RNA–Protein interactions for RNA: ENST00000494120.1

C1orf109-211, Transcript of chromosome 1 open reading frame 109, humanhuman

TSL 1 (best)

Gene C1orf109, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf109-211ENST00000494120 NBR1Q14596 966 aa20.34■□□□□ 0.85
C1orf109-211ENST00000494120 SHANK2Q9UPX8 1470 aa20.33■□□□□ 0.85
C1orf109-211ENST00000494120 IPO9Q96P70 1041 aaKnown RBP20.33■□□□□ 0.85
C1orf109-211ENST00000494120 SALL2Q9Y467 1007 aaPredicted RBP20.33■□□□□ 0.84
C1orf109-211ENST00000494120 MAGI1Q96QZ7 1491 aaPredicted RBP20.32■□□□□ 0.84
C1orf109-211ENST00000494120 ABCC10Q5T3U5 1492 aa20.32■□□□□ 0.84
C1orf109-211ENST00000494120 RRP1P56182 461 aaKnown RBP20.32■□□□□ 0.84
C1orf109-211ENST00000494120 SYNJ2O15056 1496 aa20.31■□□□□ 0.84
C1orf109-211ENST00000494120 CDC42BPAQ5VT25 1732 aa20.3■□□□□ 0.84
C1orf109-211ENST00000494120 KDM5DQ9BY66 1539 aa20.3■□□□□ 0.84
C1orf109-211ENST00000494120 EXOC6Q8TAG9 804 aa20.3■□□□□ 0.84
C1orf109-211ENST00000494120 ATP10BO94823 1461 aa20.29■□□□□ 0.84
C1orf109-211ENST00000494120 RCAN3Q9UKA8 241 aa20.29■□□□□ 0.84
C1orf109-211ENST00000494120 PTPRGP23470 1445 aa20.29■□□□□ 0.84
C1orf109-211ENST00000494120 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
C1orf109-211ENST00000494120 ZBTB47Q9UFB7 747 aaPredicted RBP20.26■□□□□ 0.83
C1orf109-211ENST00000494120 NBPF1Q3BBV0 1214 aa20.25■□□□□ 0.83
C1orf109-211ENST00000494120 RGL3Q3MIN7 710 aa20.25■□□□□ 0.83
C1orf109-211ENST00000494120 PARD3Q8TEW0 1356 aa20.24■□□□□ 0.83
C1orf109-211ENST00000494120 NUP160Q12769 1436 aa20.24■□□□□ 0.83
C1orf109-211ENST00000494120 PER1O15534 1290 aaPredicted RBP20.24■□□□□ 0.83
C1orf109-211ENST00000494120 ABCA8O94911 1581 aa20.23■□□□□ 0.83
C1orf109-211ENST00000494120 PDE3BQ13370 1112 aa20.22■□□□□ 0.83
C1orf109-211ENST00000494120 E9PCH4 1651 aa20.22■□□□□ 0.83
C1orf109-211ENST00000494120 PRAG1Q86YV5 1406 aa20.22■□□□□ 0.83
C1orf109-211ENST00000494120 CDCA7LQ96GN5 454 aa20.22■□□□□ 0.83
C1orf109-211ENST00000494120 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
C1orf109-211ENST00000494120 FAM135AQ9P2D6 1515 aa20.2■□□□□ 0.82
C1orf109-211ENST00000494120 TCERG1O14776 1098 aaKnown RBP20.19■□□□□ 0.82
C1orf109-211ENST00000494120 CC2D1BQ5T0F9 858 aaKnown RBP20.19■□□□□ 0.82
C1orf109-211ENST00000494120 ARHGEF5Q12774 1597 aa20.17■□□□□ 0.82
C1orf109-211ENST00000494120 NPM2Q86SE8 214 aaKnown RBP20.17■□□□□ 0.82
C1orf109-211ENST00000494120 ERCC6Q03468 1493 aa20.16■□□□□ 0.82
C1orf109-211ENST00000494120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.16■□□□□ 0.82
C1orf109-211ENST00000494120 CCDC141Q6ZP82 1450 aa20.16■□□□□ 0.82
C1orf109-211ENST00000494120 PDE4AP27815 886 aa20.16■□□□□ 0.82
C1orf109-211ENST00000494120 TESK2Q96S53 571 aa20.15■□□□□ 0.82
C1orf109-211ENST00000494120 TRPM1Q7Z4N2 1603 aa20.15■□□□□ 0.82
C1orf109-211ENST00000494120 PLIN1O60240 522 aa20.14■□□□□ 0.82
C1orf109-211ENST00000494120 RSPH4AQ5TD94 716 aa20.14■□□□□ 0.82
C1orf109-211ENST00000494120 PANK3Q9H999 370 aa20.14■□□□□ 0.82
C1orf109-211ENST00000494120 PLA2R1Q13018 1463 aa20.14■□□□□ 0.81
C1orf109-211ENST00000494120 GPRASP1Q5JY77 1395 aa20.14■□□□□ 0.81
C1orf109-211ENST00000494120 DISP3Q9P2K9 1392 aa20.14■□□□□ 0.81
C1orf109-211ENST00000494120 WASHC2CQ9Y4E1 1318 aa20.14■□□□□ 0.81
C1orf109-211ENST00000494120 RTL5Q5HYW3 569 aaPredicted RBP20.13■□□□□ 0.81
C1orf109-211ENST00000494120 BACH2Q9BYV9 841 aa20.12■□□□□ 0.81
C1orf109-211ENST00000494120 SAMD9LQ8IVG5 1584 aa20.11■□□□□ 0.81
C1orf109-211ENST00000494120 A2MP01023 1474 aa20.11■□□□□ 0.81
C1orf109-211ENST00000494120 COL17A1Q9UMD9 1497 aaPredicted RBP20.1■□□□□ 0.81
C1orf109-211ENST00000494120 MS4A1P11836 297 aa20.1■□□□□ 0.81
C1orf109-211ENST00000494120 BLMP54132 1417 aaPredicted RBP20.07■□□□□ 0.8
C1orf109-211ENST00000494120 ERBINQ96RT1 1412 aa20.07■□□□□ 0.8
C1orf109-211ENST00000494120 TMF1P82094 1093 aa20.07■□□□□ 0.8
C1orf109-211ENST00000494120 CDC42BPBQ9Y5S2 1711 aa20.06■□□□□ 0.8
C1orf109-211ENST00000494120 CRBNQ96SW2 442 aa20.06■□□□□ 0.8
C1orf109-211ENST00000494120 INSRP06213 1382 aa20.05■□□□□ 0.8
C1orf109-211ENST00000494120 PRDM15P57071 1507 aaPredicted RBP20.05■□□□□ 0.8
C1orf109-211ENST00000494120 SKAP1Q86WV1 359 aa20.05■□□□□ 0.8
C1orf109-211ENST00000494120 SYCP2Q9BX26 1530 aa20.04■□□□□ 0.8
C1orf109-211ENST00000494120 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
C1orf109-211ENST00000494120 PREX2Q70Z35 1606 aa20.03■□□□□ 0.8
C1orf109-211ENST00000494120 PLEKHH2Q8IVE3 1493 aa20.02■□□□□ 0.8
C1orf109-211ENST00000494120 LAS1LQ9Y4W2 734 aaKnown RBP20.01■□□□□ 0.79
C1orf109-211ENST00000494120 C20orf194Q5TEA3 1177 aa20■□□□□ 0.79
C1orf109-211ENST00000494120 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
C1orf109-211ENST00000494120 ZMYM4Q5VZL5 1548 aa20■□□□□ 0.79
C1orf109-211ENST00000494120 UNC13BO14795 1591 aa20■□□□□ 0.79
C1orf109-211ENST00000494120 LAMC1P11047 1609 aa20■□□□□ 0.79
C1orf109-211ENST00000494120 ARHGAP5Q13017 1502 aa20■□□□□ 0.79
C1orf109-211ENST00000494120 NEFMP07197 916 aa19.96■□□□□ 0.79
C1orf109-211ENST00000494120 KNSTRNQ9Y448 316 aa19.96■□□□□ 0.79
C1orf109-211ENST00000494120 MAST1Q9Y2H9 1570 aa19.96■□□□□ 0.79
C1orf109-211ENST00000494120 EIF2AK4Q9P2K8 1649 aaKnown RBP19.95■□□□□ 0.78
C1orf109-211ENST00000494120 ATP10AO60312 1499 aa19.95■□□□□ 0.78
C1orf109-211ENST00000494120 PPP2R1AP30153 589 aa19.95■□□□□ 0.78
C1orf109-211ENST00000494120 IQGAP3Q86VI3 1631 aa19.95■□□□□ 0.78
C1orf109-211ENST00000494120 TTC37Q6PGP7 1564 aa19.95■□□□□ 0.78
C1orf109-211ENST00000494120 MAGI2Q86UL8 1455 aa19.94■□□□□ 0.78
C1orf109-211ENST00000494120 WDR43Q15061 677 aaKnown RBP eCLIP19.93■□□□□ 0.78
C1orf109-211ENST00000494120 PLEKHH1Q9ULM0 1364 aa19.93■□□□□ 0.78
C1orf109-211ENST00000494120 DUSP27Q5VZP5 1158 aa19.93■□□□□ 0.78
C1orf109-211ENST00000494120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.93■□□□□ 0.78
C1orf109-211ENST00000494120 MYO5CQ9NQX4 1742 aa19.93■□□□□ 0.78
C1orf109-211ENST00000494120 WDR7Q9Y4E6 1490 aa19.92■□□□□ 0.78
C1orf109-211ENST00000494120 USP35Q9P2H5 1018 aa19.92■□□□□ 0.78
C1orf109-211ENST00000494120 KDM2BQ8NHM5 1336 aa19.92■□□□□ 0.78
C1orf109-211ENST00000494120 AMER1Q5JTC6 1135 aaPredicted RBP19.91■□□□□ 0.78
C1orf109-211ENST00000494120 PLXNC1O60486 1568 aa19.9■□□□□ 0.78
C1orf109-211ENST00000494120 DUOX2Q9NRD8 1548 aa19.9■□□□□ 0.78
C1orf109-211ENST00000494120 PPM1GO15355 546 aaPredicted RBP19.89■□□□□ 0.77
C1orf109-211ENST00000494120 GOLGA2Q08379 1002 aa19.89■□□□□ 0.77
C1orf109-211ENST00000494120 ZNF521Q96K83 1311 aa19.88■□□□□ 0.77
C1orf109-211ENST00000494120 DDRGK1Q96HY6 314 aa19.88■□□□□ 0.77
C1orf109-211ENST00000494120 CENPQQ7L2Z9 268 aaPredicted RBP19.88■□□□□ 0.77
C1orf109-211ENST00000494120 RNF17Q9BXT8 1623 aaKnown RBP19.85■□□□□ 0.77
C1orf109-211ENST00000494120 CDCA8Q53HL2 280 aa19.85■□□□□ 0.77
C1orf109-211ENST00000494120 SLFN5Q08AF3 891 aa19.83■□□□□ 0.77
C1orf109-211ENST00000494120 SLC4A3P48751 1232 aa19.83■□□□□ 0.76
C1orf109-211ENST00000494120 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms