RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 NOC3LQ8WTT2 800 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-205ENST00000504178 TRAK1Q9UPV9 953 aa8.97□□□□□ -0.97
SYNPO2-205ENST00000504178 NOL8Q76FK4 1167 aaKnown RBP8.96□□□□□ -0.98
SYNPO2-205ENST00000504178 TCERG1O14776 1098 aaKnown RBP8.96□□□□□ -0.98
SYNPO2-205ENST00000504178 FRAT2O75474 233 aaPredicted RBP8.96□□□□□ -0.98
SYNPO2-205ENST00000504178 RASSF8Q8NHQ8 419 aa8.96□□□□□ -0.98
SYNPO2-205ENST00000504178 KIF15Q9NS87 1388 aa8.96□□□□□ -0.98
SYNPO2-205ENST00000504178 GTF2E1P29083 439 aaPredicted RBP8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 CSPP1Q1MSJ5 1256 aa8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 SLKQ9H2G2 1235 aaPredicted RBP8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 GZF1Q9H116 711 aaPredicted RBP8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 TOMM22Q9NS69 142 aa8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 CCDC144AA2RUR9 1427 aa8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 C1orf141Q5JVX7 400 aa8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 L3MBTL2Q969R5 705 aa8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 PHLDB1Q86UU1 1377 aa8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 CADPSQ9ULU8 1353 aa8.95□□□□□ -0.98
SYNPO2-205ENST00000504178 EVA1CP58658 441 aa8.94□□□□□ -0.98
SYNPO2-205ENST00000504178 CLUAP1Q96AJ1 413 aa8.94□□□□□ -0.98
SYNPO2-205ENST00000504178 VPS53Q5VIR6 699 aa8.94□□□□□ -0.98
SYNPO2-205ENST00000504178 CCDC34Q96HJ3 373 aa8.94□□□□□ -0.98
SYNPO2-205ENST00000504178 FOXD4L1Q9NU39 408 aa8.94□□□□□ -0.98
SYNPO2-205ENST00000504178 DEKP35659 375 aaKnown RBP8.93□□□□□ -0.98
SYNPO2-205ENST00000504178 COG3Q96JB2 828 aa8.93□□□□□ -0.98
SYNPO2-205ENST00000504178 RBM19Q9Y4C8 960 aaKnown RBP8.93□□□□□ -0.98
SYNPO2-205ENST00000504178 RRP7AQ9Y3A4 280 aaKnown RBP8.93□□□□□ -0.98
SYNPO2-205ENST00000504178 JPH4Q96JJ6 628 aa8.93□□□□□ -0.98
SYNPO2-205ENST00000504178 CREBRFQ8IUR6 639 aa8.92□□□□□ -0.98
SYNPO2-205ENST00000504178 AMER1Q5JTC6 1135 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-205ENST00000504178 NLRP13Q86W25 1043 aa8.92□□□□□ -0.98
SYNPO2-205ENST00000504178 PRM3Q9NNZ6 103 aa8.92□□□□□ -0.98
SYNPO2-205ENST00000504178 MYBBP1AQ9BQG0 1328 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-205ENST00000504178 MARCH6O60337 910 aa8.92□□□□□ -0.98
SYNPO2-205ENST00000504178 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.92□□□□□ -0.98
SYNPO2-205ENST00000504178 KIF16BQ96L93 1317 aa8.92□□□□□ -0.98
SYNPO2-205ENST00000504178 EVC2Q86UK5 1308 aa8.91□□□□□ -0.98
SYNPO2-205ENST00000504178 MEX3CQ5U5Q3 659 aaKnown RBP8.91□□□□□ -0.98
SYNPO2-205ENST00000504178 MSH5O43196 834 aa8.91□□□□□ -0.98
SYNPO2-205ENST00000504178 PANK3Q9H999 370 aa8.91□□□□□ -0.98
SYNPO2-205ENST00000504178 PDE4CQ08493 712 aa8.91□□□□□ -0.98
SYNPO2-205ENST00000504178 CGNL1Q0VF96 1302 aa8.9□□□□□ -0.98
SYNPO2-205ENST00000504178 FANCD2Q9BXW9 1451 aa8.9□□□□□ -0.98
SYNPO2-205ENST00000504178 PDE3BQ13370 1112 aa8.9□□□□□ -0.98
SYNPO2-205ENST00000504178 ST18O60284 1047 aa8.9□□□□□ -0.98
SYNPO2-205ENST00000504178 PRDM2Q13029 1718 aa8.9□□□□□ -0.98
SYNPO2-205ENST00000504178 SMARCA4P51532 1647 aa8.9□□□□□ -0.99
SYNPO2-205ENST00000504178 RILPL2Q969X0 211 aa8.89□□□□□ -0.99
SYNPO2-205ENST00000504178 TTC5Q8N0Z6 440 aa8.89□□□□□ -0.99
SYNPO2-205ENST00000504178 GOLGA6L3A6NEY3 463 aa8.89□□□□□ -0.99
SYNPO2-205ENST00000504178 VGFO15240 615 aaPredicted RBP8.89□□□□□ -0.99
SYNPO2-205ENST00000504178 FOXD4L5Q5VV16 416 aaPredicted RBP8.89□□□□□ -0.99
SYNPO2-205ENST00000504178 FOXD4L4Q8WXT5 416 aaPredicted RBP8.89□□□□□ -0.99
SYNPO2-205ENST00000504178 PTPRGP23470 1445 aa8.89□□□□□ -0.99
SYNPO2-205ENST00000504178 MINK1Q8N4C8 1332 aaPredicted RBP8.88□□□□□ -0.99
SYNPO2-205ENST00000504178 H3BQV1 296 aa8.88□□□□□ -0.99
SYNPO2-205ENST00000504178 IFFO2Q5TF58 517 aa8.88□□□□□ -0.99
SYNPO2-205ENST00000504178 A0A0U1RQG5 324 aaPredicted RBP8.88□□□□□ -0.99
SYNPO2-205ENST00000504178 KIF3AQ9Y496 699 aa8.88□□□□□ -0.99
SYNPO2-205ENST00000504178 NGEFQ8N5V2 710 aa8.88□□□□□ -0.99
SYNPO2-205ENST00000504178 TRIM34Q9BYJ4 488 aa8.88□□□□□ -0.99
SYNPO2-205ENST00000504178 NOL10Q9BSC4 688 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-205ENST00000504178 PHF14O94880 888 aa8.87□□□□□ -0.99
SYNPO2-205ENST00000504178 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-205ENST00000504178 ST20-MTHFSA0A0A6YYL1 179 aa8.87□□□□□ -0.99
SYNPO2-205ENST00000504178 ELL2O00472 640 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-205ENST00000504178 AMOTL1Q8IY63 956 aa8.87□□□□□ -0.99
SYNPO2-205ENST00000504178 TEFQ10587 303 aa8.87□□□□□ -0.99
SYNPO2-205ENST00000504178 ANKRD45Q5TZF3 282 aa8.87□□□□□ -0.99
SYNPO2-205ENST00000504178 EIF2S2P20042 333 aaKnown RBP8.86□□□□□ -0.99
SYNPO2-205ENST00000504178 AKAP17AQ02040 695 aaKnown RBP8.86□□□□□ -0.99
SYNPO2-205ENST00000504178 TPD52L1Q16890 204 aaPredicted RBP8.86□□□□□ -0.99
SYNPO2-205ENST00000504178 ATAD2BQ9ULI0 1458 aa8.86□□□□□ -0.99
SYNPO2-205ENST00000504178 FAM184AQ8NB25 1140 aa8.86□□□□□ -0.99
SYNPO2-205ENST00000504178 CYB5RLQ6IPT4 315 aa8.86□□□□□ -0.99
SYNPO2-205ENST00000504178 CEP89Q96ST8 783 aa8.86□□□□□ -0.99
SYNPO2-205ENST00000504178 ARID3AQ99856 593 aa8.86□□□□□ -0.99
SYNPO2-205ENST00000504178 NEXNQ0ZGT2 675 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 FBXW7Q969H0 707 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 E9PSI1 815 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 CTDP1Q9Y5B0 961 aaPredicted RBP8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 RAD21O60216 631 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 PSME1Q06323 249 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 ZKSCAN2Q63HK3 967 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 BCL2L13Q9BXK5 485 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 TPM3P06753 285 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 GOLGA6L1Q8N7Z2 621 aa8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 IPO9Q96P70 1041 aaKnown RBP8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 PES1O00541 588 aaKnown RBP8.85□□□□□ -0.99
SYNPO2-205ENST00000504178 USP47Q96K76 1375 aa8.84□□□□□ -0.99
SYNPO2-205ENST00000504178 SYTL4Q96C24 671 aaPredicted RBP8.84□□□□□ -0.99
SYNPO2-205ENST00000504178 TCEAL9Q9UHQ7 104 aa8.84□□□□□ -0.99
SYNPO2-205ENST00000504178 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
SYNPO2-205ENST00000504178 C9orf78Q9NZ63 289 aaPredicted RBP8.84□□□□□ -0.99
SYNPO2-205ENST00000504178 TPM2P07951 284 aa8.84□□□□□ -0.99
SYNPO2-205ENST00000504178 LRRFIP1Q32MZ4 808 aaKnown RBP8.84□□□□□ -0.99
SYNPO2-205ENST00000504178 CENPQQ7L2Z9 268 aaPredicted RBP8.84□□□□□ -0.99
SYNPO2-205ENST00000504178 DIAPH3Q9NSV4 1193 aa8.84□□□□□ -0.99
SYNPO2-205ENST00000504178 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.84□□□□□ -1
SYNPO2-205ENST00000504178 CHMP4CQ96CF2 233 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms