RNA–Protein interactions for RNA: ENST00000504458.1

SERF1A-204, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4 BASIC

Gene SERF1A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-204ENST00000504458 ERICH3Q5RHP9 1530 aa9.31□□□□□ -0.92
SERF1A-204ENST00000504458 CCER1Q8TC90 406 aaPredicted RBP9.3□□□□□ -0.92
SERF1A-204ENST00000504458 CLIP1P30622 1438 aa9.3□□□□□ -0.92
SERF1A-204ENST00000504458 VPS8Q8N3P4 1428 aa9.3□□□□□ -0.92
SERF1A-204ENST00000504458 SYNJ2O15056 1496 aa9.29□□□□□ -0.92
SERF1A-204ENST00000504458 FGD5Q6ZNL6 1462 aa9.29□□□□□ -0.92
SERF1A-204ENST00000504458 MAGI1Q96QZ7 1491 aaPredicted RBP9.29□□□□□ -0.92
SERF1A-204ENST00000504458 SLC34A2O95436 690 aa9.29□□□□□ -0.92
SERF1A-204ENST00000504458 NCKAP5LQ9HCH0 1330 aa9.29□□□□□ -0.92
SERF1A-204ENST00000504458 POTEMA6NI47 508 aa9.28□□□□□ -0.92
SERF1A-204ENST00000504458 DSG2Q14126 1118 aa9.28□□□□□ -0.92
SERF1A-204ENST00000504458 PLPP6Q8IY26 295 aa9.28□□□□□ -0.92
SERF1A-204ENST00000504458 CLASP1Q7Z460 1538 aa9.27□□□□□ -0.93
SERF1A-204ENST00000504458 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
SERF1A-204ENST00000504458 POTEGQ6S5H5 508 aa9.27□□□□□ -0.93
SERF1A-204ENST00000504458 TTBK1Q5TCY1 1321 aaPredicted RBP9.27□□□□□ -0.93
SERF1A-204ENST00000504458 PRDM2Q13029 1718 aa9.26□□□□□ -0.93
SERF1A-204ENST00000504458 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
SERF1A-204ENST00000504458 DDX27Q96GQ7 796 aaKnown RBP9.26□□□□□ -0.93
SERF1A-204ENST00000504458 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
SERF1A-204ENST00000504458 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
SERF1A-204ENST00000504458 CADPS2Q86UW7 1296 aa9.25□□□□□ -0.93
SERF1A-204ENST00000504458 RAPGEF2Q9Y4G8 1499 aa9.24□□□□□ -0.93
SERF1A-204ENST00000504458 EMP3P54852 163 aa9.24□□□□□ -0.93
SERF1A-204ENST00000504458 MFSD10Q14728 455 aa9.24□□□□□ -0.93
SERF1A-204ENST00000504458 GPR153Q6NV75 609 aa9.23□□□□□ -0.93
SERF1A-204ENST00000504458 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
SERF1A-204ENST00000504458 PTCD2Q8WV60 388 aaKnown RBP9.22□□□□□ -0.93
SERF1A-204ENST00000504458 MARVELD3Q96A59 401 aa9.22□□□□□ -0.93
SERF1A-204ENST00000504458 KDM4FA0A1W2PPD8 638 aa9.21□□□□□ -0.94
SERF1A-204ENST00000504458 TBC1D12O60347 775 aa9.21□□□□□ -0.94
SERF1A-204ENST00000504458 PLCB2Q00722 1185 aa9.21□□□□□ -0.94
SERF1A-204ENST00000504458 PCDHGA4Q9Y5G9 962 aa9.21□□□□□ -0.94
SERF1A-204ENST00000504458 CUX1P39880 1505 aa9.21□□□□□ -0.94
SERF1A-204ENST00000504458 ARSIQ5FYB1 569 aa9.2□□□□□ -0.94
SERF1A-204ENST00000504458 JPH4Q96JJ6 628 aa9.2□□□□□ -0.94
SERF1A-204ENST00000504458 PCDH10Q9P2E7 1040 aa9.2□□□□□ -0.94
SERF1A-204ENST00000504458 ERCC6L2Q5T890 1561 aa9.18□□□□□ -0.94
SERF1A-204ENST00000504458 PRG4Q92954 1404 aaPredicted RBP9.18□□□□□ -0.94
SERF1A-204ENST00000504458 CLSPNQ9HAW4 1339 aa9.18□□□□□ -0.94
SERF1A-204ENST00000504458 ERBB3P21860 1342 aa9.17□□□□□ -0.94
SERF1A-204ENST00000504458 GRIN2AQ12879 1464 aa9.16□□□□□ -0.94
SERF1A-204ENST00000504458 FAM205CA6NFA0 338 aa9.16□□□□□ -0.94
SERF1A-204ENST00000504458 OXER1Q8TDS5 423 aa9.16□□□□□ -0.94
SERF1A-204ENST00000504458 WDR70Q9NW82 654 aa9.16□□□□□ -0.94
SERF1A-204ENST00000504458 WDR97A6NE52 1622 aa9.16□□□□□ -0.94
SERF1A-204ENST00000504458 NUDT7P0C024 238 aa9.14□□□□□ -0.95
SERF1A-204ENST00000504458 HS3ST6Q96QI5 342 aa9.14□□□□□ -0.95
SERF1A-204ENST00000504458 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
SERF1A-204ENST00000504458 CEP170Q5SW79 1584 aa9.14□□□□□ -0.95
SERF1A-204ENST00000504458 DIEXFQ68CQ4 756 aaKnown RBP9.13□□□□□ -0.95
SERF1A-204ENST00000504458 UPF1Q92900 1129 aaKnown RBP eCLIP9.13□□□□□ -0.95
SERF1A-204ENST00000504458 KHSRPQ92945 711 aaKnown RBP eCLIP9.13□□□□□ -0.95
SERF1A-204ENST00000504458 MAP3K1Q13233 1512 aa9.13□□□□□ -0.95
SERF1A-204ENST00000504458 PSDA5PKW4 1024 aaPredicted RBP9.12□□□□□ -0.95
SERF1A-204ENST00000504458 ZNF316A6NFI3 1004 aaPredicted RBP9.12□□□□□ -0.95
SERF1A-204ENST00000504458 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
SERF1A-204ENST00000504458 FHAD1B1AJZ9 1412 aa9.12□□□□□ -0.95
SERF1A-204ENST00000504458 ABCA10Q8WWZ4 1543 aa9.11□□□□□ -0.95
SERF1A-204ENST00000504458 MAP3K9P80192 1104 aa9.11□□□□□ -0.95
SERF1A-204ENST00000504458 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
SERF1A-204ENST00000504458 NUP160Q12769 1436 aa9.11□□□□□ -0.95
SERF1A-204ENST00000504458 ABCC10Q5T3U5 1492 aa9.1□□□□□ -0.95
SERF1A-204ENST00000504458 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
SERF1A-204ENST00000504458 RRBP1Q9P2E9 1410 aaKnown RBP9.1□□□□□ -0.95
SERF1A-204ENST00000504458 PBRM1Q86U86 1689 aa9.1□□□□□ -0.95
SERF1A-204ENST00000504458 CENPBP07199 599 aaPredicted RBP9.09□□□□□ -0.95
SERF1A-204ENST00000504458 E2F4Q16254 413 aa9.09□□□□□ -0.95
SERF1A-204ENST00000504458 EMILIN3Q9NT22 766 aa9.09□□□□□ -0.95
SERF1A-204ENST00000504458 IGF1RP08069 1367 aa9.09□□□□□ -0.95
SERF1A-204ENST00000504458 LHX6Q9UPM6 363 aa9.08□□□□□ -0.96
SERF1A-204ENST00000504458 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
SERF1A-204ENST00000504458 POTEB3A0JP26 581 aa9.07□□□□□ -0.96
SERF1A-204ENST00000504458 POTEBQ6S5H4 581 aa9.07□□□□□ -0.96
SERF1A-204ENST00000504458 ACIN1Q9UKV3 1341 aaKnown RBP9.06□□□□□ -0.96
SERF1A-204ENST00000504458 KDM6BO15054 1643 aa9.06□□□□□ -0.96
SERF1A-204ENST00000504458 ZNF687Q8N1G0 1237 aa9.06□□□□□ -0.96
SERF1A-204ENST00000504458 EVI5O60447 810 aa9.05□□□□□ -0.96
SERF1A-204ENST00000504458 HAP1P54257 671 aaPredicted RBP9.05□□□□□ -0.96
SERF1A-204ENST00000504458 ANO8Q9HCE9 1232 aaPredicted RBP9.05□□□□□ -0.96
SERF1A-204ENST00000504458 CARMIL1Q5VZK9 1371 aa9.04□□□□□ -0.96
SERF1A-204ENST00000504458 ABCA5Q8WWZ7 1642 aa9.04□□□□□ -0.96
SERF1A-204ENST00000504458 PTPRGP23470 1445 aa9.04□□□□□ -0.96
SERF1A-204ENST00000504458 ADAMTS12P58397 1594 aa9.03□□□□□ -0.96
SERF1A-204ENST00000504458 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
SERF1A-204ENST00000504458 CCNB3Q8WWL7 1395 aa9.02□□□□□ -0.97
SERF1A-204ENST00000504458 DPYSL4O14531 572 aa9.02□□□□□ -0.97
SERF1A-204ENST00000504458 PPP4R3BQ5MIZ7 849 aa9.02□□□□□ -0.97
SERF1A-204ENST00000504458 DHX57Q6P158 1386 aaKnown RBP9.01□□□□□ -0.97
SERF1A-204ENST00000504458 KIF13AQ9H1H9 1805 aa9.01□□□□□ -0.97
SERF1A-204ENST00000504458 PBX2P40425 430 aa9.01□□□□□ -0.97
SERF1A-204ENST00000504458 ADGRL1O94910 1474 aa9.01□□□□□ -0.97
SERF1A-204ENST00000504458 TIAM1Q13009 1591 aa9□□□□□ -0.97
SERF1A-204ENST00000504458 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
SERF1A-204ENST00000504458 KANK4Q5T7N3 995 aaPredicted RBP9□□□□□ -0.97
SERF1A-204ENST00000504458 FBXO41Q8TF61 875 aa9□□□□□ -0.97
SERF1A-204ENST00000504458 CUL7Q14999 1698 aa9□□□□□ -0.97
SERF1A-204ENST00000504458 TSPOAP1O95153 1857 aa9□□□□□ -0.97
SERF1A-204ENST00000504458 EFCAB5A4FU69 1503 aa9□□□□□ -0.97
SERF1A-204ENST00000504458 SHROOM2Q13796 1616 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms