RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 NCKAP5LQ9HCH0 1330 aa9.39□□□□□ -0.91
HMGCL-206ENST00000496907 TOM1O60784 492 aa9.39□□□□□ -0.91
HMGCL-206ENST00000496907 ESF1Q9H501 851 aaKnown RBP9.39□□□□□ -0.91
HMGCL-206ENST00000496907 CDK13Q14004 1512 aaKnown RBP9.39□□□□□ -0.91
HMGCL-206ENST00000496907 NCOA1Q15788 1441 aa9.39□□□□□ -0.91
HMGCL-206ENST00000496907 PRKAR2AP13861 404 aaKnown RBP9.38□□□□□ -0.91
HMGCL-206ENST00000496907 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
HMGCL-206ENST00000496907 PLCH2O75038 1416 aa9.38□□□□□ -0.91
HMGCL-206ENST00000496907 CCNB3Q8WWL7 1395 aa9.37□□□□□ -0.91
HMGCL-206ENST00000496907 ZNF518AQ6AHZ1 1483 aa9.36□□□□□ -0.91
HMGCL-206ENST00000496907 LRRC9Q6ZRR7 1453 aa9.36□□□□□ -0.91
HMGCL-206ENST00000496907 UPF1Q92900 1129 aaKnown RBP eCLIP9.36□□□□□ -0.91
HMGCL-206ENST00000496907 CFDP1Q9UEE9 299 aaPredicted RBP9.36□□□□□ -0.91
HMGCL-206ENST00000496907 DIP2CQ9Y2E4 1556 aa9.36□□□□□ -0.91
HMGCL-206ENST00000496907 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
HMGCL-206ENST00000496907 EHBP1L1Q8N3D4 1523 aa9.35□□□□□ -0.91
HMGCL-206ENST00000496907 CAMSAP1Q5T5Y3 1602 aa9.34□□□□□ -0.91
HMGCL-206ENST00000496907 ABCA6Q8N139 1617 aa9.34□□□□□ -0.91
HMGCL-206ENST00000496907 TIAM1Q13009 1591 aa9.34□□□□□ -0.91
HMGCL-206ENST00000496907 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
HMGCL-206ENST00000496907 ARHGAP5Q13017 1502 aa9.34□□□□□ -0.91
HMGCL-206ENST00000496907 KIF14Q15058 1648 aa9.34□□□□□ -0.91
HMGCL-206ENST00000496907 KDM5CP41229 1560 aa9.33□□□□□ -0.92
HMGCL-206ENST00000496907 TRAPPC8Q9Y2L5 1435 aa9.33□□□□□ -0.92
HMGCL-206ENST00000496907 AFAP1Q8N556 730 aa9.33□□□□□ -0.92
HMGCL-206ENST00000496907 SUPT6HQ7KZ85 1726 aaKnown RBP9.33□□□□□ -0.92
HMGCL-206ENST00000496907 REREQ9P2R6 1566 aa9.33□□□□□ -0.92
HMGCL-206ENST00000496907 OTUD5Q96G74 571 aa9.32□□□□□ -0.92
HMGCL-206ENST00000496907 PLEKHH2Q8IVE3 1493 aa9.31□□□□□ -0.92
HMGCL-206ENST00000496907 MIA2Q96PC5 1412 aa9.31□□□□□ -0.92
HMGCL-206ENST00000496907 NCOA2Q15596 1464 aa9.3□□□□□ -0.92
HMGCL-206ENST00000496907 AGLP35573 1532 aa9.3□□□□□ -0.92
HMGCL-206ENST00000496907 GPATCH8Q9UKJ3 1502 aaKnown RBP9.3□□□□□ -0.92
HMGCL-206ENST00000496907 CNTLNQ9NXG0 1405 aa9.3□□□□□ -0.92
HMGCL-206ENST00000496907 KIAA1107Q9UPP5 1409 aa9.3□□□□□ -0.92
HMGCL-206ENST00000496907 TSPY4P0CV99 314 aa9.29□□□□□ -0.92
HMGCL-206ENST00000496907 TSPY10P0CW01 314 aa9.29□□□□□ -0.92
HMGCL-206ENST00000496907 ZNF777Q9ULD5 760 aaPredicted RBP9.29□□□□□ -0.92
HMGCL-206ENST00000496907 MYO3AQ8NEV4 1616 aa9.28□□□□□ -0.92
HMGCL-206ENST00000496907 IFFO2Q5TF58 517 aa9.28□□□□□ -0.92
HMGCL-206ENST00000496907 MROH2AA6NES4 1674 aa9.28□□□□□ -0.92
HMGCL-206ENST00000496907 NPATQ14207 1427 aa9.28□□□□□ -0.92
HMGCL-206ENST00000496907 MLH3Q9UHC1 1453 aa9.28□□□□□ -0.92
HMGCL-206ENST00000496907 ALKQ9UM73 1620 aa9.27□□□□□ -0.92
HMGCL-206ENST00000496907 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
HMGCL-206ENST00000496907 MYOM3Q5VTT5 1437 aa9.27□□□□□ -0.93
HMGCL-206ENST00000496907 CDC42BPBQ9Y5S2 1711 aa9.27□□□□□ -0.93
HMGCL-206ENST00000496907 ZNF142P52746 1687 aaPredicted RBP9.26□□□□□ -0.93
HMGCL-206ENST00000496907 ITSN2Q9NZM3 1697 aa9.26□□□□□ -0.93
HMGCL-206ENST00000496907 CLTCQ00610 1675 aaKnown RBP9.26□□□□□ -0.93
HMGCL-206ENST00000496907 ABCC1P33527 1531 aa9.26□□□□□ -0.93
HMGCL-206ENST00000496907 LRRIQ1Q96JM4 1722 aa9.25□□□□□ -0.93
HMGCL-206ENST00000496907 CEP170BQ9Y4F5 1589 aaPredicted RBP9.25□□□□□ -0.93
HMGCL-206ENST00000496907 KIDINS220Q9ULH0 1771 aa9.25□□□□□ -0.93
HMGCL-206ENST00000496907 PREX2Q70Z35 1606 aa9.25□□□□□ -0.93
HMGCL-206ENST00000496907 PKD2Q13563 968 aa9.25□□□□□ -0.93
HMGCL-206ENST00000496907 PLA2R1Q13018 1463 aa9.25□□□□□ -0.93
HMGCL-206ENST00000496907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.24□□□□□ -0.93
HMGCL-206ENST00000496907 MYCNP04198 464 aaPredicted RBP9.24□□□□□ -0.93
HMGCL-206ENST00000496907 HNRNPMP52272 730 aaKnown RBP eCLIP9.24□□□□□ -0.93
HMGCL-206ENST00000496907 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
HMGCL-206ENST00000496907 ZMYM3Q14202 1370 aa9.24□□□□□ -0.93
HMGCL-206ENST00000496907 PTPRKQ15262 1439 aa9.23□□□□□ -0.93
HMGCL-206ENST00000496907 TCOF1Q13428 1488 aaKnown RBP9.23□□□□□ -0.93
HMGCL-206ENST00000496907 SPAG9O60271 1321 aaKnown RBP9.23□□□□□ -0.93
HMGCL-206ENST00000496907 POLR1AO95602 1720 aaPredicted RBP9.22□□□□□ -0.93
HMGCL-206ENST00000496907 RTEL1-TNFRSF6BF6WH68 1400 aa9.22□□□□□ -0.93
HMGCL-206ENST00000496907 FGD6Q6ZV73 1430 aa9.22□□□□□ -0.93
HMGCL-206ENST00000496907 FAM50AQ14320 339 aaKnown RBP9.21□□□□□ -0.94
HMGCL-206ENST00000496907 ACIN1Q9UKV3 1341 aaKnown RBP9.21□□□□□ -0.94
HMGCL-206ENST00000496907 CPS1P31327 1500 aa9.21□□□□□ -0.94
HMGCL-206ENST00000496907 ZNF644Q9H582 1327 aaPredicted RBP9.2□□□□□ -0.94
HMGCL-206ENST00000496907 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
HMGCL-206ENST00000496907 CDC42BPAQ5VT25 1732 aa9.19□□□□□ -0.94
HMGCL-206ENST00000496907 PPARGC1BQ86YN6 1023 aaKnown RBP9.19□□□□□ -0.94
HMGCL-206ENST00000496907 RBM33Q96EV2 1170 aaKnown RBP9.19□□□□□ -0.94
HMGCL-206ENST00000496907 DNMT1P26358 1616 aaKnown RBP9.18□□□□□ -0.94
HMGCL-206ENST00000496907 GGT6Q6P531 493 aa9.18□□□□□ -0.94
HMGCL-206ENST00000496907 SYCP2Q9BX26 1530 aa9.18□□□□□ -0.94
HMGCL-206ENST00000496907 MBD5Q9P267 1494 aa9.18□□□□□ -0.94
HMGCL-206ENST00000496907 SHANK2Q9UPX8 1470 aa9.18□□□□□ -0.94
HMGCL-206ENST00000496907 SETBP1Q9Y6X0 1596 aa9.17□□□□□ -0.94
HMGCL-206ENST00000496907 ATP7AQ04656 1500 aa9.17□□□□□ -0.94
HMGCL-206ENST00000496907 A2ML1A8K2U0 1454 aa9.17□□□□□ -0.94
HMGCL-206ENST00000496907 CAMSAP2Q08AD1 1489 aa9.17□□□□□ -0.94
HMGCL-206ENST00000496907 CCDC141Q6ZP82 1450 aa9.17□□□□□ -0.94
HMGCL-206ENST00000496907 POTEB2H3BUK9 544 aa9.17□□□□□ -0.94
HMGCL-206ENST00000496907 PLXNC1O60486 1568 aa9.16□□□□□ -0.94
HMGCL-206ENST00000496907 NEURL4Q96JN8 1562 aa9.16□□□□□ -0.94
HMGCL-206ENST00000496907 RRBP1Q9P2E9 1410 aaKnown RBP9.16□□□□□ -0.94
HMGCL-206ENST00000496907 ARHGEF5Q12774 1597 aa9.16□□□□□ -0.94
HMGCL-206ENST00000496907 A2MP01023 1474 aa9.15□□□□□ -0.94
HMGCL-206ENST00000496907 ANKRD30AQ9BXX3 1397 aa9.15□□□□□ -0.94
HMGCL-206ENST00000496907 INO80Q9ULG1 1556 aaPredicted RBP9.15□□□□□ -0.95
HMGCL-206ENST00000496907 ZRANB1Q9UGI0 708 aa9.14□□□□□ -0.95
HMGCL-206ENST00000496907 ATF5Q9Y2D1 282 aaPredicted RBP9.14□□□□□ -0.95
HMGCL-206ENST00000496907 ABCC5O15440 1437 aa9.14□□□□□ -0.95
HMGCL-206ENST00000496907 ADGBQ8N7X0 1667 aa9.13□□□□□ -0.95
HMGCL-206ENST00000496907 DHX29Q7Z478 1369 aaKnown RBP9.13□□□□□ -0.95
HMGCL-206ENST00000496907 PTPN23Q9H3S7 1636 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms