RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 RTL5Q5HYW3 569 aaPredicted RBP10□□□□□ -0.81
PDGFC-203ENST00000502773 MYO5CQ9NQX4 1742 aa9.99□□□□□ -0.81
PDGFC-203ENST00000502773 TMF1P82094 1093 aa9.99□□□□□ -0.81
PDGFC-203ENST00000502773 FOXD1Q16676 465 aa9.99□□□□□ -0.81
PDGFC-203ENST00000502773 BCANQ96GW7 911 aa9.99□□□□□ -0.81
PDGFC-203ENST00000502773 POLR3GLQ9BT43 218 aa9.99□□□□□ -0.81
PDGFC-203ENST00000502773 PLXNC1O60486 1568 aa9.99□□□□□ -0.81
PDGFC-203ENST00000502773 TMC1Q8TDI8 760 aa9.99□□□□□ -0.81
PDGFC-203ENST00000502773 PRKRIP1Q9H875 184 aaPredicted RBP9.98□□□□□ -0.81
PDGFC-203ENST00000502773 HIRIP3Q9BW71 556 aaPredicted RBP9.98□□□□□ -0.81
PDGFC-203ENST00000502773 KDM2AQ9Y2K7 1162 aa9.97□□□□□ -0.81
PDGFC-203ENST00000502773 CLASP1Q7Z460 1538 aa9.97□□□□□ -0.81
PDGFC-203ENST00000502773 EIF2AK4Q9P2K8 1649 aaKnown RBP9.97□□□□□ -0.81
PDGFC-203ENST00000502773 FAM135AQ9P2D6 1515 aa9.97□□□□□ -0.81
PDGFC-203ENST00000502773 CCDC136Q96JN2 1154 aa9.96□□□□□ -0.81
PDGFC-203ENST00000502773 KIF7Q2M1P5 1343 aa9.96□□□□□ -0.82
PDGFC-203ENST00000502773 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.96□□□□□ -0.82
PDGFC-203ENST00000502773 GLIPR1L2Q4G1C9 344 aa9.95□□□□□ -0.82
PDGFC-203ENST00000502773 SYCP2Q9BX26 1530 aa9.95□□□□□ -0.82
PDGFC-203ENST00000502773 NBPF8Q3BBV2 869 aa9.95□□□□□ -0.82
PDGFC-203ENST00000502773 SUPT16HQ9Y5B9 1047 aaKnown RBP9.95□□□□□ -0.82
PDGFC-203ENST00000502773 ATP10AO60312 1499 aa9.95□□□□□ -0.82
PDGFC-203ENST00000502773 SAMD9LQ8IVG5 1584 aa9.95□□□□□ -0.82
PDGFC-203ENST00000502773 ZBED9Q6R2W3 1325 aa9.94□□□□□ -0.82
PDGFC-203ENST00000502773 KDM6BO15054 1643 aa9.93□□□□□ -0.82
PDGFC-203ENST00000502773 FKBP8Q14318 412 aa9.93□□□□□ -0.82
PDGFC-203ENST00000502773 CFAP74Q9C0B2 1584 aa9.93□□□□□ -0.82
PDGFC-203ENST00000502773 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
PDGFC-203ENST00000502773 UNC13BO14795 1591 aa9.93□□□□□ -0.82
PDGFC-203ENST00000502773 PDE3BQ13370 1112 aa9.93□□□□□ -0.82
PDGFC-203ENST00000502773 BRD4O60885 1362 aaPredicted RBP9.92□□□□□ -0.82
PDGFC-203ENST00000502773 DENND4BO75064 1496 aaPredicted RBP9.92□□□□□ -0.82
PDGFC-203ENST00000502773 MYBBP1AQ9BQG0 1328 aaKnown RBP9.92□□□□□ -0.82
PDGFC-203ENST00000502773 SCAPERQ9BY12 1400 aa9.91□□□□□ -0.82
PDGFC-203ENST00000502773 FAM9BQ8IZU0 186 aa9.91□□□□□ -0.82
PDGFC-203ENST00000502773 ANO8Q9HCE9 1232 aaPredicted RBP9.91□□□□□ -0.82
PDGFC-203ENST00000502773 RTN4Q9NQC3 1192 aaKnown RBP9.91□□□□□ -0.82
PDGFC-203ENST00000502773 ZCCHC11Q5TAX3 1644 aaKnown RBP9.91□□□□□ -0.82
PDGFC-203ENST00000502773 FANCAO15360 1455 aa9.91□□□□□ -0.82
PDGFC-203ENST00000502773 NGEFQ8N5V2 710 aa9.91□□□□□ -0.82
PDGFC-203ENST00000502773 DHX29Q7Z478 1369 aaKnown RBP9.91□□□□□ -0.82
PDGFC-203ENST00000502773 RGL3Q3MIN7 710 aa9.9□□□□□ -0.82
PDGFC-203ENST00000502773 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
PDGFC-203ENST00000502773 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.9□□□□□ -0.82
PDGFC-203ENST00000502773 ABCC1P33527 1531 aa9.9□□□□□ -0.82
PDGFC-203ENST00000502773 RPGRIP1LQ68CZ1 1315 aa9.9□□□□□ -0.82
PDGFC-203ENST00000502773 IQGAP3Q86VI3 1631 aa9.9□□□□□ -0.82
PDGFC-203ENST00000502773 CDC42BPBQ9Y5S2 1711 aa9.9□□□□□ -0.82
PDGFC-203ENST00000502773 GPRASP1Q5JY77 1395 aa9.89□□□□□ -0.83
PDGFC-203ENST00000502773 ADGRL1O94910 1474 aa9.89□□□□□ -0.83
PDGFC-203ENST00000502773 INSRP06213 1382 aa9.89□□□□□ -0.83
PDGFC-203ENST00000502773 KNSTRNQ9Y448 316 aa9.89□□□□□ -0.83
PDGFC-203ENST00000502773 ST20-MTHFSA0A0A6YYL1 179 aa9.89□□□□□ -0.83
PDGFC-203ENST00000502773 KIF3BO15066 747 aa9.89□□□□□ -0.83
PDGFC-203ENST00000502773 ZNF518AQ6AHZ1 1483 aa9.88□□□□□ -0.83
PDGFC-203ENST00000502773 PPP4R2Q9NY27 417 aa9.88□□□□□ -0.83
PDGFC-203ENST00000502773 TTC37Q6PGP7 1564 aa9.88□□□□□ -0.83
PDGFC-203ENST00000502773 PRAG1Q86YV5 1406 aa9.88□□□□□ -0.83
PDGFC-203ENST00000502773 POLR1AO95602 1720 aaPredicted RBP9.87□□□□□ -0.83
PDGFC-203ENST00000502773 MAGI2Q86UL8 1455 aa9.87□□□□□ -0.83
PDGFC-203ENST00000502773 PODXL2Q9NZ53 605 aa9.86□□□□□ -0.83
PDGFC-203ENST00000502773 LAMC1P11047 1609 aa9.86□□□□□ -0.83
PDGFC-203ENST00000502773 PPP6R1Q9UPN7 881 aa9.86□□□□□ -0.83
PDGFC-203ENST00000502773 ASXL2Q76L83 1435 aa9.86□□□□□ -0.83
PDGFC-203ENST00000502773 NEURL4Q96JN8 1562 aa9.85□□□□□ -0.83
PDGFC-203ENST00000502773 ATP7AQ04656 1500 aa9.85□□□□□ -0.83
PDGFC-203ENST00000502773 CD109Q6YHK3 1445 aa9.84□□□□□ -0.83
PDGFC-203ENST00000502773 NEO1Q92859 1461 aa9.84□□□□□ -0.83
PDGFC-203ENST00000502773 ABCA9Q8IUA7 1624 aa9.84□□□□□ -0.83
PDGFC-203ENST00000502773 WDR43Q15061 677 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDGFC-203ENST00000502773 KDM5CP41229 1560 aa9.83□□□□□ -0.84
PDGFC-203ENST00000502773 AFAP1Q8N556 730 aa9.83□□□□□ -0.84
PDGFC-203ENST00000502773 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-203ENST00000502773 TRAPPC8Q9Y2L5 1435 aa9.83□□□□□ -0.84
PDGFC-203ENST00000502773 NUDCQ9Y266 331 aa9.83□□□□□ -0.84
PDGFC-203ENST00000502773 PTPRTO14522 1441 aa9.82□□□□□ -0.84
PDGFC-203ENST00000502773 VGFO15240 615 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-203ENST00000502773 HDGFP51858 240 aaKnown RBP9.82□□□□□ -0.84
PDGFC-203ENST00000502773 SCAF11Q99590 1463 aaKnown RBP9.81□□□□□ -0.84
PDGFC-203ENST00000502773 TRPM2O94759 1503 aa9.81□□□□□ -0.84
PDGFC-203ENST00000502773 PUS7Q96PZ0 661 aaKnown RBP9.81□□□□□ -0.84
PDGFC-203ENST00000502773 PRDM15P57071 1507 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-203ENST00000502773 ZMYM4Q5VZL5 1548 aa9.81□□□□□ -0.84
PDGFC-203ENST00000502773 NBR1Q14596 966 aa9.81□□□□□ -0.84
PDGFC-203ENST00000502773 TET3O43151 1660 aa9.81□□□□□ -0.84
PDGFC-203ENST00000502773 A2MP01023 1474 aa9.8□□□□□ -0.84
PDGFC-203ENST00000502773 SMG6Q86US8 1419 aaKnown RBP9.8□□□□□ -0.84
PDGFC-203ENST00000502773 SLC52A1Q9NWF4 448 aa9.8□□□□□ -0.84
PDGFC-203ENST00000502773 MLH3Q9UHC1 1453 aa9.8□□□□□ -0.84
PDGFC-203ENST00000502773 ZFYVE16Q7Z3T8 1539 aa9.8□□□□□ -0.84
PDGFC-203ENST00000502773 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-203ENST00000502773 ESF1Q9H501 851 aaKnown RBP9.79□□□□□ -0.84
PDGFC-203ENST00000502773 NPC1L1Q9UHC9 1359 aa9.79□□□□□ -0.84
PDGFC-203ENST00000502773 CHGAP10645 457 aaKnown RBP9.78□□□□□ -0.84
PDGFC-203ENST00000502773 PNISRQ8TF01 805 aaKnown RBP9.78□□□□□ -0.84
PDGFC-203ENST00000502773 CFAP53Q96M91 514 aa9.78□□□□□ -0.84
PDGFC-203ENST00000502773 LMTK2Q8IWU2 1503 aa9.78□□□□□ -0.84
PDGFC-203ENST00000502773 COL17A1Q9UMD9 1497 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-203ENST00000502773 ERCC6L2Q5T890 1561 aa9.78□□□□□ -0.84
PDGFC-203ENST00000502773 PKNOX2Q96KN3 472 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms