RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 POTEBQ6S5H4 581 aa7.24□□□□□ -1.25
EXOSC3-208ENST00000496910 POTEEQ6S8J3 1075 aa7.24□□□□□ -1.25
EXOSC3-208ENST00000496910 RBM33Q96EV2 1170 aaKnown RBP7.24□□□□□ -1.25
EXOSC3-208ENST00000496910 NUTM2FA1L443 756 aa7.23□□□□□ -1.25
EXOSC3-208ENST00000496910 MAP3K7O43318 606 aa7.23□□□□□ -1.25
EXOSC3-208ENST00000496910 C6orf132Q5T0Z8 1188 aa7.23□□□□□ -1.25
EXOSC3-208ENST00000496910 FBXO41Q8TF61 875 aa7.23□□□□□ -1.25
EXOSC3-208ENST00000496910 BCL2L12Q9HB09 334 aa7.23□□□□□ -1.25
EXOSC3-208ENST00000496910 PSDA5PKW4 1024 aaPredicted RBP7.22□□□□□ -1.25
EXOSC3-208ENST00000496910 FCHSD2O94868 740 aa7.22□□□□□ -1.25
EXOSC3-208ENST00000496910 SLC24A3Q9HC58 644 aa7.22□□□□□ -1.25
EXOSC3-208ENST00000496910 GNPATO15228 680 aa7.21□□□□□ -1.26
EXOSC3-208ENST00000496910 COL9A1P20849 921 aa7.21□□□□□ -1.26
EXOSC3-208ENST00000496910 HIC1Q14526 733 aa7.21□□□□□ -1.26
EXOSC3-208ENST00000496910 PPP4R3BQ5MIZ7 849 aa7.21□□□□□ -1.26
EXOSC3-208ENST00000496910 TTC13Q8NBP0 860 aa7.21□□□□□ -1.26
EXOSC3-208ENST00000496910 MARVELD3Q96A59 401 aa7.21□□□□□ -1.26
EXOSC3-208ENST00000496910 MAP2K5Q13163 448 aa7.19□□□□□ -1.26
EXOSC3-208ENST00000496910 FAM198AQ9UFP1 575 aa7.19□□□□□ -1.26
EXOSC3-208ENST00000496910 CECR2Q9BXF3 1484 aa7.18□□□□□ -1.26
EXOSC3-208ENST00000496910 EMP3P54852 163 aa7.18□□□□□ -1.26
EXOSC3-208ENST00000496910 VARS2Q5ST30 1063 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-208ENST00000496910 FAM163AQ96GL9 167 aaPredicted RBP7.18□□□□□ -1.26
EXOSC3-208ENST00000496910 RBM27Q9P2N5 1060 aaKnown RBP7.17□□□□□ -1.26
EXOSC3-208ENST00000496910 PPP1R3GB7ZBB8 358 aa7.16□□□□□ -1.26
EXOSC3-208ENST00000496910 C3orf80F5H4A9 247 aa7.16□□□□□ -1.26
EXOSC3-208ENST00000496910 IRF6O14896 467 aa7.16□□□□□ -1.26
EXOSC3-208ENST00000496910 PADI6Q6TGC4 694 aa7.16□□□□□ -1.26
EXOSC3-208ENST00000496910 CERKQ8TCT0 537 aa7.16□□□□□ -1.26
EXOSC3-208ENST00000496910 CCDC102AQ96A19 550 aa7.16□□□□□ -1.26
EXOSC3-208ENST00000496910 DAXXQ9UER7 740 aaPredicted RBP7.16□□□□□ -1.26
EXOSC3-208ENST00000496910 ERBB3P21860 1342 aa7.16□□□□□ -1.26
EXOSC3-208ENST00000496910 MINK1Q8N4C8 1332 aaPredicted RBP7.16□□□□□ -1.26
EXOSC3-208ENST00000496910 AK7Q96M32 723 aa7.15□□□□□ -1.26
EXOSC3-208ENST00000496910 HS3ST6Q96QI5 342 aa7.15□□□□□ -1.26
EXOSC3-208ENST00000496910 DISP3Q9P2K9 1392 aa7.15□□□□□ -1.26
EXOSC3-208ENST00000496910 FAM205CA6NFA0 338 aa7.14□□□□□ -1.27
EXOSC3-208ENST00000496910 TRIM66O15016 1216 aa7.14□□□□□ -1.27
EXOSC3-208ENST00000496910 PTPREP23469 700 aa7.14□□□□□ -1.27
EXOSC3-208ENST00000496910 PSEN2P49810 448 aa7.14□□□□□ -1.27
EXOSC3-208ENST00000496910 BRPF1P55201 1214 aaPredicted RBP7.14□□□□□ -1.27
EXOSC3-208ENST00000496910 PRSS12P56730 875 aa7.14□□□□□ -1.27
EXOSC3-208ENST00000496910 ZNF687Q8N1G0 1237 aa7.14□□□□□ -1.27
EXOSC3-208ENST00000496910 PHOX2BQ99453 314 aa7.14□□□□□ -1.27
EXOSC3-208ENST00000496910 TSKSQ9UJT2 592 aa7.14□□□□□ -1.27
EXOSC3-208ENST00000496910 DMRTA1Q5VZB9 504 aa7.13□□□□□ -1.27
EXOSC3-208ENST00000496910 CDCA7LQ96GN5 454 aa7.13□□□□□ -1.27
EXOSC3-208ENST00000496910 KCNK17Q96T54 332 aa7.13□□□□□ -1.27
EXOSC3-208ENST00000496910 ZBED2Q9BTP6 218 aa7.13□□□□□ -1.27
EXOSC3-208ENST00000496910 ADGRG1Q9Y653 693 aa7.13□□□□□ -1.27
EXOSC3-208ENST00000496910 AMHR2Q16671 573 aa7.12□□□□□ -1.27
EXOSC3-208ENST00000496910 FAM161AQ3B820 660 aa7.12□□□□□ -1.27
EXOSC3-208ENST00000496910 AXIN2Q9Y2T1 843 aa7.12□□□□□ -1.27
EXOSC3-208ENST00000496910 ARHGAP33O14559 1287 aa7.11□□□□□ -1.27
EXOSC3-208ENST00000496910 PROX2Q3B8N5 592 aa7.11□□□□□ -1.27
EXOSC3-208ENST00000496910 TMUB1Q9BVT8 246 aa7.11□□□□□ -1.27
EXOSC3-208ENST00000496910 SLC4A5Q9BY07 1137 aa7.11□□□□□ -1.27
EXOSC3-208ENST00000496910 TRIM6-TRIM34B2RNG4 842 aa7.1□□□□□ -1.27
EXOSC3-208ENST00000496910 PBX2P40425 430 aa7.1□□□□□ -1.27
EXOSC3-208ENST00000496910 KRI1Q8N9T8 703 aaKnown RBP7.1□□□□□ -1.27
EXOSC3-208ENST00000496910 PDE4DQ08499 809 aa7.09□□□□□ -1.27
EXOSC3-208ENST00000496910 METTL3Q86U44 580 aaKnown RBP7.09□□□□□ -1.27
EXOSC3-208ENST00000496910 PXYLP1Q8TE99 480 aa7.09□□□□□ -1.27
EXOSC3-208ENST00000496910 EYA1Q99502 592 aa7.09□□□□□ -1.27
EXOSC3-208ENST00000496910 ONECUT3O60422 494 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-208ENST00000496910 REPIN1Q9BWE0 567 aaKnown RBP7.08□□□□□ -1.28
EXOSC3-208ENST00000496910 PARP9Q8IXQ6 854 aa7.07□□□□□ -1.28
EXOSC3-208ENST00000496910 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
EXOSC3-208ENST00000496910 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
EXOSC3-208ENST00000496910 GPBP1L1Q9HC44 474 aaPredicted RBP7.07□□□□□ -1.28
EXOSC3-208ENST00000496910 TIMELESSQ9UNS1 1208 aa7.06□□□□□ -1.28
EXOSC3-208ENST00000496910 VPS9D1Q9Y2B5 631 aa7.06□□□□□ -1.28
EXOSC3-208ENST00000496910 BHMG1C9JSJ3 638 aaPredicted RBP7.05□□□□□ -1.28
EXOSC3-208ENST00000496910 NLRP7Q8WX94 980 aa7.05□□□□□ -1.28
EXOSC3-208ENST00000496910 OATP04181 439 aa7.04□□□□□ -1.28
EXOSC3-208ENST00000496910 NUDT18Q6ZVK8 323 aa7.04□□□□□ -1.28
EXOSC3-208ENST00000496910 TATDN2Q93075 761 aa7.04□□□□□ -1.28
EXOSC3-208ENST00000496910 KDM4CQ9H3R0 1056 aa7.04□□□□□ -1.28
EXOSC3-208ENST00000496910 KIAA1468Q9P260 1216 aa7.04□□□□□ -1.28
EXOSC3-208ENST00000496910 RABGEF1Q9UJ41 708 aa7.04□□□□□ -1.28
EXOSC3-208ENST00000496910 TK2O00142 265 aa7.03□□□□□ -1.28
EXOSC3-208ENST00000496910 HRO43593 1189 aa7.03□□□□□ -1.28
EXOSC3-208ENST00000496910 LSM11P83369 360 aaKnown RBP eCLIP7.03□□□□□ -1.28
EXOSC3-208ENST00000496910 NEUROD2Q15784 382 aa7.03□□□□□ -1.28
EXOSC3-208ENST00000496910 SMAPO00193 183 aa7.02□□□□□ -1.29
EXOSC3-208ENST00000496910 RCCD1A6NED2 376 aa7.01□□□□□ -1.29
EXOSC3-208ENST00000496910 NBPF26B4DH59 902 aa7.01□□□□□ -1.29
EXOSC3-208ENST00000496910 MS4A1P11836 297 aa7.01□□□□□ -1.29
EXOSC3-208ENST00000496910 ADGRD1Q6QNK2 874 aa7.01□□□□□ -1.29
EXOSC3-208ENST00000496910 PACS2Q86VP3 889 aa7.01□□□□□ -1.29
EXOSC3-208ENST00000496910 RBM46Q8TBY0 533 aaKnown RBP7.01□□□□□ -1.29
EXOSC3-208ENST00000496910 KCNH8Q96L42 1107 aa7.01□□□□□ -1.29
EXOSC3-208ENST00000496910 PNMA3Q9UL41 463 aa7.01□□□□□ -1.29
EXOSC3-208ENST00000496910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7□□□□□ -1.29
EXOSC3-208ENST00000496910 PLEKHG3A1L390 1219 aa7□□□□□ -1.29
EXOSC3-208ENST00000496910 MDM2Q00987 491 aaPredicted RBP7□□□□□ -1.29
EXOSC3-208ENST00000496910 POTEGQ6S5H5 508 aa7□□□□□ -1.29
EXOSC3-208ENST00000496910 GIGYF2Q6Y7W6 1299 aaKnown RBP7□□□□□ -1.29
EXOSC3-208ENST00000496910 TMEM134Q9H6X4 195 aa7□□□□□ -1.29
EXOSC3-208ENST00000496910 CC2D2AQ9P2K1 1620 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms