RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.4
RPGR-210ENST00000494841 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
RPGR-210ENST00000494841 SEMA3EO15041 775 aa12.55□□□□□ -0.4
RPGR-210ENST00000494841 SNPHO15079 494 aa12.54□□□□□ -0.4
RPGR-210ENST00000494841 TBC1D12O60347 775 aa12.54□□□□□ -0.4
RPGR-210ENST00000494841 ABCA10Q8WWZ4 1543 aa12.53□□□□□ -0.4
RPGR-210ENST00000494841 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
RPGR-210ENST00000494841 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
RPGR-210ENST00000494841 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
RPGR-210ENST00000494841 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
RPGR-210ENST00000494841 EVI5O60447 810 aa12.51□□□□□ -0.41
RPGR-210ENST00000494841 ZNF710Q8N1W2 664 aa12.51□□□□□ -0.41
RPGR-210ENST00000494841 EIF4G3O43432 1585 aaKnown RBP12.51□□□□□ -0.41
RPGR-210ENST00000494841 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
RPGR-210ENST00000494841 ARSIQ5FYB1 569 aa12.5□□□□□ -0.41
RPGR-210ENST00000494841 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
RPGR-210ENST00000494841 RUSC2Q8N2Y8 1516 aa12.49□□□□□ -0.41
RPGR-210ENST00000494841 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPGR-210ENST00000494841 GAPVD1Q14C86 1478 aa12.48□□□□□ -0.41
RPGR-210ENST00000494841 MLLT3P42568 568 aaPredicted RBP12.48□□□□□ -0.41
RPGR-210ENST00000494841 ANO8Q9HCE9 1232 aaPredicted RBP12.47□□□□□ -0.41
RPGR-210ENST00000494841 ZNF316A6NFI3 1004 aaPredicted RBP12.46□□□□□ -0.41
RPGR-210ENST00000494841 ABCA5Q8WWZ7 1642 aa12.46□□□□□ -0.41
RPGR-210ENST00000494841 NUDT7P0C024 238 aa12.45□□□□□ -0.42
RPGR-210ENST00000494841 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
RPGR-210ENST00000494841 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
RPGR-210ENST00000494841 PTGER2P43116 358 aa12.44□□□□□ -0.42
RPGR-210ENST00000494841 FAM9AQ8IZU1 332 aaPredicted RBP12.44□□□□□ -0.42
RPGR-210ENST00000494841 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
RPGR-210ENST00000494841 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
RPGR-210ENST00000494841 SNAPC4Q5SXM2 1469 aa12.41□□□□□ -0.42
RPGR-210ENST00000494841 DDX12PQ92771 950 aa12.41□□□□□ -0.42
RPGR-210ENST00000494841 IGF1RP08069 1367 aa12.41□□□□□ -0.42
RPGR-210ENST00000494841 ST18O60284 1047 aa12.39□□□□□ -0.43
RPGR-210ENST00000494841 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
RPGR-210ENST00000494841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
RPGR-210ENST00000494841 SMYD5Q6GMV2 418 aa12.37□□□□□ -0.43
RPGR-210ENST00000494841 CHMP7Q8WUX9 453 aaPredicted RBP12.37□□□□□ -0.43
RPGR-210ENST00000494841 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
RPGR-210ENST00000494841 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
RPGR-210ENST00000494841 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
RPGR-210ENST00000494841 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
RPGR-210ENST00000494841 LHX6Q9UPM6 363 aa12.36□□□□□ -0.43
RPGR-210ENST00000494841 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
RPGR-210ENST00000494841 OSBPP22059 807 aa12.35□□□□□ -0.43
RPGR-210ENST00000494841 FOSBP53539 338 aa12.34□□□□□ -0.43
RPGR-210ENST00000494841 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
RPGR-210ENST00000494841 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
RPGR-210ENST00000494841 CHD1O14646 1710 aa12.34□□□□□ -0.43
RPGR-210ENST00000494841 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
RPGR-210ENST00000494841 PHF14O94880 888 aa12.33□□□□□ -0.44
RPGR-210ENST00000494841 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
RPGR-210ENST00000494841 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
RPGR-210ENST00000494841 FHAD1B1AJZ9 1412 aa12.33□□□□□ -0.44
RPGR-210ENST00000494841 ADAMTS12P58397 1594 aa12.33□□□□□ -0.44
RPGR-210ENST00000494841 SYNJ2O15056 1496 aa12.33□□□□□ -0.44
RPGR-210ENST00000494841 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
RPGR-210ENST00000494841 ZNF454Q8N9F8 522 aa12.31□□□□□ -0.44
RPGR-210ENST00000494841 EEA1Q15075 1411 aa12.3□□□□□ -0.44
RPGR-210ENST00000494841 EPAS1Q99814 870 aa12.3□□□□□ -0.44
RPGR-210ENST00000494841 CUL7Q14999 1698 aa12.29□□□□□ -0.44
RPGR-210ENST00000494841 TYW1BQ6NUM6 668 aa12.29□□□□□ -0.44
RPGR-210ENST00000494841 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
RPGR-210ENST00000494841 GRIN2AQ12879 1464 aa12.27□□□□□ -0.44
RPGR-210ENST00000494841 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
RPGR-210ENST00000494841 EMP3P54852 163 aa12.27□□□□□ -0.45
RPGR-210ENST00000494841 EN1Q05925 392 aaPredicted RBP12.27□□□□□ -0.45
RPGR-210ENST00000494841 FBXW7Q969H0 707 aa12.26□□□□□ -0.45
RPGR-210ENST00000494841 ZDHHC16Q969W1 377 aa12.26□□□□□ -0.45
RPGR-210ENST00000494841 PRXQ9BXM0 1461 aa12.26□□□□□ -0.45
RPGR-210ENST00000494841 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
RPGR-210ENST00000494841 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
RPGR-210ENST00000494841 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
RPGR-210ENST00000494841 ADAM33Q9BZ11 813 aa12.24□□□□□ -0.45
RPGR-210ENST00000494841 ERBB3P21860 1342 aa12.23□□□□□ -0.45
RPGR-210ENST00000494841 CEP170Q5SW79 1584 aa12.22□□□□□ -0.45
RPGR-210ENST00000494841 MAP3K7O43318 606 aa12.22□□□□□ -0.45
RPGR-210ENST00000494841 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
RPGR-210ENST00000494841 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
RPGR-210ENST00000494841 GPR37O15354 613 aa12.21□□□□□ -0.45
RPGR-210ENST00000494841 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
RPGR-210ENST00000494841 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.45
RPGR-210ENST00000494841 CDHR5Q9HBB8 845 aa12.21□□□□□ -0.45
RPGR-210ENST00000494841 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
RPGR-210ENST00000494841 NUP160Q12769 1436 aa12.2□□□□□ -0.46
RPGR-210ENST00000494841 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
RPGR-210ENST00000494841 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
RPGR-210ENST00000494841 ZC3H15Q8WU90 426 aaKnown RBP12.19□□□□□ -0.46
RPGR-210ENST00000494841 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
RPGR-210ENST00000494841 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
RPGR-210ENST00000494841 KIF21BO75037 1637 aa12.18□□□□□ -0.46
RPGR-210ENST00000494841 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
RPGR-210ENST00000494841 PRKCSHP14314 528 aaPredicted RBP12.17□□□□□ -0.46
RPGR-210ENST00000494841 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
RPGR-210ENST00000494841 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
RPGR-210ENST00000494841 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
RPGR-210ENST00000494841 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
RPGR-210ENST00000494841 RANGAP1P46060 587 aaPredicted RBP12.15□□□□□ -0.46
RPGR-210ENST00000494841 PTGDRQ13258 359 aa12.15□□□□□ -0.46
RPGR-210ENST00000494841 NPDC1Q9NQX5 325 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms