□□□ -1.03
SNX25-203ENST00000504959 MCM6Q14566 821 aa8.6□□□□□ -1.03
SNX25-203ENST00000504959 MARVELD3Q96A59 401 aa8.6□□□□□ -1.03
SNX25-203ENST00000504959 PCMTD1Q96MG8 357 aaPredicted RBP8.59□□□□□ -1.03
SNX25-203ENST00000504959 CUX1P39880 1505 aa8.58□□□□□ -1.04
SNX25-203ENST00000504959 PTGDRQ13258 359 aa8.58□□□□□ -1.04
SNX25-203ENST00000504959 PTGER2P43116 358 aa8.56□□□□□ -1.04
SNX25-203ENST00000504959 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
SNX25-203ENST00000504959 RAPGEF2Q9Y4G8 1499 aa8.56□□□□□ -1.04
SNX25-203ENST00000504959 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
SNX25-203ENST00000504959 CADPSQ9ULU8 1353 aa8.55□□□□□ -1.04
SNX25-203ENST00000504959 CLIP1P30622 1438 aa8.55□□□□□ -1.04
SNX25-203ENST00000504959 HOXB3P14651 431 aaPredicted RBP8.55□□□□□ -1.04
SNX25-203ENST00000504959 OXER1Q8TDS5 423 aa8.55□□□□□ -1.04
SNX25-203ENST00000504959 EMP3P54852 163 aa8.54□□□□□ -1.04
SNX25-203ENST00000504959 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
SNX25-203ENST00000504959 ZNF777Q9ULD5 760 aaPredicted RBP8.54□□□□□ -1.04
SNX25-203ENST00000504959 KIF27Q86VH2 1401 aa8.54□□□□□ -1.04
SNX25-203ENST00000504959 SH3D19Q5HYK7 790 aa8.53□□□□□ -1.04
SNX25-203ENST00000504959 ERICH3Q5RHP9 1530 aa8.53□□□□□ -1.04
SNX25-203ENST00000504959 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.05
SNX25-203ENST00000504959 FNBP4Q8N3X1 1017 aaPredicted RBP8.51□□□□□ -1.05
SNX25-203ENST00000504959 PHOX2BQ99453 314 aa8.51□□□□□ -1.05
SNX25-203ENST00000504959 TMUB1Q9BVT8 246 aa8.51□□□□□ -1.05
SNX25-203ENST00000504959 CCDC9Q9Y3X0 531 aaKnown RBP8.51□□□□□ -1.05
SNX25-203ENST00000504959 POTEB3A0JP26 581 aa8.5□□□□□ -1.05
SNX25-203ENST00000504959 POTEBQ6S5H4 581 aa8.5□□□□□ -1.05
SNX25-203ENST00000504959 TMEM92Q6UXU6 159 aa8.5□□□□□ -1.05
SNX25-203ENST00000504959 CDHR5Q9HBB8 845 aa8.5□□□□□ -1.05
SNX25-203ENST00000504959 LAMC3Q9Y6N6 1575 aa8.49□□□□□ -1.05
SNX25-203ENST00000504959 PRXQ9BXM0 1461 aa8.49□□□□□ -1.05
SNX25-203ENST00000504959 VPS8Q8N3P4 1428 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms