RNA–Protein interactions for RNA: ENST00000497227.1

CARMIL1-204, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 3

Gene CARMIL1, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-204ENST00000497227 SPNS2Q8IVW8 549 aa8.67□□□□□ -1.02
CARMIL1-204ENST00000497227 CFAP43Q8NDM7 1665 aa8.67□□□□□ -1.02
CARMIL1-204ENST00000497227 RTN4Q9NQC3 1192 aaKnown RBP8.67□□□□□ -1.02
CARMIL1-204ENST00000497227 ADAMTSL3P82987 1691 aa8.66□□□□□ -1.02
CARMIL1-204ENST00000497227 KIF21BO75037 1637 aa8.66□□□□□ -1.02
CARMIL1-204ENST00000497227 PRXQ9BXM0 1461 aa8.66□□□□□ -1.02
CARMIL1-204ENST00000497227 TMEM121BQ9BXQ6 578 aaPredicted RBP8.66□□□□□ -1.02
CARMIL1-204ENST00000497227 PHLDB1Q86UU1 1377 aa8.65□□□□□ -1.02
CARMIL1-204ENST00000497227 ZNF467Q7Z7K2 595 aaPredicted RBP8.65□□□□□ -1.02
CARMIL1-204ENST00000497227 HSPA2P54652 639 aa8.64□□□□□ -1.03
CARMIL1-204ENST00000497227 IFNL1Q8IU54 200 aa8.64□□□□□ -1.03
CARMIL1-204ENST00000497227 GOLGA3Q08378 1498 aa8.64□□□□□ -1.03
CARMIL1-204ENST00000497227 CHRM1P11229 460 aaPredicted RBP8.63□□□□□ -1.03
CARMIL1-204ENST00000497227 LMTK3Q96Q04 1460 aa8.63□□□□□ -1.03
CARMIL1-204ENST00000497227 SNPHO15079 494 aa8.61□□□□□ -1.03
CARMIL1-204ENST00000497227 ARID4BQ4LE39 1312 aaPredicted RBP8.6□□□□□ -1.03
CARMIL1-204ENST00000497227 NEO1Q92859 1461 aa8.6□□□□□ -1.03
CARMIL1-204ENST00000497227 PLCG2P16885 1265 aa8.6□□□□□ -1.03
CARMIL1-204ENST00000497227 ILDR2Q71H61 639 aa8.6□□□□□ -1.03
CARMIL1-204ENST00000497227 CERKQ8TCT0 537 aa8.6□□□□□ -1.03
CARMIL1-204ENST00000497227 PCDHB8Q9UN66 801 aa8.6□□□□□ -1.03
CARMIL1-204ENST00000497227 ABCA9Q8IUA7 1624 aa8.6□□□□□ -1.03
CARMIL1-204ENST00000497227 FRMPD1Q5SYB0 1578 aa8.6□□□□□ -1.03
CARMIL1-204ENST00000497227 IRX5P78411 483 aaPredicted RBP8.59□□□□□ -1.03
CARMIL1-204ENST00000497227 PCF11O94913 1555 aaKnown RBP8.59□□□□□ -1.03
CARMIL1-204ENST00000497227 BCORL1Q5H9F3 1711 aa8.59□□□□□ -1.03
CARMIL1-204ENST00000497227 MADDQ8WXG6 1647 aa8.58□□□□□ -1.04
CARMIL1-204ENST00000497227 TMEM106CQ9BVX2 250 aa8.58□□□□□ -1.04
CARMIL1-204ENST00000497227 FHOD3Q2V2M9 1422 aa8.57□□□□□ -1.04
CARMIL1-204ENST00000497227 CTTNBP2Q8WZ74 1663 aa8.57□□□□□ -1.04
CARMIL1-204ENST00000497227 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
CARMIL1-204ENST00000497227 AKNAQ7Z591 1439 aa8.56□□□□□ -1.04
CARMIL1-204ENST00000497227 YEATS2Q9ULM3 1422 aa8.56□□□□□ -1.04
CARMIL1-204ENST00000497227 PLEKHD1A6NEE1 506 aa8.56□□□□□ -1.04
CARMIL1-204ENST00000497227 SIGLEC1Q9BZZ2 1709 aa8.55□□□□□ -1.04
CARMIL1-204ENST00000497227 CEBPAP49715 358 aaPredicted RBP8.55□□□□□ -1.04
CARMIL1-204ENST00000497227 GOLGA2Q08379 1002 aa8.55□□□□□ -1.04
CARMIL1-204ENST00000497227 OCEL1Q9H607 264 aa8.55□□□□□ -1.04
CARMIL1-204ENST00000497227 DENND4BO75064 1496 aaPredicted RBP8.55□□□□□ -1.04
CARMIL1-204ENST00000497227 PDAP1Q13442 181 aaKnown RBP8.54□□□□□ -1.04
CARMIL1-204ENST00000497227 MLECQ14165 292 aa8.54□□□□□ -1.04
CARMIL1-204ENST00000497227 SAMD9Q5K651 1589 aa8.53□□□□□ -1.04
CARMIL1-204ENST00000497227 ECM2O94769 699 aaPredicted RBP8.53□□□□□ -1.04
CARMIL1-204ENST00000497227 PSEN1P49768 467 aa8.53□□□□□ -1.04
CARMIL1-204ENST00000497227 FAM9AQ8IZU1 332 aaPredicted RBP8.53□□□□□ -1.04
CARMIL1-204ENST00000497227 RANGAP1P46060 587 aaPredicted RBP8.52□□□□□ -1.05
CARMIL1-204ENST00000497227 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.52□□□□□ -1.05
CARMIL1-204ENST00000497227 TAOK2Q9UL54 1235 aa8.52□□□□□ -1.05
CARMIL1-204ENST00000497227 RICTORQ6R327 1708 aa8.51□□□□□ -1.05
CARMIL1-204ENST00000497227 RAPGEF6Q8TEU7 1601 aa8.51□□□□□ -1.05
CARMIL1-204ENST00000497227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.51□□□□□ -1.05
CARMIL1-204ENST00000497227 RIMS1Q86UR5 1692 aaKnown RBP8.51□□□□□ -1.05
CARMIL1-204ENST00000497227 SOCS7O14512 581 aa8.51□□□□□ -1.05
CARMIL1-204ENST00000497227 FANCAO15360 1455 aa8.51□□□□□ -1.05
CARMIL1-204ENST00000497227 RIOK3O14730 519 aaKnown RBP8.5□□□□□ -1.05
CARMIL1-204ENST00000497227 ARHGEF40Q8TER5 1519 aa8.49□□□□□ -1.05
CARMIL1-204ENST00000497227 SCAPERQ9BY12 1400 aa8.49□□□□□ -1.05
CARMIL1-204ENST00000497227 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
CARMIL1-204ENST00000497227 PLCH2O75038 1416 aa8.48□□□□□ -1.05
CARMIL1-204ENST00000497227 MARVELD3Q96A59 401 aa8.48□□□□□ -1.05
CARMIL1-204ENST00000497227 MAGI2Q86UL8 1455 aa8.48□□□□□ -1.05
CARMIL1-204ENST00000497227 ZMYM4Q5VZL5 1548 aa8.48□□□□□ -1.05
CARMIL1-204ENST00000497227 HECW1Q76N89 1606 aa8.47□□□□□ -1.05
CARMIL1-204ENST00000497227 POGZQ7Z3K3 1410 aa8.47□□□□□ -1.05
CARMIL1-204ENST00000497227 ATP10AO60312 1499 aa8.47□□□□□ -1.05
CARMIL1-204ENST00000497227 VGFO15240 615 aaPredicted RBP8.47□□□□□ -1.05
CARMIL1-204ENST00000497227 MKRN3Q13064 507 aaKnown RBP8.47□□□□□ -1.05
CARMIL1-204ENST00000497227 ARHGEF12Q9NZN5 1544 aa8.47□□□□□ -1.05
CARMIL1-204ENST00000497227 DISP3Q9P2K9 1392 aa8.47□□□□□ -1.05
CARMIL1-204ENST00000497227 STRCQ7RTU9 1775 aa8.46□□□□□ -1.05
CARMIL1-204ENST00000497227 PKD2Q13563 968 aa8.46□□□□□ -1.06
CARMIL1-204ENST00000497227 TTC37Q6PGP7 1564 aa8.46□□□□□ -1.06
CARMIL1-204ENST00000497227 ZFYVE16Q7Z3T8 1539 aa8.45□□□□□ -1.06
CARMIL1-204ENST00000497227 EFCAB2Q5VUJ9 269 aa8.45□□□□□ -1.06
CARMIL1-204ENST00000497227 CABP2Q9NPB3 220 aa8.44□□□□□ -1.06
CARMIL1-204ENST00000497227 CDK13Q14004 1512 aaKnown RBP8.44□□□□□ -1.06
CARMIL1-204ENST00000497227 SETD1BQ9UPS6 1966 aaKnown RBP8.43□□□□□ -1.06
CARMIL1-204ENST00000497227 RNF25Q96BH1 459 aaPredicted RBP8.43□□□□□ -1.06
CARMIL1-204ENST00000497227 KRTAP3-3Q9BYR6 98 aa8.42□□□□□ -1.06
CARMIL1-204ENST00000497227 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
CARMIL1-204ENST00000497227 EFCAB5A4FU69 1503 aa8.42□□□□□ -1.06
CARMIL1-204ENST00000497227 LTBP4Q8N2S1 1624 aa8.41□□□□□ -1.06
CARMIL1-204ENST00000497227 PTPRTO14522 1441 aa8.41□□□□□ -1.06
CARMIL1-204ENST00000497227 C9orf84Q5VXU9 1444 aa8.41□□□□□ -1.06
CARMIL1-204ENST00000497227 EMP3P54852 163 aa8.41□□□□□ -1.06
CARMIL1-204ENST00000497227 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.4□□□□□ -1.06
CARMIL1-204ENST00000497227 POTEB3A0JP26 581 aa8.4□□□□□ -1.06
CARMIL1-204ENST00000497227 POTEBQ6S5H4 581 aa8.4□□□□□ -1.06
CARMIL1-204ENST00000497227 ZFP91Q96JP5 570 aaPredicted RBP8.4□□□□□ -1.06
CARMIL1-204ENST00000497227 RGL2O15211 777 aa8.39□□□□□ -1.07
CARMIL1-204ENST00000497227 L3MBTL3Q96JM7 780 aaPredicted RBP8.39□□□□□ -1.07
CARMIL1-204ENST00000497227 HS3ST6Q96QI5 342 aa8.39□□□□□ -1.07
CARMIL1-204ENST00000497227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.39□□□□□ -1.07
CARMIL1-204ENST00000497227 ATP1B4Q9UN42 357 aaPredicted RBP8.39□□□□□ -1.07
CARMIL1-204ENST00000497227 FER1L4A9Z1Z3 1794 aa8.39□□□□□ -1.07
CARMIL1-204ENST00000497227 TRAPPC8Q9Y2L5 1435 aa8.38□□□□□ -1.07
CARMIL1-204ENST00000497227 CFAP74Q9C0B2 1584 aa8.38□□□□□ -1.07
CARMIL1-204ENST00000497227 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
CARMIL1-204ENST00000497227 PREX1Q8TCU6 1659 aa8.37□□□□□ -1.07
CARMIL1-204ENST00000497227 NCKAP5LQ9HCH0 1330 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms