RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 PCDH10Q9P2E7 1040 aa7.46□□□□□ -1.22
ATXN3-208ENST00000504047 KCNK17Q96T54 332 aa7.45□□□□□ -1.22
ATXN3-208ENST00000504047 C6orf132Q5T0Z8 1188 aa7.44□□□□□ -1.22
ATXN3-208ENST00000504047 CERKQ8TCT0 537 aa7.43□□□□□ -1.22
ATXN3-208ENST00000504047 AXIN2Q9Y2T1 843 aa7.43□□□□□ -1.22
ATXN3-208ENST00000504047 NUTM2FA1L443 756 aa7.42□□□□□ -1.22
ATXN3-208ENST00000504047 PPP1R3GB7ZBB8 358 aa7.42□□□□□ -1.22
ATXN3-208ENST00000504047 PSEN2P49810 448 aa7.41□□□□□ -1.22
ATXN3-208ENST00000504047 TSR1Q2NL82 804 aaKnown RBP7.41□□□□□ -1.22
ATXN3-208ENST00000504047 RBM26Q5T8P6 1007 aaKnown RBP7.41□□□□□ -1.22
ATXN3-208ENST00000504047 PRIM1P49642 420 aaKnown RBP7.39□□□□□ -1.23
ATXN3-208ENST00000504047 LSM11P83369 360 aaKnown RBP eCLIP7.39□□□□□ -1.23
ATXN3-208ENST00000504047 LMOD2Q6P5Q4 547 aa7.39□□□□□ -1.23
ATXN3-208ENST00000504047 POTEEQ6S8J3 1075 aa7.39□□□□□ -1.23
ATXN3-208ENST00000504047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.39□□□□□ -1.23
ATXN3-208ENST00000504047 GPIHBP1Q8IV16 184 aa7.39□□□□□ -1.23
ATXN3-208ENST00000504047 ANKRD13DQ6ZTN6 518 aa7.38□□□□□ -1.23
ATXN3-208ENST00000504047 TK2O00142 265 aa7.37□□□□□ -1.23
ATXN3-208ENST00000504047 FCHSD2O94868 740 aa7.37□□□□□ -1.23
ATXN3-208ENST00000504047 COL9A1P20849 921 aa7.37□□□□□ -1.23
ATXN3-208ENST00000504047 DMRTA1Q5VZB9 504 aa7.37□□□□□ -1.23
ATXN3-208ENST00000504047 SLC4A5Q9BY07 1137 aa7.37□□□□□ -1.23
ATXN3-208ENST00000504047 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
ATXN3-208ENST00000504047 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
ATXN3-208ENST00000504047 CDHR5Q9HBB8 845 aa7.37□□□□□ -1.23
ATXN3-208ENST00000504047 PTGDRQ13258 359 aa7.36□□□□□ -1.23
ATXN3-208ENST00000504047 STAC3Q96MF2 364 aa7.36□□□□□ -1.23
ATXN3-208ENST00000504047 ZBED2Q9BTP6 218 aa7.36□□□□□ -1.23
ATXN3-208ENST00000504047 HIC1Q14526 733 aa7.35□□□□□ -1.23
ATXN3-208ENST00000504047 ADGRD1Q6QNK2 874 aa7.35□□□□□ -1.23
ATXN3-208ENST00000504047 RBM27Q9P2N5 1060 aaKnown RBP7.35□□□□□ -1.23
ATXN3-208ENST00000504047 ONECUT3O60422 494 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-208ENST00000504047 PRSS12P56730 875 aa7.34□□□□□ -1.23
ATXN3-208ENST00000504047 CDCA7LQ96GN5 454 aa7.34□□□□□ -1.23
ATXN3-208ENST00000504047 VPS9D1Q9Y2B5 631 aa7.34□□□□□ -1.23
ATXN3-208ENST00000504047 TRIM6-TRIM34B2RNG4 842 aa7.33□□□□□ -1.24
ATXN3-208ENST00000504047 PACS2Q86VP3 889 aa7.33□□□□□ -1.24
ATXN3-208ENST00000504047 NBPF3Q9H094 633 aa7.33□□□□□ -1.24
ATXN3-208ENST00000504047 NPDC1Q9NQX5 325 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-208ENST00000504047 PLSCR2Q9NRY7 297 aa7.33□□□□□ -1.24
ATXN3-208ENST00000504047 GNPATO15228 680 aa7.32□□□□□ -1.24
ATXN3-208ENST00000504047 PROX2Q3B8N5 592 aa7.32□□□□□ -1.24
ATXN3-208ENST00000504047 RABGEF1Q9UJ41 708 aa7.32□□□□□ -1.24
ATXN3-208ENST00000504047 NBPF26B4DH59 902 aa7.3□□□□□ -1.24
ATXN3-208ENST00000504047 PADI6Q6TGC4 694 aa7.3□□□□□ -1.24
ATXN3-208ENST00000504047 KIAA1468Q9P260 1216 aa7.3□□□□□ -1.24
ATXN3-208ENST00000504047 TSKSQ9UJT2 592 aa7.3□□□□□ -1.24
ATXN3-208ENST00000504047 MRPL50Q8N5N7 158 aaKnown RBP7.29□□□□□ -1.24
ATXN3-208ENST00000504047 GOLGA8CPA6NN73 597 aa7.28□□□□□ -1.24
ATXN3-208ENST00000504047 GPR37O15354 613 aa7.28□□□□□ -1.24
ATXN3-208ENST00000504047 HRO43593 1189 aa7.28□□□□□ -1.24
ATXN3-208ENST00000504047 ZC3H15Q8WU90 426 aaKnown RBP7.28□□□□□ -1.24
ATXN3-208ENST00000504047 BHMG1C9JSJ3 638 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-208ENST00000504047 LAPTM4BQ86VI4 370 aa7.27□□□□□ -1.25
ATXN3-208ENST00000504047 TTC13Q8NBP0 860 aa7.27□□□□□ -1.25
ATXN3-208ENST00000504047 PNMA3Q9UL41 463 aa7.27□□□□□ -1.25
ATXN3-208ENST00000504047 NUDT18Q6ZVK8 323 aa7.26□□□□□ -1.25
ATXN3-208ENST00000504047 KRI1Q8N9T8 703 aaKnown RBP7.26□□□□□ -1.25
ATXN3-208ENST00000504047 RBM46Q8TBY0 533 aaKnown RBP7.26□□□□□ -1.25
ATXN3-208ENST00000504047 TATDN2Q93075 761 aa7.26□□□□□ -1.25
ATXN3-208ENST00000504047 OATP04181 439 aa7.25□□□□□ -1.25
ATXN3-208ENST00000504047 MAP2K5Q13163 448 aa7.25□□□□□ -1.25
ATXN3-208ENST00000504047 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
ATXN3-208ENST00000504047 SPNS2Q8IVW8 549 aa7.25□□□□□ -1.25
ATXN3-208ENST00000504047 ZMYND10O75800 440 aa7.24□□□□□ -1.25
ATXN3-208ENST00000504047 FECHP22830 423 aa7.24□□□□□ -1.25
ATXN3-208ENST00000504047 HDGFP51858 240 aaKnown RBP7.24□□□□□ -1.25
ATXN3-208ENST00000504047 FAM198AQ9UFP1 575 aa7.24□□□□□ -1.25
ATXN3-208ENST00000504047 SEPT9Q9UHD8 586 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-208ENST00000504047 MYT1LQ9UL68 1186 aa7.24□□□□□ -1.25
ATXN3-208ENST00000504047 MINK1Q8N4C8 1332 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-208ENST00000504047 BARGINQ6ZT62 677 aa7.23□□□□□ -1.25
ATXN3-208ENST00000504047 ADGRG1Q9Y653 693 aa7.23□□□□□ -1.25
ATXN3-208ENST00000504047 SMAPO00193 183 aa7.22□□□□□ -1.25
ATXN3-208ENST00000504047 IRF6O14896 467 aa7.21□□□□□ -1.26
ATXN3-208ENST00000504047 SLC4A3P48751 1232 aa7.21□□□□□ -1.26
ATXN3-208ENST00000504047 ANKK1Q8NFD2 765 aa7.21□□□□□ -1.26
ATXN3-208ENST00000504047 ZFRQ96KR1 1074 aaKnown RBP7.21□□□□□ -1.26
ATXN3-208ENST00000504047 DNAJB2P25686 324 aa7.2□□□□□ -1.26
ATXN3-208ENST00000504047 FAM161AQ3B820 660 aa7.2□□□□□ -1.26
ATXN3-208ENST00000504047 PXYLP1Q8TE99 480 aa7.2□□□□□ -1.26
ATXN3-208ENST00000504047 WNT2BQ93097 391 aa7.2□□□□□ -1.26
ATXN3-208ENST00000504047 RNF166Q96A37 237 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-208ENST00000504047 EYA1Q99502 592 aa7.2□□□□□ -1.26
ATXN3-208ENST00000504047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.19□□□□□ -1.26
ATXN3-208ENST00000504047 METTL3Q86U44 580 aaKnown RBP7.19□□□□□ -1.26
ATXN3-208ENST00000504047 C3orf80F5H4A9 247 aa7.18□□□□□ -1.26
ATXN3-208ENST00000504047 CCDC102AQ96A19 550 aa7.18□□□□□ -1.26
ATXN3-208ENST00000504047 KCTD12Q96CX2 325 aaKnown RBP7.18□□□□□ -1.26
ATXN3-208ENST00000504047 LRCH3Q96II8 777 aa7.18□□□□□ -1.26
ATXN3-208ENST00000504047 RCCD1A6NED2 376 aa7.17□□□□□ -1.26
ATXN3-208ENST00000504047 MMRN1Q13201 1228 aa7.17□□□□□ -1.26
ATXN3-208ENST00000504047 TPRNQ4KMQ1 711 aa7.17□□□□□ -1.26
ATXN3-208ENST00000504047 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-208ENST00000504047 SAMD7Q7Z3H4 446 aa7.16□□□□□ -1.26
ATXN3-208ENST00000504047 SLF2Q8IX21 1173 aa7.16□□□□□ -1.26
ATXN3-208ENST00000504047 NECTIN2Q92692 538 aa7.16□□□□□ -1.26
ATXN3-208ENST00000504047 AK7Q96M32 723 aa7.16□□□□□ -1.26
ATXN3-208ENST00000504047 SOWAHBA6NEL2 793 aa7.15□□□□□ -1.26
ATXN3-208ENST00000504047 RNF40O75150 1001 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms