RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 ZMYND15Q9H091 742 aa11.07□□□□□ -0.64
CCDC149-204ENST00000504487 KTN1Q86UP2 1357 aaKnown RBP11.06□□□□□ -0.64
CCDC149-204ENST00000504487 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
CCDC149-204ENST00000504487 NAIPQ13075 1403 aa11.06□□□□□ -0.64
CCDC149-204ENST00000504487 LAMC3Q9Y6N6 1575 aa11.06□□□□□ -0.64
CCDC149-204ENST00000504487 AFAP1Q8N556 730 aa11.06□□□□□ -0.64
CCDC149-204ENST00000504487 RNF123Q5XPI4 1314 aa11.05□□□□□ -0.64
CCDC149-204ENST00000504487 ST20-MTHFSA0A0A6YYL1 179 aa11.05□□□□□ -0.64
CCDC149-204ENST00000504487 MYH16Q9H6N6 1097 aa11.05□□□□□ -0.64
CCDC149-204ENST00000504487 IFT140Q96RY7 1462 aa11.05□□□□□ -0.64
CCDC149-204ENST00000504487 ROCK2O75116 1388 aaKnown RBP11.04□□□□□ -0.64
CCDC149-204ENST00000504487 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
CCDC149-204ENST00000504487 SPAG9O60271 1321 aaKnown RBP11.04□□□□□ -0.64
CCDC149-204ENST00000504487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC149-204ENST00000504487 MAP3K1Q13233 1512 aa11.03□□□□□ -0.64
CCDC149-204ENST00000504487 ANKRD30AQ9BXX3 1397 aa11.02□□□□□ -0.64
CCDC149-204ENST00000504487 NCOA2Q15596 1464 aa11.02□□□□□ -0.65
CCDC149-204ENST00000504487 CASKIN1Q8WXD9 1431 aa11.02□□□□□ -0.65
CCDC149-204ENST00000504487 CDK13Q14004 1512 aaKnown RBP11.01□□□□□ -0.65
CCDC149-204ENST00000504487 BRD4O60885 1362 aaPredicted RBP11.01□□□□□ -0.65
CCDC149-204ENST00000504487 MYOM3Q5VTT5 1437 aa11.01□□□□□ -0.65
CCDC149-204ENST00000504487 STK26Q9P289 416 aa11.01□□□□□ -0.65
CCDC149-204ENST00000504487 C20orf194Q5TEA3 1177 aa11□□□□□ -0.65
CCDC149-204ENST00000504487 ARID3AQ99856 593 aa11□□□□□ -0.65
CCDC149-204ENST00000504487 PTPRKQ15262 1439 aa11□□□□□ -0.65
CCDC149-204ENST00000504487 RRP9O43818 475 aaKnown RBP11□□□□□ -0.65
CCDC149-204ENST00000504487 PLB1Q6P1J6 1458 aa10.99□□□□□ -0.65
CCDC149-204ENST00000504487 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
CCDC149-204ENST00000504487 RRAGDQ9NQL2 400 aaPredicted RBP10.99□□□□□ -0.65
CCDC149-204ENST00000504487 KNSTRNQ9Y448 316 aa10.98□□□□□ -0.65
CCDC149-204ENST00000504487 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
CCDC149-204ENST00000504487 NEUROD2Q15784 382 aa10.97□□□□□ -0.65
CCDC149-204ENST00000504487 FYCO1Q9BQS8 1478 aa10.96□□□□□ -0.65
CCDC149-204ENST00000504487 PCF11O94913 1555 aaKnown RBP10.96□□□□□ -0.65
CCDC149-204ENST00000504487 MSNP26038 577 aaKnown RBP10.96□□□□□ -0.65
CCDC149-204ENST00000504487 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.66
CCDC149-204ENST00000504487 HSCBQ8IWL3 235 aa10.96□□□□□ -0.66
CCDC149-204ENST00000504487 PTPN23Q9H3S7 1636 aa10.96□□□□□ -0.66
CCDC149-204ENST00000504487 NCLP19338 710 aaKnown RBP10.95□□□□□ -0.66
CCDC149-204ENST00000504487 PODXL2Q9NZ53 605 aa10.95□□□□□ -0.66
CCDC149-204ENST00000504487 ZBTB7CA1YPR0 619 aa10.94□□□□□ -0.66
CCDC149-204ENST00000504487 CCDC146Q8IYE0 955 aa10.94□□□□□ -0.66
CCDC149-204ENST00000504487 GOLGA6L22H0YM25 854 aa10.94□□□□□ -0.66
CCDC149-204ENST00000504487 MRE11P49959 708 aa10.94□□□□□ -0.66
CCDC149-204ENST00000504487 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
CCDC149-204ENST00000504487 C8orf34Q49A92 452 aa10.93□□□□□ -0.66
CCDC149-204ENST00000504487 MAPK8IP3Q9UPT6 1336 aa10.93□□□□□ -0.66
CCDC149-204ENST00000504487 SOX12O15370 315 aa10.93□□□□□ -0.66
CCDC149-204ENST00000504487 C14orf37Q86TY3 774 aa10.93□□□□□ -0.66
CCDC149-204ENST00000504487 PANK3Q9H999 370 aa10.93□□□□□ -0.66
CCDC149-204ENST00000504487 TRAK2O60296 914 aa10.93□□□□□ -0.66
CCDC149-204ENST00000504487 HSP90AB1P08238 724 aaKnown RBP10.93□□□□□ -0.66
CCDC149-204ENST00000504487 RAPGEF3O95398 923 aa10.92□□□□□ -0.66
CCDC149-204ENST00000504487 COG6Q9Y2V7 657 aa10.92□□□□□ -0.66
CCDC149-204ENST00000504487 ESPNB1AK53 854 aa10.92□□□□□ -0.66
CCDC149-204ENST00000504487 PANK2Q9BZ23 570 aa10.92□□□□□ -0.66
CCDC149-204ENST00000504487 ADAMTS8Q9UP79 889 aa10.92□□□□□ -0.66
CCDC149-204ENST00000504487 GRIN2AQ12879 1464 aa10.92□□□□□ -0.66
CCDC149-204ENST00000504487 KIAA0586Q9BVV6 1533 aa10.92□□□□□ -0.66
CCDC149-204ENST00000504487 DHX29Q7Z478 1369 aaKnown RBP10.92□□□□□ -0.66
CCDC149-204ENST00000504487 XRCC6P12956 609 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC149-204ENST00000504487 NUTM2FA1L443 756 aa10.91□□□□□ -0.66
CCDC149-204ENST00000504487 TMF1P82094 1093 aa10.91□□□□□ -0.66
CCDC149-204ENST00000504487 KANK1Q14678 1352 aa10.9□□□□□ -0.66
CCDC149-204ENST00000504487 ANKRD30BQ9BXX2 1392 aa10.9□□□□□ -0.66
CCDC149-204ENST00000504487 A0A0U1RQG5 324 aaPredicted RBP10.9□□□□□ -0.66
CCDC149-204ENST00000504487 CLCN1P35523 988 aa10.9□□□□□ -0.66
CCDC149-204ENST00000504487 FAM13BQ9NYF5 915 aa10.9□□□□□ -0.66
CCDC149-204ENST00000504487 CHMP5Q9NZZ3 219 aa10.9□□□□□ -0.66
CCDC149-204ENST00000504487 MIA2Q96PC5 1412 aa10.9□□□□□ -0.66
CCDC149-204ENST00000504487 MCM4P33991 863 aa10.9□□□□□ -0.66
CCDC149-204ENST00000504487 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
CCDC149-204ENST00000504487 DDX11L8A8MPP1 907 aa10.89□□□□□ -0.67
CCDC149-204ENST00000504487 CLUAP1Q96AJ1 413 aa10.89□□□□□ -0.67
CCDC149-204ENST00000504487 GBP4Q96PP9 640 aa10.89□□□□□ -0.67
CCDC149-204ENST00000504487 EPRSP07814 1512 aaKnown RBP10.89□□□□□ -0.67
CCDC149-204ENST00000504487 IQGAP2Q13576 1575 aa10.89□□□□□ -0.67
CCDC149-204ENST00000504487 TRAK1Q9UPV9 953 aa10.88□□□□□ -0.67
CCDC149-204ENST00000504487 SYNJ2O15056 1496 aa10.88□□□□□ -0.67
CCDC149-204ENST00000504487 RBM10P98175 930 aaKnown RBP10.88□□□□□ -0.67
CCDC149-204ENST00000504487 DNTTIP2Q5QJE6 756 aaKnown RBP10.88□□□□□ -0.67
CCDC149-204ENST00000504487 FTSJ3Q8IY81 847 aaKnown RBP10.88□□□□□ -0.67
CCDC149-204ENST00000504487 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
CCDC149-204ENST00000504487 PMFBP1Q8TBY8 1022 aa10.88□□□□□ -0.67
CCDC149-204ENST00000504487 GRPEL1Q9HAV7 217 aa10.88□□□□□ -0.67
CCDC149-204ENST00000504487 CGNL1Q0VF96 1302 aa10.87□□□□□ -0.67
CCDC149-204ENST00000504487 APAF1O14727 1248 aa10.87□□□□□ -0.67
CCDC149-204ENST00000504487 BCAR3O75815 825 aa10.87□□□□□ -0.67
CCDC149-204ENST00000504487 TPM2P07951 284 aa10.87□□□□□ -0.67
CCDC149-204ENST00000504487 RPRD2Q5VT52 1461 aaKnown RBP10.87□□□□□ -0.67
CCDC149-204ENST00000504487 ARHGEF11O15085 1522 aa10.87□□□□□ -0.67
CCDC149-204ENST00000504487 SRPK2P78362 688 aaKnown RBP10.86□□□□□ -0.67
CCDC149-204ENST00000504487 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
CCDC149-204ENST00000504487 PANK1Q8TE04 598 aa10.86□□□□□ -0.67
CCDC149-204ENST00000504487 RWDD1Q9H446 243 aaPredicted RBP10.86□□□□□ -0.67
CCDC149-204ENST00000504487 ANKRD50Q9ULJ7 1429 aa10.86□□□□□ -0.67
CCDC149-204ENST00000504487 CENPJQ9HC77 1338 aaPredicted RBP10.86□□□□□ -0.67
CCDC149-204ENST00000504487 EFCAB5A4FU69 1503 aa10.86□□□□□ -0.67
CCDC149-204ENST00000504487 PTMAP06454 111 aaKnown RBP10.86□□□□□ -0.67
CCDC149-204ENST00000504487 LMOD2Q6P5Q4 547 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms