RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CANXP27824 592 aaKnown RBP9.89□□□□□ -0.83
NEDD9-208ENST00000504387 PANK3Q9H999 370 aa9.89□□□□□ -0.83
NEDD9-208ENST00000504387 CFAP43Q8NDM7 1665 aa9.88□□□□□ -0.83
NEDD9-208ENST00000504387 EFCAB5A4FU69 1503 aa9.88□□□□□ -0.83
NEDD9-208ENST00000504387 SNAPC4Q5SXM2 1469 aa9.88□□□□□ -0.83
NEDD9-208ENST00000504387 ERCC6Q03468 1493 aa9.87□□□□□ -0.83
NEDD9-208ENST00000504387 RALBP1Q15311 655 aa9.87□□□□□ -0.83
NEDD9-208ENST00000504387 FAM43AQ8N2R8 423 aa9.87□□□□□ -0.83
NEDD9-208ENST00000504387 CUL7Q14999 1698 aa9.87□□□□□ -0.83
NEDD9-208ENST00000504387 PRG4Q92954 1404 aaPredicted RBP9.87□□□□□ -0.83
NEDD9-208ENST00000504387 WDR43Q15061 677 aaKnown RBP eCLIP9.86□□□□□ -0.83
NEDD9-208ENST00000504387 KTN1Q86UP2 1357 aaKnown RBP9.86□□□□□ -0.83
NEDD9-208ENST00000504387 BCL2L13Q9BXK5 485 aa9.86□□□□□ -0.83
NEDD9-208ENST00000504387 ZMYND15Q9H091 742 aa9.86□□□□□ -0.83
NEDD9-208ENST00000504387 RPRD2Q5VT52 1461 aaKnown RBP9.86□□□□□ -0.83
NEDD9-208ENST00000504387 IGHDP01880 384 aa9.86□□□□□ -0.83
NEDD9-208ENST00000504387 CENPQQ7L2Z9 268 aaPredicted RBP9.85□□□□□ -0.83
NEDD9-208ENST00000504387 COG6Q9Y2V7 657 aa9.85□□□□□ -0.83
NEDD9-208ENST00000504387 CLUAP1Q96AJ1 413 aa9.85□□□□□ -0.83
NEDD9-208ENST00000504387 PNNQ9H307 717 aaKnown RBP9.85□□□□□ -0.83
NEDD9-208ENST00000504387 EPRSP07814 1512 aaKnown RBP9.85□□□□□ -0.83
NEDD9-208ENST00000504387 MAGI3Q5TCQ9 1506 aa9.85□□□□□ -0.83
NEDD9-208ENST00000504387 PANK1Q8TE04 598 aa9.84□□□□□ -0.83
NEDD9-208ENST00000504387 ROCK2O75116 1388 aaKnown RBP9.84□□□□□ -0.83
NEDD9-208ENST00000504387 BCORL1Q5H9F3 1711 aa9.84□□□□□ -0.83
NEDD9-208ENST00000504387 SUPT6HQ7KZ85 1726 aaKnown RBP9.84□□□□□ -0.83
NEDD9-208ENST00000504387 PBRM1Q86U86 1689 aa9.84□□□□□ -0.83
NEDD9-208ENST00000504387 BRD4O60885 1362 aaPredicted RBP9.84□□□□□ -0.83
NEDD9-208ENST00000504387 TNNT2P45379 298 aaPredicted RBP9.84□□□□□ -0.83
NEDD9-208ENST00000504387 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
NEDD9-208ENST00000504387 GRIN2BQ13224 1484 aa9.84□□□□□ -0.83
NEDD9-208ENST00000504387 TEX14Q8IWB6 1497 aa9.84□□□□□ -0.83
NEDD9-208ENST00000504387 PDE3BQ13370 1112 aa9.83□□□□□ -0.84
NEDD9-208ENST00000504387 HSP90AA2PQ14568 343 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-208ENST00000504387 EHBP1L1Q8N3D4 1523 aa9.83□□□□□ -0.84
NEDD9-208ENST00000504387 ZNF608Q9ULD9 1512 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-208ENST00000504387 LRPPRCP42704 1394 aaKnown RBP9.82□□□□□ -0.84
NEDD9-208ENST00000504387 ZBTB7CA1YPR0 619 aa9.82□□□□□ -0.84
NEDD9-208ENST00000504387 FOXD4L1Q9NU39 408 aa9.82□□□□□ -0.84
NEDD9-208ENST00000504387 JPH4Q96JJ6 628 aa9.82□□□□□ -0.84
NEDD9-208ENST00000504387 DAPK1P53355 1430 aa9.82□□□□□ -0.84
NEDD9-208ENST00000504387 APAF1O14727 1248 aa9.82□□□□□ -0.84
NEDD9-208ENST00000504387 ABCC5O15440 1437 aa9.82□□□□□ -0.84
NEDD9-208ENST00000504387 RRP7AQ9Y3A4 280 aaKnown RBP9.81□□□□□ -0.84
NEDD9-208ENST00000504387 KDM2BQ8NHM5 1336 aa9.81□□□□□ -0.84
NEDD9-208ENST00000504387 CTTNBP2Q8WZ74 1663 aa9.81□□□□□ -0.84
NEDD9-208ENST00000504387 XRCC6P12956 609 aaKnown RBP eCLIP9.81□□□□□ -0.84
NEDD9-208ENST00000504387 HSP90AA1P07900 732 aaKnown RBP9.8□□□□□ -0.84
NEDD9-208ENST00000504387 CHGAP10645 457 aaKnown RBP9.8□□□□□ -0.84
NEDD9-208ENST00000504387 GOLGA2Q08379 1002 aa9.8□□□□□ -0.84
NEDD9-208ENST00000504387 TNNQ9UQP3 1299 aa9.8□□□□□ -0.84
NEDD9-208ENST00000504387 GOLGA6L3A6NEY3 463 aa9.8□□□□□ -0.84
NEDD9-208ENST00000504387 GLIPR1L2Q4G1C9 344 aa9.8□□□□□ -0.84
NEDD9-208ENST00000504387 DUSP27Q5VZP5 1158 aa9.8□□□□□ -0.84
NEDD9-208ENST00000504387 IFT140Q96RY7 1462 aa9.8□□□□□ -0.84
NEDD9-208ENST00000504387 DMRT2Q9Y5R5 561 aa9.8□□□□□ -0.84
NEDD9-208ENST00000504387 ANKRD30AQ9BXX3 1397 aa9.8□□□□□ -0.84
NEDD9-208ENST00000504387 BECN1Q14457 450 aa9.79□□□□□ -0.84
NEDD9-208ENST00000504387 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.79□□□□□ -0.84
NEDD9-208ENST00000504387 UGGT2Q9NYU1 1516 aa9.79□□□□□ -0.84
NEDD9-208ENST00000504387 MFAP1P55081 439 aaKnown RBP9.78□□□□□ -0.84
NEDD9-208ENST00000504387 PLEKHH1Q9ULM0 1364 aa9.78□□□□□ -0.84
NEDD9-208ENST00000504387 MIA2Q96PC5 1412 aa9.78□□□□□ -0.84
NEDD9-208ENST00000504387 PER1O15534 1290 aaPredicted RBP9.78□□□□□ -0.84
NEDD9-208ENST00000504387 KNSTRNQ9Y448 316 aa9.77□□□□□ -0.84
NEDD9-208ENST00000504387 EIF4G3O43432 1585 aaKnown RBP9.77□□□□□ -0.85
NEDD9-208ENST00000504387 ADAMTS12P58397 1594 aa9.77□□□□□ -0.85
NEDD9-208ENST00000504387 PLB1Q6P1J6 1458 aa9.77□□□□□ -0.85
NEDD9-208ENST00000504387 ANKRD50Q9ULJ7 1429 aa9.76□□□□□ -0.85
NEDD9-208ENST00000504387 USP19O94966 1318 aa9.76□□□□□ -0.85
NEDD9-208ENST00000504387 L1TD1Q5T7N2 865 aaKnown RBP9.76□□□□□ -0.85
NEDD9-208ENST00000504387 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
NEDD9-208ENST00000504387 UPF2Q9HAU5 1272 aaKnown RBP9.76□□□□□ -0.85
NEDD9-208ENST00000504387 RBM10P98175 930 aaKnown RBP9.75□□□□□ -0.85
NEDD9-208ENST00000504387 DISP3Q9P2K9 1392 aa9.74□□□□□ -0.85
NEDD9-208ENST00000504387 HECW1Q76N89 1606 aa9.74□□□□□ -0.85
NEDD9-208ENST00000504387 LRRIQ1Q96JM4 1722 aa9.74□□□□□ -0.85
NEDD9-208ENST00000504387 PPP2R1AP30153 589 aa9.74□□□□□ -0.85
NEDD9-208ENST00000504387 TRAK2O60296 914 aa9.73□□□□□ -0.85
NEDD9-208ENST00000504387 TRIM44Q96DX7 344 aaPredicted RBP9.73□□□□□ -0.85
NEDD9-208ENST00000504387 IQGAP2Q13576 1575 aa9.73□□□□□ -0.85
NEDD9-208ENST00000504387 KIAA1107Q9UPP5 1409 aa9.73□□□□□ -0.85
NEDD9-208ENST00000504387 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
NEDD9-208ENST00000504387 SAMD9Q5K651 1589 aa9.72□□□□□ -0.85
NEDD9-208ENST00000504387 PZPP20742 1482 aa9.72□□□□□ -0.85
NEDD9-208ENST00000504387 PARD3Q8TEW0 1356 aa9.72□□□□□ -0.85
NEDD9-208ENST00000504387 MCM4P33991 863 aa9.72□□□□□ -0.85
NEDD9-208ENST00000504387 TMF1P82094 1093 aa9.71□□□□□ -0.85
NEDD9-208ENST00000504387 SLFN5Q08AF3 891 aa9.71□□□□□ -0.85
NEDD9-208ENST00000504387 ERBB4Q15303 1308 aa9.71□□□□□ -0.85
NEDD9-208ENST00000504387 PDZRN3Q9UPQ7 1066 aa9.71□□□□□ -0.86
NEDD9-208ENST00000504387 PCDHB15Q9Y5E8 787 aa9.71□□□□□ -0.86
NEDD9-208ENST00000504387 CAMSAP2Q08AD1 1489 aa9.7□□□□□ -0.86
NEDD9-208ENST00000504387 RLBP1P12271 317 aa9.7□□□□□ -0.86
NEDD9-208ENST00000504387 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
NEDD9-208ENST00000504387 NCLP19338 710 aaKnown RBP9.69□□□□□ -0.86
NEDD9-208ENST00000504387 NUP153P49790 1475 aaKnown RBP9.69□□□□□ -0.86
NEDD9-208ENST00000504387 A0A0U1RQG5 324 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-208ENST00000504387 NUTM2DQ5VT03 806 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-208ENST00000504387 ANTXR1Q9H6X2 564 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms