RNA–Protein interactions for RNA: ENST00000503668.1

HULC-201, hepatocellular carcinoma up-regulated long non-coding RNA, humanhuman

TSL 1 (best) BASIC

Gene HULC, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HULC-201ENST00000503668 MYT1LQ9UL68 1186 aa13.57□□□□□ -0.24
HULC-201ENST00000503668 CUX1P39880 1505 aa13.56□□□□□ -0.24
HULC-201ENST00000503668 TIMELESSQ9UNS1 1208 aa13.56□□□□□ -0.24
HULC-201ENST00000503668 CCNB3Q8WWL7 1395 aa13.55□□□□□ -0.24
HULC-201ENST00000503668 KDM4FA0A1W2PPD8 638 aa13.52□□□□□ -0.25
HULC-201ENST00000503668 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
HULC-201ENST00000503668 LSM11P83369 360 aaKnown RBP eCLIP13.51□□□□□ -0.25
HULC-201ENST00000503668 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
HULC-201ENST00000503668 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
HULC-201ENST00000503668 ARHGAP35Q9NRY4 1499 aa13.49□□□□□ -0.25
HULC-201ENST00000503668 FHAD1B1AJZ9 1412 aa13.48□□□□□ -0.25
HULC-201ENST00000503668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.48□□□□□ -0.25
HULC-201ENST00000503668 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
HULC-201ENST00000503668 FOXK1P85037 733 aa13.47□□□□□ -0.25
HULC-201ENST00000503668 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
HULC-201ENST00000503668 PTCD2Q8WV60 388 aaKnown RBP13.47□□□□□ -0.25
HULC-201ENST00000503668 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
HULC-201ENST00000503668 DSG2Q14126 1118 aa13.45□□□□□ -0.26
HULC-201ENST00000503668 PBX2P40425 430 aa13.43□□□□□ -0.26
HULC-201ENST00000503668 PTGER2P43116 358 aa13.43□□□□□ -0.26
HULC-201ENST00000503668 KANK4Q5T7N3 995 aaPredicted RBP13.43□□□□□ -0.26
HULC-201ENST00000503668 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
HULC-201ENST00000503668 IGF1RP08069 1367 aa13.43□□□□□ -0.26
HULC-201ENST00000503668 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
HULC-201ENST00000503668 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
HULC-201ENST00000503668 AQRO60306 1485 aaKnown RBP eCLIP13.41□□□□□ -0.26
HULC-201ENST00000503668 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
HULC-201ENST00000503668 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
HULC-201ENST00000503668 CARMIL1Q5VZK9 1371 aa13.39□□□□□ -0.27
HULC-201ENST00000503668 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
HULC-201ENST00000503668 CFAP43Q8NDM7 1665 aa13.38□□□□□ -0.27
HULC-201ENST00000503668 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
HULC-201ENST00000503668 ARHGAP33O14559 1287 aa13.36□□□□□ -0.27
HULC-201ENST00000503668 FYCO1Q9BQS8 1478 aa13.34□□□□□ -0.27
HULC-201ENST00000503668 CC2D2AQ9P2K1 1620 aa13.33□□□□□ -0.28
HULC-201ENST00000503668 PSEN2P49810 448 aa13.33□□□□□ -0.28
HULC-201ENST00000503668 MAPKBP1O60336 1514 aa13.33□□□□□ -0.28
HULC-201ENST00000503668 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
HULC-201ENST00000503668 PSDA5PKW4 1024 aaPredicted RBP13.32□□□□□ -0.28
HULC-201ENST00000503668 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
HULC-201ENST00000503668 CUL7Q14999 1698 aa13.31□□□□□ -0.28
HULC-201ENST00000503668 ADGRD1Q6QNK2 874 aa13.31□□□□□ -0.28
HULC-201ENST00000503668 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
HULC-201ENST00000503668 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
HULC-201ENST00000503668 CRISPLD2Q9H0B8 497 aa13.3□□□□□ -0.28
HULC-201ENST00000503668 SUPT16HQ9Y5B9 1047 aaKnown RBP13.3□□□□□ -0.28
HULC-201ENST00000503668 RANGAP1P46060 587 aaPredicted RBP13.29□□□□□ -0.28
HULC-201ENST00000503668 OXER1Q8TDS5 423 aa13.29□□□□□ -0.28
HULC-201ENST00000503668 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
HULC-201ENST00000503668 TBC1D12O60347 775 aa13.28□□□□□ -0.28
HULC-201ENST00000503668 FMN1Q68DA7 1419 aa13.28□□□□□ -0.28
HULC-201ENST00000503668 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
HULC-201ENST00000503668 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
HULC-201ENST00000503668 HRO43593 1189 aa13.26□□□□□ -0.29
HULC-201ENST00000503668 GTPBP6O43824 516 aaPredicted RBP13.26□□□□□ -0.29
HULC-201ENST00000503668 UPF1Q92900 1129 aaKnown RBP eCLIP13.25□□□□□ -0.29
HULC-201ENST00000503668 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
HULC-201ENST00000503668 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
HULC-201ENST00000503668 PPP4R3BQ5MIZ7 849 aa13.23□□□□□ -0.29
HULC-201ENST00000503668 TK2O00142 265 aa13.22□□□□□ -0.29
HULC-201ENST00000503668 PPP1R15BQ5SWA1 713 aa13.22□□□□□ -0.29
HULC-201ENST00000503668 RYDENQ9NUL5 291 aaKnown RBP13.22□□□□□ -0.29
HULC-201ENST00000503668 PCF11O94913 1555 aaKnown RBP13.22□□□□□ -0.29
HULC-201ENST00000503668 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.29
HULC-201ENST00000503668 PPP1R15AO75807 674 aaPredicted RBP13.21□□□□□ -0.29
HULC-201ENST00000503668 FANCD2Q9BXW9 1451 aa13.2□□□□□ -0.3
HULC-201ENST00000503668 PDE4AP27815 886 aa13.18□□□□□ -0.3
HULC-201ENST00000503668 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
HULC-201ENST00000503668 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
HULC-201ENST00000503668 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
HULC-201ENST00000503668 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
HULC-201ENST00000503668 FGD6Q6ZV73 1430 aa13.17□□□□□ -0.3
HULC-201ENST00000503668 KCNK17Q96T54 332 aa13.17□□□□□ -0.3
HULC-201ENST00000503668 ANP32CO43423 234 aa13.16□□□□□ -0.3
HULC-201ENST00000503668 HCSTQ9UBK5 93 aa13.16□□□□□ -0.3
HULC-201ENST00000503668 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
HULC-201ENST00000503668 NEFLP07196 543 aa13.15□□□□□ -0.3
HULC-201ENST00000503668 FAM50AQ14320 339 aaKnown RBP13.15□□□□□ -0.3
HULC-201ENST00000503668 AKNAQ7Z591 1439 aa13.14□□□□□ -0.31
HULC-201ENST00000503668 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
HULC-201ENST00000503668 ZNF454Q8N9F8 522 aa13.14□□□□□ -0.31
HULC-201ENST00000503668 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
HULC-201ENST00000503668 SAMD9Q5K651 1589 aa13.14□□□□□ -0.31
HULC-201ENST00000503668 ITGAEP38570 1179 aa13.13□□□□□ -0.31
HULC-201ENST00000503668 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
HULC-201ENST00000503668 POLA1P09884 1462 aaPredicted RBP13.12□□□□□ -0.31
HULC-201ENST00000503668 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
HULC-201ENST00000503668 FOSBP53539 338 aa13.12□□□□□ -0.31
HULC-201ENST00000503668 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
HULC-201ENST00000503668 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
HULC-201ENST00000503668 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
HULC-201ENST00000503668 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
HULC-201ENST00000503668 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
HULC-201ENST00000503668 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
HULC-201ENST00000503668 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
HULC-201ENST00000503668 BCL2L12Q9HB09 334 aa13.1□□□□□ -0.31
HULC-201ENST00000503668 MYOM3Q5VTT5 1437 aa13.1□□□□□ -0.31
HULC-201ENST00000503668 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
HULC-201ENST00000503668 EVI5O60447 810 aa13.09□□□□□ -0.31
HULC-201ENST00000503668 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms