RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 ABCA5Q8WWZ7 1642 aa8.6□□□□□ -1.03
SGIP1-214ENST00000497055 MADDQ8WXG6 1647 aa8.59□□□□□ -1.03
SGIP1-214ENST00000497055 MAP3K4Q9Y6R4 1608 aa8.59□□□□□ -1.03
SGIP1-214ENST00000497055 G3V3G9 751 aa8.59□□□□□ -1.03
SGIP1-214ENST00000497055 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
SGIP1-214ENST00000497055 TMEM121BQ9BXQ6 578 aaPredicted RBP8.58□□□□□ -1.04
SGIP1-214ENST00000497055 FHAD1B1AJZ9 1412 aa8.57□□□□□ -1.04
SGIP1-214ENST00000497055 POTEB2H3BUK9 544 aa8.57□□□□□ -1.04
SGIP1-214ENST00000497055 EPRSP07814 1512 aaKnown RBP8.57□□□□□ -1.04
SGIP1-214ENST00000497055 CUX1P39880 1505 aa8.56□□□□□ -1.04
SGIP1-214ENST00000497055 ABCC2Q92887 1545 aa8.56□□□□□ -1.04
SGIP1-214ENST00000497055 UBAP1LF5GYI3 381 aa8.56□□□□□ -1.04
SGIP1-214ENST00000497055 MICALL2Q8IY33 904 aa8.56□□□□□ -1.04
SGIP1-214ENST00000497055 KIAA0586Q9BVV6 1533 aa8.55□□□□□ -1.04
SGIP1-214ENST00000497055 ABCA10Q8WWZ4 1543 aa8.54□□□□□ -1.04
SGIP1-214ENST00000497055 RIMS1Q86UR5 1692 aaKnown RBP8.54□□□□□ -1.04
SGIP1-214ENST00000497055 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
SGIP1-214ENST00000497055 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
SGIP1-214ENST00000497055 TSHZ2Q9NRE2 1034 aa8.54□□□□□ -1.04
SGIP1-214ENST00000497055 YEATS2Q9ULM3 1422 aa8.54□□□□□ -1.04
SGIP1-214ENST00000497055 BCORL1Q5H9F3 1711 aa8.53□□□□□ -1.04
SGIP1-214ENST00000497055 IQSEC2Q5JU85 1478 aa8.52□□□□□ -1.05
SGIP1-214ENST00000497055 MAMSTRQ6ZN01 415 aa8.52□□□□□ -1.05
SGIP1-214ENST00000497055 PTPRGP23470 1445 aa8.52□□□□□ -1.05
SGIP1-214ENST00000497055 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
SGIP1-214ENST00000497055 CUL7Q14999 1698 aa8.51□□□□□ -1.05
SGIP1-214ENST00000497055 HSPA1LP34931 641 aa8.51□□□□□ -1.05
SGIP1-214ENST00000497055 LHX8Q68G74 356 aa8.51□□□□□ -1.05
SGIP1-214ENST00000497055 C3orf67Q6ZVT6 689 aa8.5□□□□□ -1.05
SGIP1-214ENST00000497055 LTBP4Q8N2S1 1624 aa8.5□□□□□ -1.05
SGIP1-214ENST00000497055 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
SGIP1-214ENST00000497055 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
SGIP1-214ENST00000497055 SCUBE2Q9NQ36 999 aa8.48□□□□□ -1.05
SGIP1-214ENST00000497055 STRCQ7RTU9 1775 aa8.48□□□□□ -1.05
SGIP1-214ENST00000497055 CD109Q6YHK3 1445 aa8.46□□□□□ -1.05
SGIP1-214ENST00000497055 PDE4AP27815 886 aa8.46□□□□□ -1.06
SGIP1-214ENST00000497055 CFAP43Q8NDM7 1665 aa8.46□□□□□ -1.06
SGIP1-214ENST00000497055 PTPRTO14522 1441 aa8.46□□□□□ -1.06
SGIP1-214ENST00000497055 MAGI3Q5TCQ9 1506 aa8.45□□□□□ -1.06
SGIP1-214ENST00000497055 TMC2Q8TDI7 906 aa8.45□□□□□ -1.06
SGIP1-214ENST00000497055 PIP4K2BP78356 416 aa8.44□□□□□ -1.06
SGIP1-214ENST00000497055 TMEM92Q6UXU6 159 aa8.44□□□□□ -1.06
SGIP1-214ENST00000497055 VSIG10Q8N0Z9 540 aa8.44□□□□□ -1.06
SGIP1-214ENST00000497055 CRISPLD2Q9H0B8 497 aa8.44□□□□□ -1.06
SGIP1-214ENST00000497055 GPHNQ9NQX3 736 aaPredicted RBP8.44□□□□□ -1.06
SGIP1-214ENST00000497055 NCKAP5LQ9HCH0 1330 aa8.44□□□□□ -1.06
SGIP1-214ENST00000497055 SLC24A1O60721 1099 aa8.43□□□□□ -1.06
SGIP1-214ENST00000497055 OTUD5Q96G74 571 aa8.43□□□□□ -1.06
SGIP1-214ENST00000497055 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
SGIP1-214ENST00000497055 KIF3CO14782 793 aa8.42□□□□□ -1.06
SGIP1-214ENST00000497055 RAPGEF3O95398 923 aa8.42□□□□□ -1.06
SGIP1-214ENST00000497055 SLAIN1Q8ND83 568 aa8.42□□□□□ -1.06
SGIP1-214ENST00000497055 LARP6Q9BRS8 491 aaKnown RBP8.42□□□□□ -1.06
SGIP1-214ENST00000497055 ARAP3Q8WWN8 1544 aa8.41□□□□□ -1.06
SGIP1-214ENST00000497055 UHRF1BP1LA0JNW5 1464 aa8.41□□□□□ -1.06
SGIP1-214ENST00000497055 UACAQ9BZF9 1416 aa8.41□□□□□ -1.06
SGIP1-214ENST00000497055 TNIKQ9UKE5 1360 aa8.41□□□□□ -1.06
SGIP1-214ENST00000497055 KCNH8Q96L42 1107 aa8.41□□□□□ -1.06
SGIP1-214ENST00000497055 ERICH3Q5RHP9 1530 aa8.4□□□□□ -1.06
SGIP1-214ENST00000497055 WDR7Q9Y4E6 1490 aa8.4□□□□□ -1.06
SGIP1-214ENST00000497055 RGS17Q9UGC6 210 aaPredicted RBP8.4□□□□□ -1.06
SGIP1-214ENST00000497055 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
SGIP1-214ENST00000497055 PREX1Q8TCU6 1659 aa8.4□□□□□ -1.07
SGIP1-214ENST00000497055 KDM5BQ9UGL1 1544 aa8.39□□□□□ -1.07
SGIP1-214ENST00000497055 MLECQ14165 292 aa8.39□□□□□ -1.07
SGIP1-214ENST00000497055 MFSD10Q14728 455 aa8.39□□□□□ -1.07
SGIP1-214ENST00000497055 DDX27Q96GQ7 796 aaKnown RBP8.39□□□□□ -1.07
SGIP1-214ENST00000497055 WDR70Q9NW82 654 aa8.39□□□□□ -1.07
SGIP1-214ENST00000497055 ZCCHC11Q5TAX3 1644 aaKnown RBP8.39□□□□□ -1.07
SGIP1-214ENST00000497055 FOXK1P85037 733 aa8.38□□□□□ -1.07
SGIP1-214ENST00000497055 ZNF335Q9H4Z2 1342 aaPredicted RBP8.37□□□□□ -1.07
SGIP1-214ENST00000497055 DSG2Q14126 1118 aa8.37□□□□□ -1.07
SGIP1-214ENST00000497055 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
SGIP1-214ENST00000497055 POGZQ7Z3K3 1410 aa8.37□□□□□ -1.07
SGIP1-214ENST00000497055 CEBPAP49715 358 aaPredicted RBP8.36□□□□□ -1.07
SGIP1-214ENST00000497055 PPP1R15BQ5SWA1 713 aa8.36□□□□□ -1.07
SGIP1-214ENST00000497055 WRNQ14191 1432 aaPredicted RBP eCLIP8.36□□□□□ -1.07
SGIP1-214ENST00000497055 CARMIL2Q6F5E8 1435 aa8.36□□□□□ -1.07
SGIP1-214ENST00000497055 PLPP6Q8IY26 295 aa8.35□□□□□ -1.07
SGIP1-214ENST00000497055 POTEAQ6S8J7 498 aa8.34□□□□□ -1.07
SGIP1-214ENST00000497055 SRCAPQ6ZRS2 3230 aa8.34□□□□□ -1.07
SGIP1-214ENST00000497055 SETD1AO15047 1707 aaKnown RBP8.33□□□□□ -1.08
SGIP1-214ENST00000497055 TOM1O60784 492 aa8.33□□□□□ -1.08
SGIP1-214ENST00000497055 IFFO2Q5TF58 517 aa8.33□□□□□ -1.08
SGIP1-214ENST00000497055 TTC37Q6PGP7 1564 aa8.33□□□□□ -1.08
SGIP1-214ENST00000497055 FER1L4A9Z1Z3 1794 aa8.32□□□□□ -1.08
SGIP1-214ENST00000497055 FANCAO15360 1455 aa8.32□□□□□ -1.08
SGIP1-214ENST00000497055 ARHGEF40Q8TER5 1519 aa8.31□□□□□ -1.08
SGIP1-214ENST00000497055 E2F4Q16254 413 aa8.31□□□□□ -1.08
SGIP1-214ENST00000497055 SNPHO15079 494 aa8.3□□□□□ -1.08
SGIP1-214ENST00000497055 UPF1Q92900 1129 aaKnown RBP eCLIP8.3□□□□□ -1.08
SGIP1-214ENST00000497055 CAMK2BQ13554 666 aa8.29□□□□□ -1.08
SGIP1-214ENST00000497055 PHLDB1Q86UU1 1377 aa8.29□□□□□ -1.08
SGIP1-214ENST00000497055 FRMPD1Q5SYB0 1578 aa8.29□□□□□ -1.08
SGIP1-214ENST00000497055 NCOA1Q15788 1441 aa8.29□□□□□ -1.08
SGIP1-214ENST00000497055 SLC34A2O95436 690 aa8.28□□□□□ -1.08
SGIP1-214ENST00000497055 DOK7Q18PE1 504 aa8.28□□□□□ -1.08
SGIP1-214ENST00000497055 HOXB3P14651 431 aaPredicted RBP8.27□□□□□ -1.09
SGIP1-214ENST00000497055 AKNAQ7Z591 1439 aa8.27□□□□□ -1.09
SGIP1-214ENST00000497055 SIGLEC1Q9BZZ2 1709 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms