RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 KIAA1107Q9UPP5 1409 aa23.47■■□□□ 1.35
POLR2J3-209ENST00000504157 CDK13Q14004 1512 aaKnown RBP23.47■■□□□ 1.35
POLR2J3-209ENST00000504157 ZMYND15Q9H091 742 aa23.46■■□□□ 1.35
POLR2J3-209ENST00000504157 IQGAP2Q13576 1575 aa23.44■■□□□ 1.34
POLR2J3-209ENST00000504157 E9PCH4 1651 aa23.44■■□□□ 1.34
POLR2J3-209ENST00000504157 INSRP06213 1382 aa23.44■■□□□ 1.34
POLR2J3-209ENST00000504157 OSCARQ8IYS5 282 aa23.43■■□□□ 1.34
POLR2J3-209ENST00000504157 DAXXQ9UER7 740 aaPredicted RBP23.42■■□□□ 1.34
POLR2J3-209ENST00000504157 ZMYM4Q5VZL5 1548 aa23.42■■□□□ 1.34
POLR2J3-209ENST00000504157 ARHGEF12Q9NZN5 1544 aa23.41■■□□□ 1.34
POLR2J3-209ENST00000504157 VSIG10Q8N0Z9 540 aa23.39■■□□□ 1.34
POLR2J3-209ENST00000504157 JPH4Q96JJ6 628 aa23.39■■□□□ 1.34
POLR2J3-209ENST00000504157 FRAT2O75474 233 aaPredicted RBP23.39■■□□□ 1.33
POLR2J3-209ENST00000504157 SLC4A3P48751 1232 aa23.39■■□□□ 1.33
POLR2J3-209ENST00000504157 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
POLR2J3-209ENST00000504157 ADGRL2O95490 1459 aa23.37■■□□□ 1.33
POLR2J3-209ENST00000504157 RRAGDQ9NQL2 400 aaPredicted RBP23.36■■□□□ 1.33
POLR2J3-209ENST00000504157 POLR3GLQ9BT43 218 aa23.34■■□□□ 1.33
POLR2J3-209ENST00000504157 PARD3Q8TEW0 1356 aa23.33■■□□□ 1.33
POLR2J3-209ENST00000504157 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.33
POLR2J3-209ENST00000504157 NLRP13Q86W25 1043 aa23.33■■□□□ 1.33
POLR2J3-209ENST00000504157 RRP9O43818 475 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-209ENST00000504157 CNGB1Q14028 1251 aaPredicted RBP23.3■■□□□ 1.32
POLR2J3-209ENST00000504157 PLEKHH2Q8IVE3 1493 aa23.3■■□□□ 1.32
POLR2J3-209ENST00000504157 BLMP54132 1417 aaPredicted RBP23.28■■□□□ 1.32
POLR2J3-209ENST00000504157 CARD11Q9BXL7 1154 aa23.27■■□□□ 1.32
POLR2J3-209ENST00000504157 CROCC2H7BZ55 1655 aa23.27■■□□□ 1.32
POLR2J3-209ENST00000504157 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.31
POLR2J3-209ENST00000504157 HSP90AA2PQ14568 343 aaPredicted RBP23.27■■□□□ 1.31
POLR2J3-209ENST00000504157 PRG4Q92954 1404 aaPredicted RBP23.26■■□□□ 1.31
POLR2J3-209ENST00000504157 DISP1Q96F81 1524 aa23.26■■□□□ 1.31
POLR2J3-209ENST00000504157 ZNF644Q9H582 1327 aaPredicted RBP23.26■■□□□ 1.31
POLR2J3-209ENST00000504157 CAMSAP2Q08AD1 1489 aa23.26■■□□□ 1.31
POLR2J3-209ENST00000504157 L1TD1Q5T7N2 865 aaKnown RBP23.25■■□□□ 1.31
POLR2J3-209ENST00000504157 PKD2Q13563 968 aa23.24■■□□□ 1.31
POLR2J3-209ENST00000504157 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-209ENST00000504157 KDM2BQ8NHM5 1336 aa23.24■■□□□ 1.31
POLR2J3-209ENST00000504157 ITSN2Q9NZM3 1697 aa23.24■■□□□ 1.31
POLR2J3-209ENST00000504157 SHROOM2Q13796 1616 aa23.23■■□□□ 1.31
POLR2J3-209ENST00000504157 SKAP1Q86WV1 359 aa23.23■■□□□ 1.31
POLR2J3-209ENST00000504157 FAM161AQ3B820 660 aa23.23■■□□□ 1.31
POLR2J3-209ENST00000504157 KDM5DQ9BY66 1539 aa23.22■■□□□ 1.31
POLR2J3-209ENST00000504157 NUP153P49790 1475 aaKnown RBP23.21■■□□□ 1.31
POLR2J3-209ENST00000504157 CARMIL2Q6F5E8 1435 aa23.21■■□□□ 1.31
POLR2J3-209ENST00000504157 KIAA0556O60303 1618 aa23.21■■□□□ 1.31
POLR2J3-209ENST00000504157 ST20-MTHFSA0A0A6YYL1 179 aa23.2■■□□□ 1.3
POLR2J3-209ENST00000504157 HSP90AA1P07900 732 aaKnown RBP23.2■■□□□ 1.3
POLR2J3-209ENST00000504157 CRBNQ96SW2 442 aa23.2■■□□□ 1.3
POLR2J3-209ENST00000504157 C8orf34Q49A92 452 aa23.2■■□□□ 1.3
POLR2J3-209ENST00000504157 ANKRD30AQ9BXX3 1397 aa23.19■■□□□ 1.3
POLR2J3-209ENST00000504157 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
POLR2J3-209ENST00000504157 CENPQQ7L2Z9 268 aaPredicted RBP23.18■■□□□ 1.3
POLR2J3-209ENST00000504157 POGKQ9P215 609 aa23.18■■□□□ 1.3
POLR2J3-209ENST00000504157 CLCN1P35523 988 aa23.17■■□□□ 1.3
POLR2J3-209ENST00000504157 CDCA7LQ96GN5 454 aa23.17■■□□□ 1.3
POLR2J3-209ENST00000504157 PNNQ9H307 717 aaKnown RBP23.17■■□□□ 1.3
POLR2J3-209ENST00000504157 NAP1L5Q96NT1 182 aaPredicted RBP23.17■■□□□ 1.3
POLR2J3-209ENST00000504157 RAPGEF6Q8TEU7 1601 aa23.16■■□□□ 1.3
POLR2J3-209ENST00000504157 TROQ12816 1431 aaPredicted RBP23.15■■□□□ 1.3
POLR2J3-209ENST00000504157 ANKRD50Q9ULJ7 1429 aa23.15■■□□□ 1.3
POLR2J3-209ENST00000504157 ADCY10Q96PN6 1610 aa23.14■■□□□ 1.3
POLR2J3-209ENST00000504157 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.29
POLR2J3-209ENST00000504157 GPATCH8Q9UKJ3 1502 aaKnown RBP23.13■■□□□ 1.29
POLR2J3-209ENST00000504157 SHANK2Q9UPX8 1470 aa23.13■■□□□ 1.29
POLR2J3-209ENST00000504157 PLIN1O60240 522 aa23.12■■□□□ 1.29
POLR2J3-209ENST00000504157 PODXL2Q9NZ53 605 aa23.11■■□□□ 1.29
POLR2J3-209ENST00000504157 PTPRGP23470 1445 aa23.1■■□□□ 1.29
POLR2J3-209ENST00000504157 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
POLR2J3-209ENST00000504157 LAMC1P11047 1609 aa23.09■■□□□ 1.29
POLR2J3-209ENST00000504157 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.29
POLR2J3-209ENST00000504157 COL17A1Q9UMD9 1497 aaPredicted RBP23.08■■□□□ 1.29
POLR2J3-209ENST00000504157 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
POLR2J3-209ENST00000504157 ARID3CA6NKF2 412 aa23.06■■□□□ 1.28
POLR2J3-209ENST00000504157 NUP155O75694 1391 aa23.06■■□□□ 1.28
POLR2J3-209ENST00000504157 PRAG1Q86YV5 1406 aa23.04■■□□□ 1.28
POLR2J3-209ENST00000504157 FSD2A1L4K1 749 aa23.02■■□□□ 1.28
POLR2J3-209ENST00000504157 XRCC6P12956 609 aaKnown RBP eCLIP23.02■■□□□ 1.28
POLR2J3-209ENST00000504157 C20orf194Q5TEA3 1177 aa23.02■■□□□ 1.28
POLR2J3-209ENST00000504157 PLB1Q6P1J6 1458 aa23■■□□□ 1.27
POLR2J3-209ENST00000504157 PRDM15P57071 1507 aaPredicted RBP22.99■■□□□ 1.27
POLR2J3-209ENST00000504157 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.98■■□□□ 1.27
POLR2J3-209ENST00000504157 C9orf84Q5VXU9 1444 aa22.98■■□□□ 1.27
POLR2J3-209ENST00000504157 CDC42BPAQ5VT25 1732 aa22.97■■□□□ 1.27
POLR2J3-209ENST00000504157 GOLGA6L3A6NEY3 463 aa22.97■■□□□ 1.27
POLR2J3-209ENST00000504157 EIF3AQ14152 1382 aaKnown RBP22.97■■□□□ 1.27
POLR2J3-209ENST00000504157 KDM2AQ9Y2K7 1162 aa22.97■■□□□ 1.27
POLR2J3-209ENST00000504157 CENPJQ9HC77 1338 aaPredicted RBP22.97■■□□□ 1.27
POLR2J3-209ENST00000504157 DUSP27Q5VZP5 1158 aa22.96■■□□□ 1.27
POLR2J3-209ENST00000504157 USP19O94966 1318 aa22.96■■□□□ 1.27
POLR2J3-209ENST00000504157 ZNF521Q96K83 1311 aa22.96■■□□□ 1.27
POLR2J3-209ENST00000504157 VIRMAQ69YN4 1812 aaKnown RBP22.96■■□□□ 1.27
POLR2J3-209ENST00000504157 PLEKHG5O94827 1062 aa22.95■■□□□ 1.26
POLR2J3-209ENST00000504157 BECN1Q14457 450 aa22.95■■□□□ 1.26
POLR2J3-209ENST00000504157 ANTXR1Q9H6X2 564 aa22.93■■□□□ 1.26
POLR2J3-209ENST00000504157 TESK2Q96S53 571 aa22.92■■□□□ 1.26
POLR2J3-209ENST00000504157 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
POLR2J3-209ENST00000504157 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
POLR2J3-209ENST00000504157 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
POLR2J3-209ENST00000504157 ABCC10Q5T3U5 1492 aa22.91■■□□□ 1.26
POLR2J3-209ENST00000504157 DISP3Q9P2K9 1392 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms