RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TNS2Q63HR2 1409 aa2.21□□□□□ -2.05
XRN1-214ENST00000498077 SP5Q6BEB4 398 aaPredicted RBP2.21□□□□□ -2.06
XRN1-214ENST00000498077 SETD1AO15047 1707 aaKnown RBP2.21□□□□□ -2.06
XRN1-214ENST00000498077 SETBP1Q9Y6X0 1596 aa2.21□□□□□ -2.06
XRN1-214ENST00000498077 POGZQ7Z3K3 1410 aa2.21□□□□□ -2.06
XRN1-214ENST00000498077 ABCC8Q09428 1581 aa2.21□□□□□ -2.06
XRN1-214ENST00000498077 MAP3K13O43283 966 aa2.21□□□□□ -2.06
XRN1-214ENST00000498077 HSPA1LP34931 641 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 TBC1D8BQ0IIM8 1120 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 PHLDB1Q86UU1 1377 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 NWD1Q149M9 1564 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 TULP1O00294 542 aaPredicted RBP2.2□□□□□ -2.06
XRN1-214ENST00000498077 RGS19P49795 217 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 HDGFP51858 240 aaKnown RBP2.2□□□□□ -2.06
XRN1-214ENST00000498077 RAB15P59190 212 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 MLLT1Q03111 559 aaPredicted RBP2.2□□□□□ -2.06
XRN1-214ENST00000498077 SNX27Q96L92 541 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 PYGBP11216 843 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 PLB1Q6P1J6 1458 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 BOLA1Q9Y3E2 137 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 CCDC61Q9Y6R9 512 aa2.2□□□□□ -2.06
XRN1-214ENST00000498077 BMP2KQ9NSY1 1161 aaPredicted RBP2.19□□□□□ -2.06
XRN1-214ENST00000498077 WWC3Q9ULE0 1092 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 TRIM35Q9UPQ4 493 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 ERBB3P21860 1342 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 DLL1O00548 723 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 HSPA6P17066 643 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 APLP1P51693 650 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 WDR70Q9NW82 654 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 STK24Q9Y6E0 443 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 KDM5CP41229 1560 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 EIF4G3O43432 1585 aaKnown RBP2.19□□□□□ -2.06
XRN1-214ENST00000498077 LOC100996750A0A140TA64 210 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 TTLL13PA6NNM8 815 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 GALR2O43603 387 aaPredicted RBP2.19□□□□□ -2.06
XRN1-214ENST00000498077 KRTAP4-6Q9BYQ5 205 aa2.19□□□□□ -2.06
XRN1-214ENST00000498077 MAGI1Q96QZ7 1491 aaPredicted RBP2.19□□□□□ -2.06
XRN1-214ENST00000498077 RASEFQ8IZ41 740 aa2.18□□□□□ -2.06
XRN1-214ENST00000498077 ZNF784Q8NCA9 323 aaPredicted RBP2.18□□□□□ -2.06
XRN1-214ENST00000498077 DAXXQ9UER7 740 aaPredicted RBP2.18□□□□□ -2.06
XRN1-214ENST00000498077 YTHDC2Q9H6S0 1430 aaKnown RBP2.18□□□□□ -2.06
XRN1-214ENST00000498077 CABP2Q9NPB3 220 aa2.18□□□□□ -2.06
XRN1-214ENST00000498077 ARIH1Q9Y4X5 557 aaPredicted RBP2.18□□□□□ -2.06
XRN1-214ENST00000498077 STRCQ7RTU9 1775 aa2.18□□□□□ -2.06
XRN1-214ENST00000498077 ATN1P54259 1190 aaPredicted RBP2.18□□□□□ -2.06
XRN1-214ENST00000498077 RGS17Q9UGC6 210 aaPredicted RBP2.18□□□□□ -2.06
XRN1-214ENST00000498077 PBX2P40425 430 aa2.17□□□□□ -2.06
XRN1-214ENST00000498077 EMP3P54852 163 aa2.17□□□□□ -2.06
XRN1-214ENST00000498077 COL17A1Q9UMD9 1497 aaPredicted RBP2.17□□□□□ -2.06
XRN1-214ENST00000498077 PPRC1Q5VV67 1664 aaKnown RBP2.17□□□□□ -2.06
XRN1-214ENST00000498077 MNX1P50219 401 aaPredicted RBP2.17□□□□□ -2.06
XRN1-214ENST00000498077 RTL5Q5HYW3 569 aaPredicted RBP2.17□□□□□ -2.06
XRN1-214ENST00000498077 CADPSQ9ULU8 1353 aa2.17□□□□□ -2.06
XRN1-214ENST00000498077 PDE4AP27815 886 aa2.17□□□□□ -2.06
XRN1-214ENST00000498077 NOP2P46087 812 aaKnown RBP2.17□□□□□ -2.06
XRN1-214ENST00000498077 FOXK2Q01167 660 aa2.17□□□□□ -2.06
XRN1-214ENST00000498077 TTC37Q6PGP7 1564 aa2.17□□□□□ -2.06
XRN1-214ENST00000498077 RSPH4AQ5TD94 716 aa2.17□□□□□ -2.06
XRN1-214ENST00000498077 RGS20O76081 388 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 PPP4R3BQ5MIZ7 849 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 POTEAQ6S8J7 498 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 IGFLR1Q9H665 355 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 UHRF1BP1Q6BDS2 1440 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 IFNL1Q8IU54 200 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 USP19O94966 1318 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 MADDQ8WXG6 1647 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 EVX2Q03828 476 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 NBPF20Q3BBV1 942 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 JMYQ8N9B5 988 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 LRRC7Q96NW7 1537 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 PRPF38BQ5VTL8 546 aaKnown RBP2.16□□□□□ -2.06
XRN1-214ENST00000498077 PCDHB8Q9UN66 801 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 KIF21BO75037 1637 aa2.16□□□□□ -2.06
XRN1-214ENST00000498077 CDK13Q14004 1512 aaKnown RBP2.15□□□□□ -2.06
XRN1-214ENST00000498077 RIMS1Q86UR5 1692 aaKnown RBP2.15□□□□□ -2.07
XRN1-214ENST00000498077 MAP3K4Q9Y6R4 1608 aa2.15□□□□□ -2.07
XRN1-214ENST00000498077 STK25O00506 426 aa2.15□□□□□ -2.07
XRN1-214ENST00000498077 SHROOM2Q13796 1616 aa2.15□□□□□ -2.07
XRN1-214ENST00000498077 WDR7Q9Y4E6 1490 aa2.15□□□□□ -2.07
XRN1-214ENST00000498077 RNF17Q9BXT8 1623 aaKnown RBP2.15□□□□□ -2.07
XRN1-214ENST00000498077 BICDL1Q6ZP65 573 aa2.15□□□□□ -2.07
XRN1-214ENST00000498077 TCOF1Q13428 1488 aaKnown RBP2.15□□□□□ -2.07
XRN1-214ENST00000498077 SMYD5Q6GMV2 418 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 SYNMO15061 1565 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 TSPOAP1O95153 1857 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 CHD4Q14839 1912 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 AMER1Q5JTC6 1135 aaPredicted RBP2.14□□□□□ -2.07
XRN1-214ENST00000498077 ASXL2Q76L83 1435 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 LRRC9Q6ZRR7 1453 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 ATAD2BQ9ULI0 1458 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 UNC13BO14795 1591 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 POTEMA6NI47 508 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 FCHSD2O94868 740 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 PLA2G5P39877 138 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 POTEGQ6S5H5 508 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 CDAN1Q8IWY9 1227 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 SCRIBQ14160 1630 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 SLAIN2Q9P270 581 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 KDM5BQ9UGL1 1544 aa2.14□□□□□ -2.07
XRN1-214ENST00000498077 RXRBP28702 533 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms