RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
CRNDE-202ENST00000502066 POTEEQ6S8J3 1075 aa13.85□□□□□ -0.19
CRNDE-202ENST00000502066 SLC34A2O95436 690 aa13.83□□□□□ -0.2
CRNDE-202ENST00000502066 PTGER2P43116 358 aa13.79□□□□□ -0.2
CRNDE-202ENST00000502066 SNAPC4Q5SXM2 1469 aa13.78□□□□□ -0.2
CRNDE-202ENST00000502066 CFTRP13569 1480 aa13.77□□□□□ -0.21
CRNDE-202ENST00000502066 PCF11O94913 1555 aaKnown RBP13.75□□□□□ -0.21
CRNDE-202ENST00000502066 PBX2P40425 430 aa13.74□□□□□ -0.21
CRNDE-202ENST00000502066 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
CRNDE-202ENST00000502066 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
CRNDE-202ENST00000502066 PLPP6Q8IY26 295 aa13.72□□□□□ -0.21
CRNDE-202ENST00000502066 MAPKBP1O60336 1514 aa13.71□□□□□ -0.21
CRNDE-202ENST00000502066 HSPA2P54652 639 aa13.7□□□□□ -0.22
CRNDE-202ENST00000502066 MROH2BQ7Z745 1585 aa13.7□□□□□ -0.22
CRNDE-202ENST00000502066 CHGAP10645 457 aaKnown RBP13.69□□□□□ -0.22
CRNDE-202ENST00000502066 HS6ST3Q8IZP7 471 aa13.69□□□□□ -0.22
CRNDE-202ENST00000502066 DSG2Q14126 1118 aa13.68□□□□□ -0.22
CRNDE-202ENST00000502066 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
CRNDE-202ENST00000502066 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
CRNDE-202ENST00000502066 ARHGAP33O14559 1287 aa13.67□□□□□ -0.22
CRNDE-202ENST00000502066 FOXK1P85037 733 aa13.67□□□□□ -0.22
CRNDE-202ENST00000502066 PSEN2P49810 448 aa13.66□□□□□ -0.22
CRNDE-202ENST00000502066 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
CRNDE-202ENST00000502066 ADGRD1Q6QNK2 874 aa13.65□□□□□ -0.22
CRNDE-202ENST00000502066 TDRD9Q8NDG6 1382 aaKnown RBP13.65□□□□□ -0.22
CRNDE-202ENST00000502066 DMRTA1Q5VZB9 504 aa13.64□□□□□ -0.23
CRNDE-202ENST00000502066 MED1Q15648 1581 aaPredicted RBP13.63□□□□□ -0.23
CRNDE-202ENST00000502066 PTPRMP28827 1452 aa13.63□□□□□ -0.23
CRNDE-202ENST00000502066 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
CRNDE-202ENST00000502066 NKX1-1Q15270 411 aaPredicted RBP13.61□□□□□ -0.23
CRNDE-202ENST00000502066 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
CRNDE-202ENST00000502066 PSDA5PKW4 1024 aaPredicted RBP13.6□□□□□ -0.23
CRNDE-202ENST00000502066 PPRC1Q5VV67 1664 aaKnown RBP13.59□□□□□ -0.23
CRNDE-202ENST00000502066 UPF1Q92900 1129 aaKnown RBP eCLIP13.57□□□□□ -0.24
CRNDE-202ENST00000502066 TBC1D12O60347 775 aa13.56□□□□□ -0.24
CRNDE-202ENST00000502066 PPP4R3BQ5MIZ7 849 aa13.55□□□□□ -0.24
CRNDE-202ENST00000502066 IFFO2Q5TF58 517 aa13.55□□□□□ -0.24
CRNDE-202ENST00000502066 HCSTQ9UBK5 93 aa13.55□□□□□ -0.24
CRNDE-202ENST00000502066 PLA2G2EQ9NZK7 142 aa13.54□□□□□ -0.24
CRNDE-202ENST00000502066 KCNK17Q96T54 332 aa13.53□□□□□ -0.24
CRNDE-202ENST00000502066 HRO43593 1189 aa13.52□□□□□ -0.25
CRNDE-202ENST00000502066 ABCC8Q09428 1581 aa13.51□□□□□ -0.25
CRNDE-202ENST00000502066 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
CRNDE-202ENST00000502066 TK2O00142 265 aa13.5□□□□□ -0.25
CRNDE-202ENST00000502066 KIF21BO75037 1637 aa13.5□□□□□ -0.25
CRNDE-202ENST00000502066 OXER1Q8TDS5 423 aa13.49□□□□□ -0.25
CRNDE-202ENST00000502066 KCTD12Q96CX2 325 aaKnown RBP13.49□□□□□ -0.25
CRNDE-202ENST00000502066 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
CRNDE-202ENST00000502066 PRDM2Q13029 1718 aa13.48□□□□□ -0.25
CRNDE-202ENST00000502066 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
CRNDE-202ENST00000502066 STAC3Q96MF2 364 aa13.46□□□□□ -0.25
CRNDE-202ENST00000502066 CRISPLD2Q9H0B8 497 aa13.46□□□□□ -0.25
CRNDE-202ENST00000502066 POLA1P09884 1462 aaPredicted RBP13.46□□□□□ -0.25
CRNDE-202ENST00000502066 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.26
CRNDE-202ENST00000502066 GRIN2BQ13224 1484 aa13.45□□□□□ -0.26
CRNDE-202ENST00000502066 ADAMTSL3P82987 1691 aa13.44□□□□□ -0.26
CRNDE-202ENST00000502066 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
CRNDE-202ENST00000502066 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
CRNDE-202ENST00000502066 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
CRNDE-202ENST00000502066 VPS9D1Q9Y2B5 631 aa13.41□□□□□ -0.26
CRNDE-202ENST00000502066 SOGA1O94964 1423 aa13.4□□□□□ -0.26
CRNDE-202ENST00000502066 KCNH8Q96L42 1107 aa13.4□□□□□ -0.26
CRNDE-202ENST00000502066 PTPN5P54829 565 aa13.38□□□□□ -0.27
CRNDE-202ENST00000502066 UBAP1LF5GYI3 381 aa13.37□□□□□ -0.27
CRNDE-202ENST00000502066 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
CRNDE-202ENST00000502066 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
CRNDE-202ENST00000502066 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
CRNDE-202ENST00000502066 PDE4AP27815 886 aa13.36□□□□□ -0.27
CRNDE-202ENST00000502066 FOSBP53539 338 aa13.35□□□□□ -0.27
CRNDE-202ENST00000502066 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
CRNDE-202ENST00000502066 BCL2L12Q9HB09 334 aa13.35□□□□□ -0.27
CRNDE-202ENST00000502066 GLI2P10070 1586 aa13.34□□□□□ -0.27
CRNDE-202ENST00000502066 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
CRNDE-202ENST00000502066 IQSEC2Q5JU85 1478 aa13.34□□□□□ -0.27
CRNDE-202ENST00000502066 WIZO95785 1651 aa13.34□□□□□ -0.27
CRNDE-202ENST00000502066 SRCAPQ6ZRS2 3230 aa13.34□□□□□ -0.27
CRNDE-202ENST00000502066 HSPA1LP34931 641 aa13.33□□□□□ -0.28
CRNDE-202ENST00000502066 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
CRNDE-202ENST00000502066 EVI5O60447 810 aa13.32□□□□□ -0.28
CRNDE-202ENST00000502066 TEX14Q8IWB6 1497 aa13.31□□□□□ -0.28
CRNDE-202ENST00000502066 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
CRNDE-202ENST00000502066 PTPREP23469 700 aa13.3□□□□□ -0.28
CRNDE-202ENST00000502066 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
CRNDE-202ENST00000502066 LTBP4Q8N2S1 1624 aa13.29□□□□□ -0.28
CRNDE-202ENST00000502066 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
CRNDE-202ENST00000502066 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
CRNDE-202ENST00000502066 DDX27Q96GQ7 796 aaKnown RBP13.28□□□□□ -0.28
CRNDE-202ENST00000502066 ZBED2Q9BTP6 218 aa13.28□□□□□ -0.28
CRNDE-202ENST00000502066 NUP160Q12769 1436 aa13.28□□□□□ -0.28
CRNDE-202ENST00000502066 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
CRNDE-202ENST00000502066 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
CRNDE-202ENST00000502066 STRCQ7RTU9 1775 aa13.26□□□□□ -0.29
CRNDE-202ENST00000502066 ZDHHC16Q969W1 377 aa13.26□□□□□ -0.29
CRNDE-202ENST00000502066 JPH4Q96JJ6 628 aa13.26□□□□□ -0.29
CRNDE-202ENST00000502066 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
CRNDE-202ENST00000502066 SLC4A5Q9BY07 1137 aa13.25□□□□□ -0.29
CRNDE-202ENST00000502066 RGS17Q9UGC6 210 aaPredicted RBP13.25□□□□□ -0.29
CRNDE-202ENST00000502066 RIMS1Q86UR5 1692 aaKnown RBP13.24□□□□□ -0.29
CRNDE-202ENST00000502066 GOLGA8CPA6NN73 597 aa13.24□□□□□ -0.29
CRNDE-202ENST00000502066 EMILIN3Q9NT22 766 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms