RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
RAB3GAP1-206ENST00000497080 GRXCR2A6NFK2 248 aa11.93□□□□□ -0.5
RAB3GAP1-206ENST00000497080 VPS9D1Q9Y2B5 631 aa11.93□□□□□ -0.5
RAB3GAP1-206ENST00000497080 NBR1Q14596 966 aa11.92□□□□□ -0.5
RAB3GAP1-206ENST00000497080 C6orf132Q5T0Z8 1188 aa11.91□□□□□ -0.5
RAB3GAP1-206ENST00000497080 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
RAB3GAP1-206ENST00000497080 HRO43593 1189 aa11.9□□□□□ -0.5
RAB3GAP1-206ENST00000497080 COL9A1P20849 921 aa11.9□□□□□ -0.5
RAB3GAP1-206ENST00000497080 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
RAB3GAP1-206ENST00000497080 SLC4A5Q9BY07 1137 aa11.89□□□□□ -0.51
RAB3GAP1-206ENST00000497080 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
RAB3GAP1-206ENST00000497080 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
RAB3GAP1-206ENST00000497080 MAP3K7O43318 606 aa11.87□□□□□ -0.51
RAB3GAP1-206ENST00000497080 STAC3Q96MF2 364 aa11.87□□□□□ -0.51
RAB3GAP1-206ENST00000497080 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
RAB3GAP1-206ENST00000497080 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
RAB3GAP1-206ENST00000497080 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
RAB3GAP1-206ENST00000497080 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
RAB3GAP1-206ENST00000497080 OSBPP22059 807 aa11.84□□□□□ -0.51
RAB3GAP1-206ENST00000497080 PROX2Q3B8N5 592 aa11.84□□□□□ -0.51
RAB3GAP1-206ENST00000497080 MLLT3P42568 568 aaPredicted RBP11.82□□□□□ -0.52
RAB3GAP1-206ENST00000497080 BHMG1C9JSJ3 638 aaPredicted RBP11.81□□□□□ -0.52
RAB3GAP1-206ENST00000497080 VSIG10Q8N0Z9 540 aa11.8□□□□□ -0.52
RAB3GAP1-206ENST00000497080 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
RAB3GAP1-206ENST00000497080 SEMA3EO15041 775 aa11.77□□□□□ -0.53
RAB3GAP1-206ENST00000497080 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.53
RAB3GAP1-206ENST00000497080 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
RAB3GAP1-206ENST00000497080 KCTD12Q96CX2 325 aaKnown RBP11.76□□□□□ -0.53
RAB3GAP1-206ENST00000497080 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
RAB3GAP1-206ENST00000497080 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
RAB3GAP1-206ENST00000497080 CDHR5Q9HBB8 845 aa11.74□□□□□ -0.53
RAB3GAP1-206ENST00000497080 GOLGA8CPA6NN73 597 aa11.73□□□□□ -0.53
RAB3GAP1-206ENST00000497080 ONECUT3O60422 494 aaPredicted RBP11.73□□□□□ -0.53
RAB3GAP1-206ENST00000497080 CERKQ8TCT0 537 aa11.71□□□□□ -0.53
RAB3GAP1-206ENST00000497080 CDCA7LQ96GN5 454 aa11.71□□□□□ -0.53
RAB3GAP1-206ENST00000497080 TSKSQ9UJT2 592 aa11.71□□□□□ -0.53
RAB3GAP1-206ENST00000497080 PRSS12P56730 875 aa11.7□□□□□ -0.54
RAB3GAP1-206ENST00000497080 PACS2Q86VP3 889 aa11.69□□□□□ -0.54
RAB3GAP1-206ENST00000497080 WNT2BQ93097 391 aa11.69□□□□□ -0.54
RAB3GAP1-206ENST00000497080 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
RAB3GAP1-206ENST00000497080 HCSTQ9UBK5 93 aa11.69□□□□□ -0.54
RAB3GAP1-206ENST00000497080 SEPT9Q9UHD8 586 aaPredicted RBP11.69□□□□□ -0.54
RAB3GAP1-206ENST00000497080 FAM198AQ9UFP1 575 aa11.68□□□□□ -0.54
RAB3GAP1-206ENST00000497080 TESPA1A2RU30 521 aaPredicted RBP11.66□□□□□ -0.54
RAB3GAP1-206ENST00000497080 PTPN5P54829 565 aa11.66□□□□□ -0.54
RAB3GAP1-206ENST00000497080 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
RAB3GAP1-206ENST00000497080 NUTM2FA1L443 756 aa11.64□□□□□ -0.55
RAB3GAP1-206ENST00000497080 THSD4Q6ZMP0 1018 aa11.64□□□□□ -0.55
RAB3GAP1-206ENST00000497080 C3orf80F5H4A9 247 aa11.63□□□□□ -0.55
RAB3GAP1-206ENST00000497080 SMAPO00193 183 aa11.63□□□□□ -0.55
RAB3GAP1-206ENST00000497080 ZFRQ96KR1 1074 aaKnown RBP11.63□□□□□ -0.55
RAB3GAP1-206ENST00000497080 FAM98CQ17RN3 349 aaKnown RBP11.62□□□□□ -0.55
RAB3GAP1-206ENST00000497080 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
RAB3GAP1-206ENST00000497080 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
RAB3GAP1-206ENST00000497080 RBM26Q5T8P6 1007 aaKnown RBP11.6□□□□□ -0.55
RAB3GAP1-206ENST00000497080 PADI6Q6TGC4 694 aa11.6□□□□□ -0.55
RAB3GAP1-206ENST00000497080 TATDN2Q93075 761 aa11.6□□□□□ -0.55
RAB3GAP1-206ENST00000497080 PTGDRQ13258 359 aa11.59□□□□□ -0.55
RAB3GAP1-206ENST00000497080 TTC13Q8NBP0 860 aa11.59□□□□□ -0.55
RAB3GAP1-206ENST00000497080 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
RAB3GAP1-206ENST00000497080 PNMA3Q9UL41 463 aa11.59□□□□□ -0.55
RAB3GAP1-206ENST00000497080 BCAMP50895 628 aa11.58□□□□□ -0.56
RAB3GAP1-206ENST00000497080 NUDT18Q6ZVK8 323 aa11.58□□□□□ -0.56
RAB3GAP1-206ENST00000497080 NBPF26B4DH59 902 aa11.57□□□□□ -0.56
RAB3GAP1-206ENST00000497080 SOWAHBA6NEL2 793 aa11.56□□□□□ -0.56
RAB3GAP1-206ENST00000497080 FCHSD2O94868 740 aa11.54□□□□□ -0.56
RAB3GAP1-206ENST00000497080 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.53□□□□□ -0.56
RAB3GAP1-206ENST00000497080 SAMD7Q7Z3H4 446 aa11.52□□□□□ -0.57
RAB3GAP1-206ENST00000497080 LRCH3Q96II8 777 aa11.52□□□□□ -0.57
RAB3GAP1-206ENST00000497080 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
RAB3GAP1-206ENST00000497080 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
RAB3GAP1-206ENST00000497080 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
RAB3GAP1-206ENST00000497080 EYA1Q99502 592 aa11.49□□□□□ -0.57
RAB3GAP1-206ENST00000497080 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
RAB3GAP1-206ENST00000497080 HPS5Q9UPZ3 1129 aa11.48□□□□□ -0.57
RAB3GAP1-206ENST00000497080 TSR3Q9UJK0 312 aaKnown RBP11.47□□□□□ -0.57
RAB3GAP1-206ENST00000497080 HIC1Q14526 733 aa11.46□□□□□ -0.57
RAB3GAP1-206ENST00000497080 ADGRG1Q9Y653 693 aa11.46□□□□□ -0.57
RAB3GAP1-206ENST00000497080 PPP4CP60510 307 aa11.45□□□□□ -0.58
RAB3GAP1-206ENST00000497080 TULP1O00294 542 aaPredicted RBP11.44□□□□□ -0.58
RAB3GAP1-206ENST00000497080 FECHP22830 423 aa11.44□□□□□ -0.58
RAB3GAP1-206ENST00000497080 RBM46Q8TBY0 533 aaKnown RBP11.44□□□□□ -0.58
RAB3GAP1-206ENST00000497080 GNPATO15228 680 aa11.43□□□□□ -0.58
RAB3GAP1-206ENST00000497080 GPR37O15354 613 aa11.43□□□□□ -0.58
RAB3GAP1-206ENST00000497080 SWT1Q5T5J6 900 aaKnown RBP11.43□□□□□ -0.58
RAB3GAP1-206ENST00000497080 GPIHBP1Q8IV16 184 aa11.43□□□□□ -0.58
RAB3GAP1-206ENST00000497080 RNF40O75150 1001 aa11.42□□□□□ -0.58
RAB3GAP1-206ENST00000497080 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
RAB3GAP1-206ENST00000497080 RCCD1A6NED2 376 aa11.39□□□□□ -0.59
RAB3GAP1-206ENST00000497080 OATP04181 439 aa11.38□□□□□ -0.59
RAB3GAP1-206ENST00000497080 DNAJB2P25686 324 aa11.38□□□□□ -0.59
RAB3GAP1-206ENST00000497080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.36□□□□□ -0.59
RAB3GAP1-206ENST00000497080 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
RAB3GAP1-206ENST00000497080 PXYLP1Q8TE99 480 aa11.36□□□□□ -0.59
RAB3GAP1-206ENST00000497080 TMEM134Q9H6X4 195 aa11.35□□□□□ -0.59
RAB3GAP1-206ENST00000497080 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
RAB3GAP1-206ENST00000497080 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
RAB3GAP1-206ENST00000497080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.32□□□□□ -0.6
RAB3GAP1-206ENST00000497080 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
RAB3GAP1-206ENST00000497080 APLP1P51693 650 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms