RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 ABCC10Q5T3U5 1492 aa32.92■■■□□ 2.86
DDX41-202ENST00000503078 E9PCH4 1651 aa32.91■■■□□ 2.86
DDX41-202ENST00000503078 SENP3-EIF4A1A0A087X0R7 540 aa32.91■■■□□ 2.86
DDX41-202ENST00000503078 PLEKHD1A6NEE1 506 aa32.9■■■□□ 2.86
DDX41-202ENST00000503078 KDM2AQ9Y2K7 1162 aa32.88■■■□□ 2.85
DDX41-202ENST00000503078 PTPRGP23470 1445 aa32.88■■■□□ 2.85
DDX41-202ENST00000503078 TSPY4P0CV99 314 aa32.86■■■□□ 2.85
DDX41-202ENST00000503078 TSPY10P0CW01 314 aa32.86■■■□□ 2.85
DDX41-202ENST00000503078 PAK3O75914 559 aaPredicted RBP32.85■■■□□ 2.85
DDX41-202ENST00000503078 DCAF11Q8TEB1 546 aa32.85■■■□□ 2.85
DDX41-202ENST00000503078 ANP32AP39687 249 aaKnown RBP32.84■■■□□ 2.85
DDX41-202ENST00000503078 SHROOM2Q13796 1616 aa32.82■■■□□ 2.84
DDX41-202ENST00000503078 IPO9Q96P70 1041 aaKnown RBP32.81■■■□□ 2.84
DDX41-202ENST00000503078 DEKP35659 375 aaKnown RBP32.8■■■□□ 2.84
DDX41-202ENST00000503078 ARHGEF5Q12774 1597 aa32.79■■■□□ 2.84
DDX41-202ENST00000503078 RRP1P56182 461 aaKnown RBP32.78■■■□□ 2.84
DDX41-202ENST00000503078 NLRP13Q86W25 1043 aa32.74■■■□□ 2.83
DDX41-202ENST00000503078 PARD3Q8TEW0 1356 aa32.74■■■□□ 2.83
DDX41-202ENST00000503078 TRPM1Q7Z4N2 1603 aa32.73■■■□□ 2.83
DDX41-202ENST00000503078 HNRNPMP52272 730 aaKnown RBP eCLIP32.73■■■□□ 2.83
DDX41-202ENST00000503078 FAM135AQ9P2D6 1515 aa32.72■■■□□ 2.83
DDX41-202ENST00000503078 RCAN3Q9UKA8 241 aa32.72■■■□□ 2.83
DDX41-202ENST00000503078 NBR1Q14596 966 aa32.71■■■□□ 2.83
DDX41-202ENST00000503078 PDE3BQ13370 1112 aa32.7■■■□□ 2.83
DDX41-202ENST00000503078 PRAG1Q86YV5 1406 aa32.7■■■□□ 2.83
DDX41-202ENST00000503078 ZBTB47Q9UFB7 747 aaPredicted RBP32.68■■■□□ 2.82
DDX41-202ENST00000503078 EXOC6Q8TAG9 804 aa32.68■■■□□ 2.82
DDX41-202ENST00000503078 CCDC141Q6ZP82 1450 aa32.66■■■□□ 2.82
DDX41-202ENST00000503078 CCDC144AA2RUR9 1427 aa32.64■■■□□ 2.82
DDX41-202ENST00000503078 TCERG1O14776 1098 aaKnown RBP32.62■■■□□ 2.81
DDX41-202ENST00000503078 PER1O15534 1290 aaPredicted RBP32.62■■■□□ 2.81
DDX41-202ENST00000503078 ERCC6L2Q5T890 1561 aa32.62■■■□□ 2.81
DDX41-202ENST00000503078 SAMD9LQ8IVG5 1584 aa32.62■■■□□ 2.81
DDX41-202ENST00000503078 SALL2Q9Y467 1007 aaPredicted RBP32.61■■■□□ 2.81
DDX41-202ENST00000503078 GPRASP1Q5JY77 1395 aa32.61■■■□□ 2.81
DDX41-202ENST00000503078 RSPH4AQ5TD94 716 aa32.59■■■□□ 2.81
DDX41-202ENST00000503078 WASHC2CQ9Y4E1 1318 aa32.58■■■□□ 2.81
DDX41-202ENST00000503078 LAMC1P11047 1609 aa32.58■■■□□ 2.81
DDX41-202ENST00000503078 COL17A1Q9UMD9 1497 aaPredicted RBP32.58■■■□□ 2.81
DDX41-202ENST00000503078 CDC42BPBQ9Y5S2 1711 aa32.57■■■□□ 2.8
DDX41-202ENST00000503078 PREX2Q70Z35 1606 aa32.57■■■□□ 2.8
DDX41-202ENST00000503078 NBPF1Q3BBV0 1214 aa32.56■■■□□ 2.8
DDX41-202ENST00000503078 INSRP06213 1382 aa32.56■■■□□ 2.8
DDX41-202ENST00000503078 CLASP1Q7Z460 1538 aa32.55■■■□□ 2.8
DDX41-202ENST00000503078 ZMYM4Q5VZL5 1548 aa32.54■■■□□ 2.8
DDX41-202ENST00000503078 PRDM15P57071 1507 aaPredicted RBP32.54■■■□□ 2.8
DDX41-202ENST00000503078 UNC13BO14795 1591 aa32.53■■■□□ 2.8
DDX41-202ENST00000503078 ABCC2Q92887 1545 aa32.53■■■□□ 2.8
DDX41-202ENST00000503078 A2MP01023 1474 aa32.53■■■□□ 2.8
DDX41-202ENST00000503078 RGL3Q3MIN7 710 aa32.52■■■□□ 2.8
DDX41-202ENST00000503078 PLA2R1Q13018 1463 aa32.52■■■□□ 2.8
DDX41-202ENST00000503078 BLMP54132 1417 aaPredicted RBP32.51■■■□□ 2.8
DDX41-202ENST00000503078 CDCA7LQ96GN5 454 aa32.51■■■□□ 2.79
DDX41-202ENST00000503078 MS4A1P11836 297 aa32.5■■■□□ 2.79
DDX41-202ENST00000503078 RTL5Q5HYW3 569 aaPredicted RBP32.5■■■□□ 2.79
DDX41-202ENST00000503078 PDE4AP27815 886 aa32.49■■■□□ 2.79
DDX41-202ENST00000503078 TESK2Q96S53 571 aa32.49■■■□□ 2.79
DDX41-202ENST00000503078 DISP3Q9P2K9 1392 aa32.49■■■□□ 2.79
DDX41-202ENST00000503078 MAST1Q9Y2H9 1570 aa32.48■■■□□ 2.79
DDX41-202ENST00000503078 EIF2AK4Q9P2K8 1649 aaKnown RBP32.46■■■□□ 2.79
DDX41-202ENST00000503078 CC2D1BQ5T0F9 858 aaKnown RBP32.46■■■□□ 2.79
DDX41-202ENST00000503078 BACH2Q9BYV9 841 aa32.45■■■□□ 2.79
DDX41-202ENST00000503078 ERBINQ96RT1 1412 aa32.45■■■□□ 2.79
DDX41-202ENST00000503078 MYO5CQ9NQX4 1742 aa32.45■■■□□ 2.78
DDX41-202ENST00000503078 SYCP2Q9BX26 1530 aa32.44■■■□□ 2.78
DDX41-202ENST00000503078 NPM2Q86SE8 214 aaKnown RBP32.44■■■□□ 2.78
DDX41-202ENST00000503078 PANK3Q9H999 370 aa32.43■■■□□ 2.78
DDX41-202ENST00000503078 PLEKHH2Q8IVE3 1493 aa32.42■■■□□ 2.78
DDX41-202ENST00000503078 IQGAP3Q86VI3 1631 aa32.42■■■□□ 2.78
DDX41-202ENST00000503078 TTC37Q6PGP7 1564 aa32.41■■■□□ 2.78
DDX41-202ENST00000503078 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.41■■■□□ 2.78
DDX41-202ENST00000503078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.39■■■□□ 2.783e-8■■■□□ 16.5
DDX41-202ENST00000503078 TMF1P82094 1093 aa32.39■■■□□ 2.78
DDX41-202ENST00000503078 PLIN1O60240 522 aa32.37■■■□□ 2.77
DDX41-202ENST00000503078 PLXNC1O60486 1568 aa32.36■■■□□ 2.77
DDX41-202ENST00000503078 ARHGAP5Q13017 1502 aa32.36■■■□□ 2.77
DDX41-202ENST00000503078 UHRF1BP1LA0JNW5 1464 aa32.35■■■□□ 2.77
DDX41-202ENST00000503078 ATP10AO60312 1499 aa32.35■■■□□ 2.77
DDX41-202ENST00000503078 CRBNQ96SW2 442 aa32.33■■■□□ 2.77
DDX41-202ENST00000503078 RNF17Q9BXT8 1623 aaKnown RBP32.31■■■□□ 2.76
DDX41-202ENST00000503078 ZCCHC11Q5TAX3 1644 aaKnown RBP32.3■■■□□ 2.76
DDX41-202ENST00000503078 MAGI2Q86UL8 1455 aa32.28■■■□□ 2.76
DDX41-202ENST00000503078 DUOX2Q9NRD8 1548 aa32.27■■■□□ 2.76
DDX41-202ENST00000503078 ADAMTS8Q9UP79 889 aa32.24■■■□□ 2.75
DDX41-202ENST00000503078 USP35Q9P2H5 1018 aa32.22■■■□□ 2.75
DDX41-202ENST00000503078 WDR7Q9Y4E6 1490 aa32.21■■■□□ 2.75
DDX41-202ENST00000503078 LAS1LQ9Y4W2 734 aaKnown RBP32.19■■■□□ 2.74
DDX41-202ENST00000503078 C20orf194Q5TEA3 1177 aa32.17■■■□□ 2.74
DDX41-202ENST00000503078 PLCH2O75038 1416 aa32.17■■■□□ 2.74
DDX41-202ENST00000503078 NEFMP07197 916 aa32.17■■■□□ 2.74
DDX41-202ENST00000503078 PPP2R1AP30153 589 aa32.17■■■□□ 2.74
DDX41-202ENST00000503078 DDRGK1Q96HY6 314 aa32.17■■■□□ 2.74
DDX41-202ENST00000503078 KNSTRNQ9Y448 316 aa32.17■■■□□ 2.74
DDX41-202ENST00000503078 PPM1GO15355 546 aaPredicted RBP32.16■■■□□ 2.74
DDX41-202ENST00000503078 KDM2BQ8NHM5 1336 aa32.16■■■□□ 2.74
DDX41-202ENST00000503078 SKAP1Q86WV1 359 aa32.16■■■□□ 2.74
DDX41-202ENST00000503078 IQGAP1P46940 1657 aa32.15■■■□□ 2.74
DDX41-202ENST00000503078 WDR43Q15061 677 aaKnown RBP eCLIP32.15■■■□□ 2.74
DDX41-202ENST00000503078 PLEKHH1Q9ULM0 1364 aa32.14■■■□□ 2.74
DDX41-202ENST00000503078 MADDQ8WXG6 1647 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms